Ggra4600.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra4600.t1
Unique NameGgra4600.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length143
Homology
BLAST of Ggra4600.t1 vs. uniprot
Match: A0A2V3IM54 (Proteasome assembly chaperone 3 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IM54_9FLOR)

HSP 1 Score: 232 bits (591), Expect = 2.230e-76
Identity = 119/142 (83.80%), Postives = 129/142 (90.85%), Query Frame = 0
Query:    1 MVGTIVPSARQNAIPVTAPSDDSGHNAHFIKSATVQICDRRTDFLVQPFSDRIFVLVTQREKMGTTLSASKEVTIAGAESFSVQTLVGIRDIPELELCARAIISKISEDGCPKPLLISLALRDHSMRTIRAVIEKVTELRVW 142
            MVG + P+A  + IPV+AP+DD GHNAHFIKSATV+I  R TDFLVQPFSDRIFVLVTQ  KMGTTLSASKEVTIAGAESFSVQTLVGIRD+PELELCARA+ISKIS+DGC KPLLISLAL+DHSMRTIRAVIEKV ELRVW
Sbjct:    1 MVGPLDPNAHSHDIPVSAPADDGGHNAHFIKSATVEINGRSTDFLVQPFSDRIFVLVTQMRKMGTTLSASKEVTIAGAESFSVQTLVGIRDMPELELCARAVISKISDDGCSKPLLISLALKDHSMRTIRAVIEKVGELRVW 142          
BLAST of Ggra4600.t1 vs. uniprot
Match: R7QMC1 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QMC1_CHOCR)

HSP 1 Score: 164 bits (416), Expect = 9.940e-50
Identity = 81/142 (57.04%), Postives = 101/142 (71.13%), Query Frame = 0
Query:    1 MVGTIVPSARQNAIPVTAPSDDSGHNAHFIKSATVQICDRRTDFLVQPFSDRIFVLVTQREKMGTTLSASKEVTIAGAESFSVQTLVGIRDIPELELCARAIISKISEDGCPKPLLISLALRDHSMRTIRAVIEKVTELRVW 142
            MVG +       +IP+T P +D+ HNA FIK+    I    TDF+VQPFSDRIF++VTQ  KMGT +SA KE  I GA+S+SV  L+G R++PELELCAR ++  I  DGC KPLLISLAL+DHS+ TI+AVI KV  LR W
Sbjct:    1 MVGPLQSPGASASIPITKPDNDAKHNACFIKTGAEDIAGHHTDFVVQPFSDRIFIIVTQLGKMGTMISAEKECAIGGAQSYSVTVLMGKREVPELELCARQVLELIENDGCAKPLLISLALKDHSIETIKAVIAKVKSLRAW 142          
BLAST of Ggra4600.t1 vs. uniprot
Match: A0A7S2B7E1 (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B7E1_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 2.690e-18
Identity = 51/120 (42.50%), Postives = 72/120 (60.00%), Query Frame = 0
Query:   17 TAPSDDSGHNAHFIKSATVQICDR-RTDFLVQPFSDRIFVLVTQREKMGTTLSASKEVTIAGAESFSVQTLVGIRDIPELELCARAIISKISEDGCPKPLLISLALRDHSMR--TIRAVI 133
            T P+  S     F+   T  I D   TD +VQ F+DR+FV VTQ +K+GT L A  E +  G + F + TLVG RD P L L AR +I +I++ GC KPLL++++L+D      T +A+I
Sbjct:    7 TTPASSS-----FVTRQTAAIIDGIHTDIVVQSFADRVFVTVTQIQKIGTMLFAVSEDSSMGEKRFDISTLVGRRDDPLLTLYARQLIEQIAKTGCDKPLLLAISLKDEGRESSTFQAII 121          
BLAST of Ggra4600.t1 vs. uniprot
Match: A0A6T5UGU5 (Hypothetical protein n=1 Tax=Polyblepharides amylifera TaxID=1486889 RepID=A0A6T5UGU5_9CHLO)

HSP 1 Score: 83.6 bits (205), Expect = 5.240e-18
Identity = 41/102 (40.20%), Postives = 71/102 (69.61%), Query Frame = 0
Query:   42 TDFLVQPFSDRIFVLVTQREKMGTTLSASKEVTIAGA-ESFSVQTLVGIRDIPELELCARAIISKISEDGCPKPLLISLALRDHSMRTIRAVIEKVTELRVW 142
            T+FL+  + +R+ V+VTQ  ++GT L A  E +   + ES++V +L+G RD P LE+CAR ++  +++ GC +PLL++L L++HSM T++++I  V +  VW
Sbjct:   22 TEFLITGYDNRVMVMVTQLGRVGTVLQAKCESSPGSSGESYTVSSLLGRRDEPLLEICARRMMELLTDSGCRRPLLLTLGLKNHSMGTMKSIIVLVLKHPVW 123          
BLAST of Ggra4600.t1 vs. uniprot
Match: A9NRF5 (Uncharacterized protein n=1 Tax=Picea sitchensis TaxID=3332 RepID=A9NRF5_PICSI)

