Ggra4658.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra4658.t1
Unique NameGgra4658.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length136
Homology
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BLAST of Ggra4658.t1 vs. uniprot
Match: A0A2V3J6K6 (Transmembrane protein 53 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6K6_9FLOR)

HSP 1 Score: 147 bits (370), Expect = 6.990e-41
Identity = 80/132 (60.61%), Postives = 94/132 (71.21%), Query Frame = 0 
Query:    1 MPAVEQYTKKTNTGNAVLERILTPRPSAAPPPPAVLFGWGGASMPHLAKYAQLYEVMRYNCVQLVTPPSVIFAMRPVANAKFPLSVLRILPAHARLTDGGLVLHKFSNAGATLSPHLSHSFGATNRSHVVGP 132
            M  VE+Y KKTNTG+ V+ RIL P  ++AP    V+ GW GAS+ HLAKYA +YE M YN V L  PPSV+FAMRP+A+AKF LS LRIL A  RLT GGLV HK SNAGAT+SPHLS  F   + S +V P
Sbjct:    1 MEGVEEYKKKTNTGDTVIIRILNPSSTSAPT--VVVLGWLGASIKHLAKYAAVYESMSYNTVCLSCPPSVVFAMRPIASAKFLLSALRILAADDRLTAGGLVFHKLSNAGATVSPHLSDFFAGAS-SDLVKP 129
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BLAST of Ggra4658.t1 vs. uniprot
Match: R7QBB1 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QBB1_CHOCR)

HSP 1 Score: 107 bits (268), Expect = 1.010e-25
Identity = 58/130 (44.62%), Postives = 77/130 (59.23%), Query Frame = 0 
Query:    4 VEQYTKKTNTGNAVLERILTPRPSAA------------PPPPAVLFGWGGASMPHLAKYAQLYEVMRYNCVQLVTPPSVIFAMRPVANAKFPLSVLRILPAHARLTDGGLVLHKFSNAGATLSPHLSHSF 121
            +E+Y KKTNTG+ V  R+  P+  A             P P AVL GW  A   +L+KY  +YE M YN VQ++ P SV+F ++P   A F LS+LRI+ A + LT+GG+V   FSN GA  +PHLS  F
Sbjct:    1 MEEYKKKTNTGDDVFIRLQKPKEPAPGTIPDDGQDHSLPRPTAVLLGWFAAKHKNLSKYGAIYEDMGYNVVQVIAPASVVFPLKPQYTAAFTLSLLRIIAADSHLTNGGIVFMMFSNGGAINAPHLSRMF 130
The following BLAST results are available for this feature:
BLAST of Ggra4658.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J6K66.990e-4160.61Transmembrane protein 53 n=1 Tax=Gracilariopsis ch... [more]
R7QBB11.010e-2544.62Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008547Protein of unknown function DUF829, TMEM53PFAMPF05705DUF829coord: 34..117
e-value: 4.1E-9
score: 36.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000061_piloncontigtig00000061_pilon:576028..576435 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra4658.t1Ggra4658.t1Gracilaria gracilis GNS1m malemRNAtig00000061_pilon 576028..576435 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra4658.t1 ID=Ggra4658.t1|Name=Ggra4658.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=136bp
MPAVEQYTKKTNTGNAVLERILTPRPSAAPPPPAVLFGWGGASMPHLAKY
AQLYEVMRYNCVQLVTPPSVIFAMRPVANAKFPLSVLRILPAHARLTDGG
LVLHKFSNAGATLSPHLSHSFGATNRSHVVGPPSS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008547DUF829_TMEM53