Ggra4728.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra4728.t1
Unique NameGgra4728.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length498
Homology
BLAST of Ggra4728.t1 vs. uniprot
Match: A0A2V3J3P4 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3P4_9FLOR)

HSP 1 Score: 226 bits (576), Expect = 1.080e-66
Identity = 137/297 (46.13%), Postives = 181/297 (60.94%), Query Frame = 0
Query:    1 MSRNGSMEDPLLAGLSRLSTSHTNQQ---RASNPPHASASTPAPQVTNRLQLTEPTSALEHRRSRQPPPSTHSRQGSQLANPNTSGGQAAHELYAERNSTPTLNQLSRRRTTSESSSRHTSGSFPHRLSSSDQSTNQQSAPTTIAPLNPLHRSEIYELIERATGLGRPTDGDPAVADQLLHLIKTGSIPPRLICEYVVAGSGPNEVKVNARALWLMHYLMVEGGPLVLPEVVQAPDGRNPPAVKLVLNVLRSFGYESDAEGLDVLHDDEKLRTMSFPPDKQ-IPGDALQQSKGERTY 293
            MS N  ++DPLLAGLSRLSTS    Q   +        +S              P ++ EH +  Q  P+  +           +GG +A    AE +S+   +    RR+TS++SS+  S SF    S+  +  +Q   PT + PL PLHRS+  ELIER TGLGRP+DGDP+ A++LL LI+ GS+PP  + EY+VAGSGPNEVKVNAR LWLMHYLMV GGP ++PE VQ    RN PA+ LVL VLRSFGY  + + LDVL DDEK+R M+   D+  +P D+LQ+S G+R +
Sbjct:    1 MSTNNVIDDPLLAGLSRLSTSRNRPQVNIQIDRKTQTVSSQQPXXXXXXXXXXXPAASAEHPQREQVDPARRA---------TNAGGLSAFSSNAEHSSSSPRHF---RRSTSDASSQQASDSFSKHGSTQFEQPSQHLRPT-VKPLIPLHRSDTCELIERTTGLGRPSDGDPSGAERLLQLIRNGSLPPHTVLEYIVAGSGPNEVKVNARVLWLMHYLMVHGGPDMVPEAVQPFRKRNAPALHLVLAVLRSFGYIEETDALDVLQDDEKVRAMTLSTDRNNVPTDSLQRSWGKRLW 284          
BLAST of Ggra4728.t1 vs. uniprot
Match: A0A2V3J478 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J478_9FLOR)

HSP 1 Score: 158 bits (399), Expect = 5.200e-43
Identity = 80/124 (64.52%), Postives = 97/124 (78.23%), Query Frame = 0
Query:  368 MTAAAHRLQRGKVAFSICLQALADACNAYSYALYLRTKVDSRGMEEFDLEIQRDVLAFLLRRWEHKGGKHFERLKRYVDERVYDLIMNVSSVAVRPESRHRREIEIEVTSFEALHKSFLYLRDR 491
            MTAAA RLQRG+V + I L ALADACNAYSYALYLR KV+    E F LE+QR  LA LLR+WE + G   E L+ ++D+RVY++I+N ++  VRPESRHRREIEIEVTSFEALH++F YLR R
Sbjct:    1 MTAAAWRLQRGRVPYDISLLALADACNAYSYALYLRKKVEPGEDEHFTLELQRGKLAVLLRKWEQREGMGLELLRSHLDQRVYNMILNANAAIVRPESRHRREIEIEVTSFEALHETFAYLRHR 124          
The following BLAST results are available for this feature:
BLAST of Ggra4728.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J3P41.080e-6646.13Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J4785.200e-4364.52Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 16..52
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 66..85
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..144
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 92..143

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000065_piloncontigtig00000065_pilon:80104..81597 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra4728.t1Ggra4728.t1Gracilaria gracilis GNS1m malemRNAtig00000065_pilon 80104..81597 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra4728.t1 ID=Ggra4728.t1|Name=Ggra4728.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=498bp
MSRNGSMEDPLLAGLSRLSTSHTNQQRASNPPHASASTPAPQVTNRLQLT
EPTSALEHRRSRQPPPSTHSRQGSQLANPNTSGGQAAHELYAERNSTPTL
NQLSRRRTTSESSSRHTSGSFPHRLSSSDQSTNQQSAPTTIAPLNPLHRS
EIYELIERATGLGRPTDGDPAVADQLLHLIKTGSIPPRLICEYVVAGSGP
NEVKVNARALWLMHYLMVEGGPLVLPEVVQAPDGRNPPAVKLVLNVLRSF
GYESDAEGLDVLHDDEKLRTMSFPPDKQIPGDALQQSKGERTYEAAAVET
YAIALGRKAWFHYRYSVVEVNYSLDRFYRAWHVENDCDPMMHAKNEEVVK
LTRSKGALQDMCLLVCAMTAAAHRLQRGKVAFSICLQALADACNAYSYAL
YLRTKVDSRGMEEFDLEIQRDVLAFLLRRWEHKGGKHFERLKRYVDERVY
DLIMNVSSVAVRPESRHRREIEIEVTSFEALHKSFLYLRDRNKFCAS*
back to top