HSP 1 Score: 83.6 bits (205), Expect = 5.240e-18
Identity = 46/112 (41.07%), Postives = 65/112 (58.04%), Query Frame = 0
Query:   31 KSATVQICDRRTDFLVQPFSDRIFVLVTQREKMGTTLSASKEVTIAGAESFSVQTLVGIRDIPELELCARAIISKISEDGCPKPLLISLALRDHSMRTIRAVIEKVTELRVW 142
            K  T  I   +TD ++  + D I V+ +Q   +GT L A KE   A    F+V  L G RD P L  CAR +I  IS+ G  +PL+IS+ L+DHS+ T++ +IE V E +VW
Sbjct:   12 KQLTTTIKGIKTDLVLCSYDDHILVMASQIGTVGTMLHARKEEGFATNPIFNVSVLFGKRDEPMLVACARQLIENISKAGSSRPLVISIGLKDHSVETLKGIIEVVIENKVW 123          
BLAST of Ggra4600.t1 vs. uniprot
Match: A0A2P6U586 (Proteasome assembly chaperone 3 n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6U586_CHLSO)

HSP 1 Score: 78.6 bits (192), Expect = 5.320e-16
Identity = 43/129 (33.33%), Postives = 74/129 (57.36%), Query Frame = 0
Query:   16 VTAPSDDSGHNAHFIKSATVQICDRRTDFLVQPFSDRIFVLVTQREKMGTTLSASKEVTIAGAESFSVQTLVGIRDIPELELCARAIISKISEDGCPKPLLISLALRDHSMR--TIRAVIEKVTELRVW 142
            +TAP   S       ++ T  +  R T+F +  ++DR+ V+ +Q   +G+ L+A KE  + G  ++ V TL+G RD P  ELCAR +  ++ + GC +PLL+ LAL   ++    ++ V+++V E  VW
Sbjct:    1 MTAPQSSSSLPFR-TETFTANVEGRPTEFALTGYADRLLVVASQLGSLGSILAAEKETVLGGGSTYRVDTLLGRRDEPLAELCARQLAERLCDAGCDRPLLLCLALERATLTKAAVQQVVQQVLEHPVW 128          
BLAST of Ggra4600.t1 vs. uniprot
Match: A0A835MIV9 (Uncharacterized protein n=1 Tax=Coptis chinensis TaxID=261450 RepID=A0A835MIV9_9MAGN)

HSP 1 Score: 73.9 bits (180), Expect = 2.070e-14
Identity = 38/90 (42.22%), Postives = 56/90 (62.22%), Query Frame = 0
Query:   53 IFVLVTQREKMGTTLSASKEVTIAGAESFSVQTLVGIRDIPELELCARAIISKISEDGCPKPLLISLALRDHSMRTIRAVIEKVTELRVW 142
            I V+ +Q   MGT L A KE  ++   ++SV  ++G RD P L  C R +I  IS    PKPL++SL L+DHS+ T++A++  V E R+W
Sbjct:   20 IKVMASQIGSMGTILHARKEEGMSIDPTYSVSVILGKRDEPMLMACGRQLIQHISSSRSPKPLVLSLGLKDHSLETLKAIVSTVVENRLW 109          
BLAST of Ggra4600.t1 vs. uniprot
Match: proteasome assembly chaperone 3-like n=1 Tax=Anneissia japonica TaxID=1529436 RepID=UPI001425AB2B (proteasome assembly chaperone 3-like n=1 Tax=Anneissia japonica TaxID=1529436 RepID=UPI001425AB2B)

HSP 1 Score: 73.6 bits (179), Expect = 4.580e-14
Identity = 38/114 (33.33%), Postives = 69/114 (60.53%), Query Frame = 0
Query:   31 KSATVQICDRRTDFLVQPFSDRIFVLVTQREKMGTTLSASKEVTIAGAES--FSVQTLVGIRDIPELELCARAIISKISEDGCPKPLLISLALRDHSMRTIRAVIEKVTELRVW 142
            K   V I +  TD +   F+D++ +++TQ +K+GT +    E  I+G +   F+ + L+G +D P   + AR I  K+ + G  KPLL++LAL+D +   ++A++E +T+ +VW
Sbjct:   15 KKGAVVISNIHTDIVCTSFTDKLMLIITQYQKLGTVMYVFNEAEISGMQQPLFNTKVLIG-KDEPVTHVYARNIALKLHQLGNTKPLLLTLALKDDTPEMLKAILESITQCKVW 127          
BLAST of Ggra4600.t1 vs. uniprot
Match: proteasome assembly chaperone 3-like n=1 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D66249 (proteasome assembly chaperone 3-like n=1 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D66249)

