Ggra4460.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra4460.t1
Unique NameGgra4460.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length85
Homology
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BLAST of Ggra4460.t1 vs. uniprot
Match: A0A2V3IUM5 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUM5_9FLOR)

HSP 1 Score: 86.3 bits (212), Expect = 5.660e-20
Identity = 43/74 (58.11%), Postives = 55/74 (74.32%), Query Frame = 0 
Query:    3 PVAVVQHFAPETLLLTQNITLRIFLGGMGIVASGVIGVVFVGYFVSRNFDEVEREFQNRDRAVERLKALEELRE 76
            PVAV   F P TLL+ ++IT RIF+GG+GIV SG++GV    Y VS+NFD  E EFQNRD A++R + L+ELRE
Sbjct:   42 PVAVADPFTPGTLLIAKDITFRIFMGGLGIVFSGIVGVAVTAYLVSKNFDTFEEEFQNRDGAIDRRRRLDELRE 115
The following BLAST results are available for this feature:
BLAST of Ggra4460.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IUM55.660e-2058.11Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 54..84
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..24
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 25..47
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 48..84
NoneNo IPR availableTMHMMTMhelixcoord: 25..47

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000898_piloncontigtig00000898_pilon:560804..561160 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra4460.t1Ggra4460.t1Gracilaria gracilis GNS1m malemRNAtig00000898_pilon 560804..561160 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra4460.t1 ID=Ggra4460.t1|Name=Ggra4460.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=85bp
MSPVAVVQHFAPETLLLTQNITLRIFLGGMGIVASGVIGVVFVGYFVSRN
FDEVEREFQNRDRAVERLKALEELRERKERERQS*
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