Ggra4411.t1 (polypeptide) Gracilaria gracilis GNS1m male
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Overview
Homology
BLAST of Ggra4411.t1 vs. uniprot
Match: A0A2V3IGJ8 (Mitochondrial import inner membrane translocase subunit TIM50 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGJ8_9FLOR) HSP 1 Score: 354 bits (908), Expect = 1.630e-117 Identity = 204/381 (53.54%), Postives = 244/381 (64.04%), Query Frame = 0
Query: 1 MQRASS-RSLRSTPLVLTRVSHSLLKRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHSSRWTLRNVVLASGIAAMVGVSAAPQTRSDVADALQRTKHDVEQRINFFTKPSRDKLLPDLPKHAAHVRTLVIDLEHTLVHCSYSRARGWRIAKRPGAEAFLAYMASFYEVVVFTSNLHSFADPILDKLDPNGYINHRLYRHETHYQHGVHIKDVSALNRDLSRVIVIDHDEKHTSLQPDNAIIIPKWTGDTSDTTLLDLIPMLESLVRSDVADVREHIAILKGKPVAEGVAEYRAMENVNVNTPRSTAGSLFGRSC-GADAPLXXXXXXXXXXXXXXELAHDGAKRPSGTVWGSLSGSGMFSRSSHSAGDDKR 379
M RA + RSLR PLV+TR+SHSL + S W+ R V++A+G A+ +A P R LQ +H + RIN F +PSR+KLLPD+PK VRTLVIDLE TLV SY+RA GWRIAKRPGAEAFLAYMASFYE+VVFTS+L+ +ADPILDKLDPN YI+HRLYR ETHY++GVH+KD+S LNRDLSRVIVIDHDEKH S+QP+N I+IPKW GD SDT+LLDLIP+LE +VR DV DVR HI +L+GKP+AEGVAEYRA+ + + A SLFGR+ GAD DGA G VWG LSGSG FSR + +A DKR
Sbjct: 1 MHRAPTPRSLRCAPLVITRISHSLRHHQPNPSSRAASTKSTPTRTPPAQQAPP---------------SAWSARKVLVATGALAVAAGAAYPPIREQAQATLQDAQHAIRARINMFAQPSREKLLPDVPKGMHSVRTLVIDLEKTLVSSSYTRASGWRIAKRPGAEAFLAYMASFYEIVVFTSSLNMYADPILDKLDPNMYISHRLYRAETHYRNGVHVKDLSRLNRDLSRVIVIDHDEKHVSMQPENCILIPKWDGDASDTSLLDLIPVLEGVVRRDVKDVRNHIGVLRGKPLAEGVAEYRALADAQMQAEGGRAISLFGRAVDGADDTRAVGRPGANGEDD------DGAA--PGAVWGRLSGSGFFSRPAPAA--DKR 356
BLAST of Ggra4411.t1 vs. uniprot
Match: R7Q6D7 (Mitochondrial import inner membrane translocase subunit TIM50 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q6D7_CHOCR) HSP 1 Score: 261 bits (668), Expect = 3.930e-81 Identity = 139/261 (53.26%), Postives = 178/261 (68.20%), Query Frame = 0
Query: 67 SSRWTLRNVVLASGIAAMVGVSAAPQTRSDVADALQRTKHDVEQRINFFTKPSRDKLLPDLPKH---AAHVRTLVIDLEHTLVHCSYSRARGWRIAKRPGAEAFLAYMASFYEVVVFTSNLHSFADPILDKLDPNGYINHRLYRHETHYQHGVHIKDVSALNRDLSRVIVIDHDEKHTSLQPDNAIIIPKWTGDTSDTTLLDLIPMLESLVRSDVADVREHIAILKGKPVAEGVAEYRAMENVNV-NTPRSTAGS-LFGRS 322
