Ggra4515.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra4515.t1
Unique NameGgra4515.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length295
Homology
BLAST of Ggra4515.t1 vs. uniprot
Match: A0A2V3IPB0 (Pre-B-cell leukemia transcription factor 3 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IPB0_9FLOR)

HSP 1 Score: 219 bits (557), Expect = 7.240e-61
Identity = 149/329 (45.29%), Postives = 175/329 (53.19%), Query Frame = 0
Query:   13 YARERALPDFPP---------PHAL----QPYQPPPHMRVHL----IHGLPHSLPPAEHEPPLSHAMAQLFAVGDGTPHHVG-----GLKSHHALPSSGDLSAHGVGAPTAPSL------FQPTVESALGAEYNSFALLATSIARHPSLVVVLKRVFAASGMYQFDADMQLAETLLSAERKCGSVGHCAE--------------------------GVRGGLGLMGSSALRQALDTVCNRQRMGVCGGAVGGGVGGHHNVWRDERHIQKGVGSERTPLSEKAKAALERWLHENLENPYPTIEQKLELARECSMSLNSVNNWFGNKRMKM 287
            Y R+R L   PP         PHAL    QP Q   H  V      +H LP SLP +EH PP+SH              H        L  HHALP   +        P  PSL        P +ESA  AE++++  L  SIARHP  V++ KRVFAA+G + FDAD  L++ L ++ERK  +V H AE                           VR G   + +  LR AL TV N QR+G       G   G  +VW+DERHI KGV S RTPLSEKAKAALERW HENLENPYPTIEQKLELAR CSMSLNSVNNWFGNKRM++
Sbjct: 1918 YPRDRPLDFPPPSDHVEQPPAPHALPPDPQPLQAAAHHAVXXXHQHVHPLPPSLPVSEHAPPMSHGXXXXXXXXXXXXXHPSLHGDPTLAPHHALPVPAE-------PPPPPSLAMQTHTLAPHLESAFAAEHSNYNALVASIARHPFFVLLFKRVFAATGTHPFDADATLSDVLSASERKAMAVRHGAETRGVSGAVSHFSAVDVFLSALLTALSDVRCGFPSVANDTLRHALVTVSNSQRLG-------GSSRGALSVWKDERHIHKGVSSGRTPLSEKAKAALERWFHENLENPYPTIEQKLELARTCSMSLNSVNNWFGNKRMRI 2232          
BLAST of Ggra4515.t1 vs. uniprot
Match: A0A0U9HK51 (Homeobox protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A0U9HK51_KLENI)

HSP 1 Score: 67.4 bits (163), Expect = 8.410e-9
Identity = 26/58 (44.83%), Postives = 39/58 (67.24%), Query Frame = 0
Query:  230 GSERTPLSEKAKAALERWLHENLENPYPTIEQKLELARECSMSLNSVNNWFGNKRMKM 287
            G +   L+    A L  W H++ +NPYPT E+K ELA +C++ +  +NNWFGNKRM++
Sbjct: 1219 GGDGRALAPGVLAVLNAWFHDHFKNPYPTDEEKAELAAQCNLQVKQINNWFGNKRMRL 1276          
BLAST of Ggra4515.t1 vs. uniprot
Match: L8H4T2 (Homeobox domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H4T2_ACACA)

HSP 1 Score: 65.9 bits (159), Expect = 1.990e-8
Identity = 34/101 (33.66%), Postives = 54/101 (53.47%), Query Frame = 0
Query:  186 SALRQALDTVCNRQRMGVCGGAVGGGVGGHHNVWRDERHIQKGVGSERTPLSEKAKAALERWLHENLENPYPTIEQKLELARECSMSLNSVNNWFGNKRMK 286
            + L++  D +  + R  VC   V             ++H  + V  +R  L++KA   L  W   +L +PYP+ E+K+ LA  C ++LN VNNWFGNKR++
Sbjct:  379 AVLQERFDYLRTQLRQSVCNAIV-----------LLQKHYNQ-VKKKRRSLNKKATEVLNTWFFNHLNDPYPSDEEKMMLASHCGLTLNQVNNWFGNKRIR 467          
BLAST of Ggra4515.t1 vs. uniprot
Match: A8XC37 (Protein CBR-CEH-60 n=4 Tax=Caenorhabditis TaxID=6237 RepID=A8XC37_CAEBR)

