Ggra4394.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra4394.t1
Unique NameGgra4394.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length141
Homology
BLAST of Ggra4394.t1 vs. uniprot
Match: A0A2V3J8B9 (Telomere-associated protein 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J8B9_9FLOR)

HSP 1 Score: 89.0 bits (219), Expect = 4.970e-18
Identity = 46/82 (56.10%), Postives = 58/82 (70.73%), Query Frame = 0
Query:   10 KATRKKGRRESYTRFSASEEAHLLEGVRKYGAGKWKKILTCYEFHRKRTAVDLKDKYRNIMRAQEREKRQRLERVGVGKGSS 91
            +A++  GRR+SYTRF+A EEA LL+GVR +G G WKKIL  Y FH KRTAVDLKDKYRN+ RA       +L R+  G  ++
Sbjct:  276 RASKTSGRRDSYTRFTAEEEAMLLDGVRVFGVGNWKKILNSYRFHWKRTAVDLKDKYRNMTRA-------KLRRINAGNSAA 350          
BLAST of Ggra4394.t1 vs. uniprot
Match: M2VTP0 (DNA-binding protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2VTP0_GALSU)

HSP 1 Score: 67.8 bits (164), Expect = 7.280e-11
Identity = 35/69 (50.72%), Postives = 46/69 (66.67%), Query Frame = 0
Query:    2 KITGRTVAKATRKKGRRESYTRFSASEEAHLLEGVRKYGAGKWKKILTCYEFHRKRTAVDLKDKYRNIM 70
            K   R++ K+ RKK    SY RF+  EE +L  G+ ++G G+WK IL  Y FH KRT VDLKDKYRN++
Sbjct:  181 KKRSRSIIKSKRKK----SYIRFTPEEEMNLRIGISQFGVGRWKNILYSYPFHPKRTCVDLKDKYRNML 245          
BLAST of Ggra4394.t1 vs. uniprot
Match: L1JWB7 (Uncharacterized protein n=2 Tax=Guillardia theta TaxID=55529 RepID=L1JWB7_GUITC)

HSP 1 Score: 58.9 bits (141), Expect = 2.020e-7
Identity = 26/55 (47.27%), Postives = 39/55 (70.91%), Query Frame = 0
Query:   19 ESYTRFSASEEAHLLEGVRKYGAGKWKKILTCYEFHRKRTAVDLKDKYRNIMRAQ 73
            + Y R++A EE  L +G+ +YG  KW  IL+ ++FH  R+AVDLKDK+RN+ + Q
Sbjct:  562 KGYIRWTAEEEETLRKGIERYGPSKWTMILSNFDFHPSRSAVDLKDKWRNLQKKQ 616          
BLAST of Ggra4394.t1 vs. uniprot
Match: L8GYK3 (Myblike DNA-binding domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GYK3_ACACA)

HSP 1 Score: 57.8 bits (138), Expect = 5.290e-7
Identity = 34/62 (54.84%), Postives = 43/62 (69.35%), Query Frame = 0
Query:   16 GRRESYTRFSASEEAHLL-EGVRKYGAGKWKKILTCYEFHRKRTAVDLKDKYRNIMRAQERE 76
            GRR+   RF   +E  LL EGVR +G G W KIL+ YEF   RT+VDLKDKYRN+++ Q +E
Sbjct:  504 GRRKK--RFWTDDEIELLLEGVRTHGLGCWAKILSEYEFAPGRTSVDLKDKYRNLLKLQAKE 563          
BLAST of Ggra4394.t1 vs. uniprot
Match: A0A7S0DGD0 (Hypothetical protein (Fragment) n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DGD0_9EUKA)