++ W+ R LA+ A + G + ++ V+ +I +F +PSR KLLPDL RTLVIDLE TL++ +YSRA GWR+AKRPGAEAFLAY+ASFYE++VFTS L S+A+PIL+KLDPNGYI +LYR ET Y+ GVHIK++ LNRDLSRV+VIDHD K L P NAII+P+WTGD+SDT LLDLIP LE++V DVADVRE + +L +A VAEYRA+ N + AG+ LFG +
Sbjct: 58 ATSWSRRLTQLAAASAVIGGAATYISDPDGTTATVRGAVEAVDAQIKYFAEPSRKKLLPDLEPAFPGGPIPRTLVIDLERTLIYSTYSRASGWRVAKRPGAEAFLAYLASFYEIIVFTSALDSYAEPILNKLDPNGYITDKLYRAETDYKRGVHIKNLDVLNRDLSRVVVIDHDAKQVGLHPQNAIIVPEWTGDSSDTALLDLIPFLEAMVNDDVADVREELKLLSDGDIAAAVAEYRAVAAARADNAAGAGAGTGLFGHA 318
BLAST of Ggra4411.t1 vs. uniprot
Match: A0A7S3A5U8 (Mitochondrial import inner membrane translocase subunit TIM50 n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A5U8_9RHOD) HSP 1 Score: 228 bits (581), Expect = 6.170e-68 Identity = 116/203 (57.14%), Postives = 148/203 (72.91%), Query Frame = 0
Query: 105 KHDVEQRINFFTKPSRDKLLPDLPKHAAH---VRTLVIDLEHTLVHCSYSRARGWRIAKRPGAEAFLAYMASFYEVVVFTSNLHSFADPILDKLDPNGYINHRLYRHETHYQHGVHIKDVSALNRDLSRVIVIDHDEKHTSLQPDNAIIIPKWTGDTSDTTLLDLIPMLESLVRSDVADVREHIAILKGKPVAEGVAEYRAME 304
+ +V ++I FFT+PS DKLLPD K+ RTLVI+L+ TLVH +SRA GWR KRPG EAFLAY++SFYE+V+FTS ++ADPILDKLDP+GYI HRLYR T ++ GV++KD+S LNRDL+R IVID D LQP NA+++PKW D D TLLDLIPMLE++VR D+ DVR +A G VA+ A R++E
Sbjct: 128 QEEVMEKIRFFTEPSSDKLLPDPVKYPGGGLPPRTLVIELDDTLVHSMWSRATGWRHTKRPGVEAFLAYLSSFYEIVLFTSQPTTYADPILDKLDPSGYIMHRLYRDATRFKGGVYVKDLSKLNRDLARTIVIDTDSHALELQPSNALLVPKWDRDPMDRTLLDLIPMLENIVRDDIQDVRPMLASYYGTDVAKEYARRRSVE 330
BLAST of Ggra4411.t1 vs. uniprot
Match: M2W7T1 (Mitochondrial import inner membrane translocase subunit TIM50 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2W7T1_GALSU) HSP 1 Score: 225 bits (574), Expect = 4.010e-67 Identity = 120/260 (46.15%), Postives = 164/260 (63.08%), Query Frame = 0
Query: 105 KHDVEQRINFFTKPSRDKLLPD-LPKHAAHV--RTLVIDLEHTLVHCSYSRARGWRIAKRPGAEAFLAYMASFYEVVVFTSNLHSFADPILDKLDPNGYINHRLYRHETHYQHGVHIKDVSALNRDLSRVIVIDHDEKHTSLQPDNAIIIPKWTGDTSDTTLLDLIPMLESLVRSDVADVREHIAILKGKPVAEGVAEYRAMENVNVNTPRSTAGSLFGRSCGADAPLXXXXXXXXXXXXXXELAHDGAKRPSGTVWGSL 361
