Ggra4830.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra4830.t1
Unique NameGgra4830.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length90
Homology
BLAST of Ggra4830.t1 vs. uniprot
Match: A0A2V3J3L2 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3L2_9FLOR)

HSP 1 Score: 116 bits (291), Expect = 2.710e-32
Identity = 52/58 (89.66%), Postives = 55/58 (94.83%), Query Frame = 0
Query:    1 MASGHAGRQWLEILKFSVYVGTPIAATIYLGTGAYPYLEKIIHNTSYIVYPPEGEAPP 58
            MASGHA RQWLE LKFSVYV TPIAAT+YLGTGAYPYLE++IHNTSYIVYPPEGEAPP
Sbjct:    1 MASGHAARQWLEALKFSVYVVTPIAATVYLGTGAYPYLERMIHNTSYIVYPPEGEAPP 58          
BLAST of Ggra4830.t1 vs. uniprot
Match: A0A1X6NRP5 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NRP5_PORUM)

HSP 1 Score: 75.1 bits (183), Expect = 1.270e-15
Identity = 35/64 (54.69%), Postives = 43/64 (67.19%), Query Frame = 0
Query:    8 RQWLEILKFSVYVGTPIAATIYLGTGAYPYLEKIIHNTSYIVYPPEGEAPPTSANEIKIAREER 71
            R+ LE  KFSVYV  PI A+ + G+GAYPYLE+II   SY+VYPPEG APP      ++   ER
Sbjct:   21 RRRLEGFKFSVYVLLPIGASYFFGSGAYPYLERIIQQRSYVVYPPEGPAPPKPNEMSRLVERER 84          
BLAST of Ggra4830.t1 vs. uniprot
Match: A0A443NR25 (Sporulation-specific 71 n=1 Tax=Cinnamomum micranthum f. kanehirae TaxID=337451 RepID=A0A443NR25_9MAGN)

HSP 1 Score: 56.2 bits (134), Expect = 1.350e-8
Identity = 29/72 (40.28%), Postives = 43/72 (59.72%), Query Frame = 0
Query:    1 MASGHAGRQWLEILKFSVYVGTPIAATIYLGTGAYPYLEKIIHNTSYIVYPPEGEAPPTSANEIKIAREERR 72
            M+S    +  LEI KF++YV  PI   +Y       +L+K++ N SY+VYPPEG  PP+     ++ARE R+
Sbjct:    1 MSSLGTSKGILEIAKFALYVSVPITL-MYSFAHNSEFLQKVVRNRSYVVYPPEGPRPPSPEELREMAREMRK 71          
BLAST of Ggra4830.t1 vs. uniprot
Match: uncharacterized protein LOC108200837 n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=UPI0007EFEE86 (uncharacterized protein LOC108200837 n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=UPI0007EFEE86)

HSP 1 Score: 50.4 bits (119), Expect = 2.620e-6
Identity = 25/69 (36.23%), Postives = 38/69 (55.07%), Query Frame = 0
Query:    1 MASGHAGRQWLEILKFSVYVGTPIAATIYLGTGAYPYLEKIIHNTSYIVYPPEGEAPPTSANEIKIARE 69
            M+S    +  LE+ KF+VYV  PI    +     +  L++ +    Y+VYPPEGE PP+     ++ARE
Sbjct:    1 MSSLGTSKGVLEVAKFAVYVTVPIGLMYFFANNTHN-LQRFMGARQYVVYPPEGERPPSPEEIREMARE 68          
BLAST of Ggra4830.t1 vs. uniprot
Match: A0A8J5XWM3 (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XWM3_DIALT)

HSP 1 Score: 50.1 bits (118), Expect = 4.350e-6
Identity = 29/79 (36.71%), Postives = 42/79 (53.16%), Query Frame = 0
Query:    1 MASGHAGRQW---LEILKFSVYVGTPIAATIYLGTGAYPYLEKIIHNTSYIVYPPEGEAPPTSANEIKIAREERRAKYR 76
            MA+    + W    E  K ++YV  P+         A   +EKI+ N  Y++YPPEGE PPT+ +++K    ER AK R
Sbjct:    1 MATRFRSKFWSHAFENAKVALYVFCPVVTVFVFSQPAM--VEKIVTNRMYVLYPPEGERPPTTLDDVK----ERAAKIR 73          
BLAST of Ggra4830.t1 vs. uniprot
Match: A0A059LMS6 (Uncharacterized protein n=1 Tax=Helicosporidium sp. ATCC 50920 TaxID=1291522 RepID=A0A059LMS6_9CHLO)

HSP 1 Score: 50.8 bits (120), Expect = 5.410e-6
Identity = 25/60 (41.67%), Postives = 35/60 (58.33%), Query Frame = 0
Query:   15 KFSVYVGTPIAATIYLGTGAYPYLEKIIHNTSYIVYPPEGEAPPTSANEIKIAREERRAK 74
            KF+VYV  P+  T  L      +L  +I N SY+VYPPEGE PP++     +   ER+A+
Sbjct:   66 KFAVYVSVPVGLTAVLVYKP-EFLNSVIENRSYVVYPPEGERPPSAEQLKALVAAERKAR 124          
The following BLAST results are available for this feature:
BLAST of Ggra4830.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A2V3J3L22.710e-3289.66Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A1X6NRP51.270e-1554.69Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A443NR251.350e-840.28Sporulation-specific 71 n=1 Tax=Cinnamomum micrant... [more]
uncharacterized protein LOC108200837 n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=UPI0007EFEE862.620e-636.23uncharacterized protein LOC108200837 n=1 Tax=Daucu... [more]
A0A8J5XWM34.350e-636.71Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]
A0A059LMS65.410e-641.67Uncharacterized protein n=1 Tax=Helicosporidium sp... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018625Protein Pet100PFAMPF09803Pet100coord: 9..77
e-value: 5.8E-7
score: 29.9
NoneNo IPR availableTMHMMTMhelixcoord: 13..35

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000090_piloncontigtig00000090_pilon:236604..236937 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra4830.t1Ggra4830.t1Gracilaria gracilis GNS1m malemRNAtig00000090_pilon 236604..236937 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra4830.t1 ID=Ggra4830.t1|Name=Ggra4830.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=90bp
MASGHAGRQWLEILKFSVYVGTPIAATIYLGTGAYPYLEKIIHNTSYIVY
PPEGEAPPTSANEIKIAREERRAKYRRHSSESQMNEKME*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018625Pet100