HSP 1 Score: 65.5 bits (158), Expect = 2.070e-8
Identity = 24/57 (42.11%), Postives = 40/57 (70.18%), Query Frame = 0
Query:  230 GSERTPLSEKAKAALERWLHENLENPYPTIEQKLELARECSMSLNSVNNWFGNKRMK 286
            G +R    +     L+ W HE+ +NPYPT ++K ELA++C++ ++ VNNWFGN+R++
Sbjct:  183 GRKRRNFDKNTTDTLQNWFHEHRQNPYPTDQEKAELAKQCNIKISQVNNWFGNQRIR 239          
BLAST of Ggra4515.t1 vs. uniprot
Match: A0A158QI56 (Uncharacterized protein n=1 Tax=Rodentolepis nana TaxID=102285 RepID=A0A158QI56_RODNA)

HSP 1 Score: 64.7 bits (156), Expect = 5.910e-8
Identity = 30/63 (47.62%), Postives = 43/63 (68.25%), Query Frame = 0
Query:  224 HIQKGVGSERTPLSEKAKAALERWLHENLENPYPTIEQKLELARECSMSLNSVNNWFGNKRMK 286
            +I++ VG  RT L   A+  L +WL+E+L  PYP+ E+KLELAR+  +S  +VNNWF N R +
Sbjct:  711 NIRRAVGLSRTNLPFPARKTLFKWLNEHLREPYPSEEEKLELARQTGLSRTTVNNWFINARRR 773          
BLAST of Ggra4515.t1 vs. uniprot
Match: A0A3P7BPE7 (Homeobox domain-containing protein n=3 Tax=Hymenolepis diminuta TaxID=6216 RepID=A0A3P7BPE7_HYMDI)

HSP 1 Score: 64.3 bits (155), Expect = 7.400e-8
Identity = 30/63 (47.62%), Postives = 43/63 (68.25%), Query Frame = 0
Query:  224 HIQKGVGSERTPLSEKAKAALERWLHENLENPYPTIEQKLELARECSMSLNSVNNWFGNKRMK 286
            +I++ VG  RT L   A+  L +WL+E+L  PYP+ E+KLELAR+  +S  +VNNWF N R +
Sbjct:  508 NIRRAVGLSRTNLPFPARKILFKWLNEHLREPYPSEEEKLELARQTGLSRTTVNNWFINARRR 570          
BLAST of Ggra4515.t1 vs. uniprot
Match: A0A2P4WM69 (Homeobox domain-containing protein (Fragment) n=5 Tax=Caenorhabditis TaxID=6237 RepID=A0A2P4WM69_CAERE)

HSP 1 Score: 62.8 bits (151), Expect = 1.370e-7
Identity = 22/57 (38.60%), Postives = 40/57 (70.18%), Query Frame = 0
Query:  230 GSERTPLSEKAKAALERWLHENLENPYPTIEQKLELARECSMSLNSVNNWFGNKRMK 286
            G +R    +     L+ W H++ +NPYP+ ++K ELA++C++ ++ VNNWFGN+R++
Sbjct:  181 GRKRRNFDKNTTDTLQNWFHDHRQNPYPSDQEKAELAKQCNIKISQVNNWFGNQRIR 237          
BLAST of Ggra4515.t1 vs. uniprot
Match: A0A6A0GXH8 (Homeobox protein extradenticle n=4 Tax=Eumalacostraca TaxID=72041 RepID=A0A6A0GXH8_HYAAZ)

HSP 1 Score: 62.0 bits (149), Expect = 1.500e-7
Identity = 26/54 (48.15%), Postives = 38/54 (70.37%), Query Frame = 0
Query:  233 RTPLSEKAKAALERWLHENLENPYPTIEQKLELARECSMSLNSVNNWFGNKRMK 286
            R   S++A   L  + + NL NPYP+ E+K  LAR CS+++N V+NWFGNKR++
Sbjct:  130 RRNFSKQASEILNEYFYSNLSNPYPSEEEKEALARRCSITVNQVSNWFGNKRIR 183          
BLAST of Ggra4515.t1 vs. uniprot
Match: CEH60 (Homeobox protein ceh-60 n=1 Tax=Caenorhabditis elegans TaxID=6239 RepID=CEH60_CAEEL)