HSP 1 Score: 69.7 bits (169), Expect = 1.260e-12
Identity = 42/122 (34.43%), Postives = 68/122 (55.74%), Query Frame = 0
Query:   23 SGHNAHFIKSATVQICDRRTDFLVQPFSDRIFVLVTQREKMGTTLSASKEVTIAGA--ESFSVQTLVGIRDIPELELCARAIISKISEDGCPKPLLISLALRDHSMRTIRAVIEKVTELRVW 142
            +G +    K     I    TD +   F DRIFV +TQ EK+GT +    + T A    +SF+ + L+G +D P   + A+ + +KI E    KPLL+++AL++HS   ++++ E V + RVW
Sbjct:    2 AGEDLPVSKQGAATIDGIHTDVVCTAFKDRIFVAITQYEKLGTIVHVIPDSTPADTRQQSFTTKVLLG-KDEPITHVMAKNLATKICEGPDSKPLLLAIALKEHSPSVLKSLQELVVQFRVW 122          
BLAST of Ggra4600.t1 vs. uniprot
Match: proteasome assembly chaperone 3-like n=1 Tax=Asterias rubens TaxID=7604 RepID=UPI001454EA86 (proteasome assembly chaperone 3-like n=1 Tax=Asterias rubens TaxID=7604 RepID=UPI001454EA86)

HSP 1 Score: 68.2 bits (165), Expect = 4.990e-12
Identity = 40/103 (38.83%), Postives = 63/103 (61.17%), Query Frame = 0
Query:   42 TDFLVQPFSDRIFVLVTQREKMGTTLSASKEVTIAGAE--SFSVQTLVGIRDIPELELCARAIISKISEDGCPKPLLISLALRDHSMRTIRAVIEKVTELRVW 142
            TD +   FSDRIFV++TQ EKMGT +  + + T A     +F+ + L+G  D P   + A+ I SKI      KP+L+S+AL++HS   ++++ + V + RVW
Sbjct:   21 TDVVCSAFSDRIFVMITQYEKMGTLVHITPDTTPADTRQGNFTTRVLLG-NDEPVTHVFAKNIASKICLAPDSKPILLSIALKEHSPALLKSLQDLVMQYRVW 122          
The following BLAST results are available for this feature:
BLAST of Ggra4600.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IM542.230e-7683.80Proteasome assembly chaperone 3 n=1 Tax=Gracilario... [more]
R7QMC19.940e-5057.04Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S2B7E12.690e-1842.50Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A6T5UGU55.240e-1840.20Hypothetical protein n=1 Tax=Polyblepharides amyli... [more]
A9NRF55.240e-1841.07Uncharacterized protein n=1 Tax=Picea sitchensis T... [more]
A0A2P6U5865.320e-1633.33Proteasome assembly chaperone 3 n=1 Tax=Chlorella ... [more]
A0A835MIV92.070e-1442.22Uncharacterized protein n=1 Tax=Coptis chinensis T... [more]
proteasome assembly chaperone 3-like n=1 Tax=Anneissia japonica TaxID=1529436 RepID=UPI001425AB2B4.580e-1433.33proteasome assembly chaperone 3-like n=1 Tax=Annei... [more]
proteasome assembly chaperone 3-like n=1 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D662491.260e-1234.43proteasome assembly chaperone 3-like n=1 Tax=Patir... [more]
proteasome assembly chaperone 3-like n=1 Tax=Asterias rubens TaxID=7604 RepID=UPI001454EA864.990e-1238.83proteasome assembly chaperone 3-like n=1 Tax=Aster... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.230.90coord: 26..142
e-value: 3.7E-29
score: 103.2
IPR018788Proteasome assembly chaperone 3PFAMPF10178PAC3coord: 55..138
e-value: 5.7E-21
score: 74.5
IPR018788Proteasome assembly chaperone 3PANTHERPTHR31051PROTEASOME ASSEMBLY CHAPERONE 3coord: 30..142

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000941_piloncontigtig00000941_pilon:81452..81947 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra4600.t1Ggra4600.t1Gracilaria gracilis GNS1m malemRNAtig00000941_pilon 81452..81947 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra4600.t1 ID=Ggra4600.t1|Name=Ggra4600.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=143bp
MVGTIVPSARQNAIPVTAPSDDSGHNAHFIKSATVQICDRRTDFLVQPFS
DRIFVLVTQREKMGTTLSASKEVTIAGAESFSVQTLVGIRDIPELELCAR
AIISKISEDGCPKPLLISLALRDHSMRTIRAVIEKVTELRVW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018788Proteasome_assmbl_chp_3