K VE ++ +FT+PSR+KLLPD +P++A + RTLV+DL+ TLVH ++SRA GW+ AKRPG +AFLAYM+SFYE+VV+TS + + +PIL+KLDPNGYI+HRLYR T Y+ GVH+KD+S LNRDL+R I+ID D LQPDN I I +TGD +D LLDLIP LE +VR D+ DVR I +G + A+ + + + T+ S G + + GA+ P G++W L
Sbjct: 106 KDAVESKVRYFTEPSRNKLLPDPMPQYAGGLPPRTLVLDLDETLVHSTWSRATGWKTAKRPGVDAFLAYMSSFYEIVVYTSAMPGYGEPILEKLDPNGYISHRLYRDATKYEKGVHLKDLSKLNRDLARTIIIDDDANCFRLQPDNGIRIAPFTGDVNDRYLLDLIPFLEYIVREDIPDVRPVIGSYRGLDIPLEFAKRQQLRSQEKGRDSKTSASALRAVTGGGGGMASSEHA---------IQEKGAEPPPGSIWNRL 356
BLAST of Ggra4411.t1 vs. uniprot
Match: A0A7J7IJ07 (Mitochondrial import inner membrane translocase subunit TIM50 n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IJ07_9RHOD) HSP 1 Score: 220 bits (560), Expect = 5.030e-64 Identity = 116/218 (53.21%), Postives = 154/218 (70.64%), Query Frame = 0
Query: 76 VLASGIAAMVGVSAAPQTRSDVADALQRTKHDVEQRINFFTKPSRDKLLPD-LPKHAAHV--RTLVIDLEHTLVHCSYSRARGWRIAKRPGAEAFLAYMASFYEVVVFTSNLHSFADPILDKLDPNGYINHRLYRHETHYQHGVHIKDVSALNRDLSRVIVIDHDEKHTSLQPDNAIIIPKWTG-DTSDTTLLDLIPMLESLVRSDVADVREHIAILK 289
VL S +A + +A PQ + + L+R + DVE RI ++ +PSRDKLLPD +P + + RTLV+DL+ TL+H +SR+ GWR +KRPG +AFLAYMA FYE+VVFTS L +ADPILD+LDPNGYI HRLYRHET Y+ G+H+KD++ LNRDL R I+ID+D + SLQ +N I + W G + D LL L LE +VR+DV DVR IA ++
Sbjct: 142 VLGSTVAVLAAWAADPQ---GIWERLERLRRDVESRIRYYVEPSRDKLLPDPIPAYPGGLPPRTLVLDLDETLMHSEWSRSTGWRTSKRPGVDAFLAYMAQFYEIVVFTSALPGYADPILDRLDPNGYITHRLYRHETKYRDGLHVKDLAKLNRDLRRTIIIDNDPRVFSLQSENGIEVAPWHGTEPDDKELLRLTAFLEWVVRNDVDDVRTVIASVR 356
BLAST of Ggra4411.t1 vs. uniprot
Match: A0A7S0ZB92 (Mitochondrial import inner membrane translocase subunit TIM50 n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZB92_9RHOD) HSP 1 Score: 215 bits (548), Expect = 7.170e-63 Identity = 115/260 (44.23%), Postives = 165/260 (63.46%), Query Frame = 0
Query: 67 SSRWTLRNVVLASGIAAMVGVSAAPQTRSDVADAL-QRTKHDVEQRINFFTKPSRDKLLPD-LPKHAAH--VRTLVIDLEHTLVHCSYSRARGWRIAKRPGAEAFLAYMASFYEVVVFTSNLHSFADPILDKLDPNGYINHRLYRHETHYQHGVHIKDVSALNRDLSRVIVIDHDEKHTSLQPDNAIIIPKWTGDTSDTTLLDLIPMLESLVRSDVADVREHIAILKGKPVAEGVAEYRAMENVNVNTPRSTAGSLFGRS 322
S +++ + AS + +G+ A + + L + I +FT+PS+DK LPD +P + +RTLV+DL+ TLVH +++R GW+I+KRPG EAFLAYM+SFYE+VVFTS L+S+ADPILD+LDP+GYI RLYR T +++G H+ D+S LNRDL VI++D +H LQPDN ++IP W D D TL++LIP LESLVR DV DVR ++ G + E++ + ++ S +G G S