HSP 1 Score: 62.4 bits (150), Expect = 2.040e-7
Identity = 22/57 (38.60%), Postives = 40/57 (70.18%), Query Frame = 0
Query:  230 GSERTPLSEKAKAALERWLHENLENPYPTIEQKLELARECSMSLNSVNNWFGNKRMK 286
            G +R    +     L+ W H++ +NPYP+ ++K ELA++C++ ++ VNNWFGN+R++
Sbjct:  181 GRKRRNFDKNTTDILQNWFHDHRQNPYPSDQEKAELAKQCNIKISQVNNWFGNQRIR 237          
BLAST of Ggra4515.t1 vs. uniprot
Match: A0A2H2HV70 (Homeobox domain-containing protein n=1 Tax=Caenorhabditis japonica TaxID=281687 RepID=A0A2H2HV70_CAEJA)

HSP 1 Score: 62.4 bits (150), Expect = 2.060e-7
Identity = 22/57 (38.60%), Postives = 40/57 (70.18%), Query Frame = 0
Query:  230 GSERTPLSEKAKAALERWLHENLENPYPTIEQKLELARECSMSLNSVNNWFGNKRMK 286
            G +R    +     L+ W HE+ +NPYP+ ++K +LA++C++ ++ VNNWFGN+R++
Sbjct:  196 GRKRRNFDKNTTDILQNWFHEHRQNPYPSDQEKADLAKQCNIKISQVNNWFGNQRIR 252          
The following BLAST results are available for this feature:
BLAST of Ggra4515.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IPB07.240e-6145.29Pre-B-cell leukemia transcription factor 3 n=1 Tax... [more]
A0A0U9HK518.410e-944.83Homeobox protein n=1 Tax=Klebsormidium nitens TaxI... [more]
L8H4T21.990e-833.66Homeobox domain containing protein n=1 Tax=Acantha... [more]
A8XC372.070e-842.11Protein CBR-CEH-60 n=4 Tax=Caenorhabditis TaxID=62... [more]
A0A158QI565.910e-847.62Uncharacterized protein n=1 Tax=Rodentolepis nana ... [more]
A0A3P7BPE77.400e-847.62Homeobox domain-containing protein n=3 Tax=Hymenol... [more]
A0A2P4WM691.370e-738.60Homeobox domain-containing protein (Fragment) n=5 ... [more]
A0A6A0GXH81.500e-748.15Homeobox protein extradenticle n=4 Tax=Eumalacostr... [more]
CEH602.040e-738.60Homeobox protein ceh-60 n=1 Tax=Caenorhabditis ele... [more]
A0A2H2HV702.060e-738.60Homeobox domain-containing protein n=1 Tax=Caenorh... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001356Homeobox domainSMARTSM00389HOX_1coord: 229..294
e-value: 1.2E-8
score: 44.7
IPR001356Homeobox domainPROSITEPS50071HOMEOBOX_2coord: 227..290
score: 13.07003
IPR001356Homeobox domainCDDcd00086homeodomaincoord: 233..287
e-value: 1.17932E-14
score: 65.3424
NoneNo IPR availableGENE3D1.10.10.60coord: 231..291
e-value: 2.4E-18
score: 67.4
NoneNo IPR availablePANTHERPTHR11850HOMEOBOX PROTEIN TRANSCRIPTION FACTORScoord: 164..286
IPR008422Homeobox KN domainPFAMPF05920Homeobox_KNcoord: 247..285
e-value: 1.2E-12
score: 47.5
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 233..287

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000898_piloncontigtig00000898_pilon:795148..796382 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra4515.t1Ggra4515.t1Gracilaria gracilis GNS1m malemRNAtig00000898_pilon 795148..796382 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra4515.t1 ID=Ggra4515.t1|Name=Ggra4515.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=295bp
LSCHLPPPAAVHYARERALPDFPPPHALQPYQPPPHMRVHLIHGLPHSLP
PAEHEPPLSHAMAQLFAVGDGTPHHVGGLKSHHALPSSGDLSAHGVGAPT
APSLFQPTVESALGAEYNSFALLATSIARHPSLVVVLKRVFAASGMYQFD
ADMQLAETLLSAERKCGSVGHCAEGVRGGLGLMGSSALRQALDTVCNRQR
MGVCGGAVGGGVGGHHNVWRDERHIQKGVGSERTPLSEKAKAALERWLHE
NLENPYPTIEQKLELARECSMSLNSVNNWFGNKRMKMFDSYCFV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001356Homeobox_dom
IPR008422Homeobox_KN_domain
IPR009057Homeobox-like_sf