Sbjct: 115 SGSFSIGRFLAASTLVGGIGLGIAYFVKPEETKKLVTESSETANAYIKYFTEPSKDKFLPDPMPMYPGGPPMRTLVLDLDETLVHSTWTRQSGWKISKRPGVEAFLAYMSSFYEIVVFTSGLNSYADPILDRLDPSGYIMQRLYRDATKFENGTHVFDLSKLNRDLENVILLDSHVEHAKLQPDNLLLIPSWKSDPRDRTLIELIPFLESLVRDDVRDVRPVLSSYVGLDIP---TEFQRRQREKEDSAVSWSGGFSGPS 371
BLAST of Ggra4411.t1 vs. uniprot
Match: M1V986 (Mitochondrial import inner membrane translocase subunit TIM50 n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1V986_CYAM1) HSP 1 Score: 213 bits (541), Expect = 9.670e-62 Identity = 109/198 (55.05%), Postives = 142/198 (71.72%), Query Frame = 0
Query: 101 LQRTKHDVEQRINFFTKPSRDKLLPD--------LPKHAAHVRTLVIDLEHTLVHCSYSRARGWRIAKRPGAEAFLAYMASFYEVVVFTSNLHSFADPILDKLDPNGYINHRLYRHETHYQHGVHIKDVSALNRDLSRVIVIDHDEKHTSLQPDNAIIIPKWTG-DTSDTTLLDLIPMLESLVRSDVADVREHIAILK 289
L+R +H++E RI ++ +PSR+KLLPD LP RTLV+DL+ TLVH ++R+ GWR +KRPG +AFLAYMA FYE+VVFTS L +ADPILD++DPNGYI HRLYRHET Y+ G+H+KD++ LNRDL R I+ID+D + +LQ +N I I W G D D LL L LE +VR+DVADVR IA ++
Sbjct: 110 LERLRHELESRIRYYVEPSREKLLPDPVAPFPGSLPP-----RTLVLDLDETLVHSDWTRSTGWRTSKRPGVDAFLAYMAQFYEIVVFTSALPGYADPILDRMDPNGYITHRLYRHETKYRDGLHMKDLAKLNRDLRRTIIIDNDPRVFALQSENGIEIAPWNGTDPDDKELLRLTAFLEWVVRNDVADVRPIIATVR 302
BLAST of Ggra4411.t1 vs. uniprot
Match: A0A5J4YU03 (Mitochondrial import inner membrane translocase subunit TIM50 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YU03_PORPP) HSP 1 Score: 202 bits (513), Expect = 1.570e-57 Identity = 97/182 (53.30%), Postives = 132/182 (72.53%), Query Frame = 0
Query: 104 TKHDVEQRINFFTKPSRDKLLPD-LPKHAAHV--RTLVIDLEHTLVHCSYSRARGWRIAKRPGAEAFLAYMASFYEVVVFTSNLHSFADPILDKLDPNGYINHRLYRHETHYQHGVHIKDVSALNRDLSRVIVIDHDEKHTSLQPDNAIIIPKWTGDTSDTTLLDLIPMLESLVRSDVADVR 282
T+ + + +FT+PS+DK LPD LP TLV+DL+ TL+H ++SR GWRIAKRPG EAFLAYM+SFYE+VVF++ L+++ADPILD+LDPNGYI+HRLYR T Y+ G H+ D+S LNRD SR++++D H QP N +++ +W D D TLL+LIP LES+ + +V DVR
Sbjct: 165 TQKMISDFVEYFTEPSKDKFLPDPLPMFPGGPPPMTLVLDLDETLIHSNWSRQSGWRIAKRPGLEAFLAYMSSFYEIVVFSTGLNTYADPILDRLDPNGYISHRLYRDATKYESGEHVFDLSKLNRDESRIVLVDSHAIHAKHQPGNLLLVSQWKNDPKDRTLLELIPFLESMAQENVRDVR 346
BLAST of Ggra4411.t1 vs. uniprot
Match: I0YZL4 (Mitochondrial import inner membrane translocase subunit TIM50 n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YZL4_COCSC) HSP 1 Score: 196 bits (497), Expect = 1.980e-57 Identity = 92/195 (47.18%), Postives = 135/195 (69.23%), Query Frame = 0
Query: 105 KHDVEQRINFFTKPSRDKLLPDLPKHAAHVRTLVIDLEHTLVHCSYSRARGWRIAKRPGAEAFLAYMASFYEVVVFTSNLHSFADPILDKLDPNGYINHRLYRHETHYQHGVHIKDVSALNRDLSRVIVIDHDEKHTSLQPDNAIIIPKWTGDTSDTTLLDLIPMLESLVRSDVADVREHIAILKGKPVAEGVAE 299
+ +E+++ ++ P + LLPDLP HA HVRTLV+DL+ TL+H ++R RGWR KRPGAE FL MA +YE+VV+T L ++ADPILD+LDP +I +RLYR T Y +G H+++++ LNRDL +V++I +E SLQ DNAI + W ++ DT LLDL+P+LE + R++V DVR + +G+ + E
Sbjct: 8 RRSLEEQVKKYSDPPSEHLLPDLPAHARHVRTLVLDLDDTLIHSDWTRGRGWRTFKRPGAEDFLRQMAQYYELVVYTDQLPTYADPILDRLDPQRFIQYRLYRDSTQYINGKHVRNLNYLNRDLDKVLLITANEDAYSLQADNAIKLKPWKLESEDTALLDLLPLLEQVFRTNVPDVRAVVRSFEGEDIPSAFRE 202
BLAST of Ggra4411.t1 vs. uniprot
Match: A0A7J3D5D1 (FCP1 homology domain-containing protein n=1 Tax=Nitrososphaeria archaeon TaxID=2268198 RepID=A0A7J3D5D1_9ARCH) HSP 1 Score: 197 bits (500), Expect = 3.980e-57 Identity = 99/216 (45.83%), Postives = 141/216 (65.28%), Query Frame = 0
Query: 108 VEQRINFFTKPSRDKLLPDLPKHAAHVRTLVIDLEHTLVHCSYSRARGWRIAKRPGAEAFLAYMASFYEVVVFTSNLHSFADPILDKLDPNGYINHRLYRHETHYQHGVHIKDVSALNRDLSRVIVIDHDEKHTSLQPDNAIIIPKWTGDTSD-TTLLDLIPMLESLVRSDVADVREHIAILKGKPVAEGVAEYRA-MENVNVNTPRSTAGSLFGR 321
+E + + P D+LLPDLP HA H++TLV+DL+ L+H ++RARGWR KRPG E FL MA +YE+VV+TS L ++ADPILD+LDP + +RLYR T Y +G H++D+S LNRDL +V++I +LQP+NAI + KWT + SD TTL+DL+P LE++VR+ V DVR+ + G+ + E A ++ + S G GR
Sbjct: 66 IESEMKKYADPPSDRLLPDLPPHARHIKTLVLDLDDVLIHSDWTRARGWRTFKRPGVEDFLKDMAQYYELVVYTSQLPTYADPILDRLDPQRLLQYRLYRDSTRYVNGKHVRDLSMLNRDLKQVLLITASPDAYALQPENAIKLDKWTTEKSDDTTLIDLLPFLEAIVRTSVTDVRDVVRSYDGQYIPTAFRERMAKVQEAKLRRQSSGKGFFSGR 281 The following BLAST results are available for this feature:
BLAST of Ggra4411.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Ggra4411.t1 ID=Ggra4411.t1|Name=Ggra4411.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=380bpback to top |