HSP 1 Score: 55.1 bits (131), Expect = 6.160e-7
Identity = 35/79 (44.30%), Postives = 48/79 (60.76%), Query Frame = 0
Query:    9 AKATRKKGRRESYTRFSASEEAHLLEGVRKYGAGKWKKILTCYEFH-RKRTAVDLKDKYRNIMRAQEREKRQRLERVGV 86
            A+  R+ G  +S   ++  EE  L++GV++ G G+W  IL  Y    R RT VDLKDK+RNI RA+ R KR +L R  V
Sbjct:   31 ARKRRQGGDAKSVNWWTREEERTLVKGVKELGKGRWSMILHKYRGALRGRTTVDLKDKWRNIERAEARRKRLKLARAAV 109          
BLAST of Ggra4394.t1 vs. uniprot
Match: A0A2R5GZ31 (Telomere repeat-binding protein 2 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GZ31_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 7.050e-7
Identity = 28/50 (56.00%), Postives = 40/50 (80.00%), Query Frame = 0
Query:   24 FSASEEAHLLEGVRKYGAG--KWKKILTCYEFHRKRTAVDLKDKYRNIMR 71
            F+  E A+L+EGV K+ +   KW+KIL+ YEF+ +RT+VDLKDK+RNI+R
Sbjct:    9 FTEQEIANLVEGVEKFKSSRQKWRKILSAYEFNSRRTSVDLKDKWRNIVR 58          
BLAST of Ggra4394.t1 vs. uniprot
Match: E1ZHV5 (Uncharacterized protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZHV5_CHLVA)

HSP 1 Score: 56.2 bits (134), Expect = 1.870e-6
Identity = 27/52 (51.92%), Postives = 36/52 (69.23%), Query Frame = 0
Query:   20 SYTRFSASEEAHLLEGVRKYGAGKWKKILTCYEFHRKRTAVDLKDKYRNIMR 71
            SY  +S +E A L EGVR++G G W+KI+  Y   R RT V LKDKYRN+++
Sbjct:    4 SYNHWSEAEVAALKEGVRRFGVGNWQKIVNDYPVLRHRTGVQLKDKYRNMIK 55          
BLAST of Ggra4394.t1 vs. uniprot
Match: A0A6D2JUL9 (Uncharacterized protein n=5 Tax=Coluteocarpeae TaxID=1394505 RepID=A0A6D2JUL9_9BRAS)

HSP 1 Score: 55.8 bits (133), Expect = 2.360e-6
Identity = 29/57 (50.88%), Postives = 40/57 (70.18%), Query Frame = 0
Query:   17 RRESYTRFSASEEAHLLEGVRKYGAGKWKKILTC-YEFHRKRTAVDLKDKYRNIMRA 72
            RR+ +  ++ SE   L+EGV KYGAGKW +I    +  H  RT+VDLKDK+RN++RA
Sbjct:  477 RRKHHRAWTLSEVTKLVEGVSKYGAGKWSEIKKLSFSSHSYRTSVDLKDKWRNLLRA 533          
BLAST of Ggra4394.t1 vs. uniprot
Match: A0A6U2CJB6 (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U2CJB6_HEMAN)

HSP 1 Score: 53.1 bits (126), Expect = 2.900e-6
Identity = 29/63 (46.03%), Postives = 41/63 (65.08%), Query Frame = 0
Query:   18 RESYTRFSASEEAHLLEGVRKYGAGKWKKILTCYEFHRKRTAVDLKDKYRNIMRAQEREKRQR 80
            R S   F+  E A+L +GV+KYG G+W  IL+   FH  RTA  LKD++RN+ +  + EK+QR
Sbjct:    8 RGSKRAFADWEIANLRKGVKKYGCGRWGWILSTGTFHPSRTAQSLKDRWRNVEKHDQDEKKQR 70          
BLAST of Ggra4394.t1 vs. uniprot
Match: A0A8H3I9L1 (Uncharacterized protein n=1 Tax=Gomphillus americanus TaxID=1940652 RepID=A0A8H3I9L1_9LECA)

HSP 1 Score: 55.5 bits (132), Expect = 3.190e-6
Identity = 36/80 (45.00%), Postives = 49/80 (61.25%), Query Frame = 0
Query:    7 TVAKATRKKGRRESYTR--FSASEEAHLLEGVRKYGAGKWKKILTCYEFH--RKRTAVDLKDKYRNIMRAQEREKRQRLE 82
            TV    RK+ R +S  R  ++  E A LLEGV+KYG G+WK IL   +FH   +RT +DLKD+YR    A++R K +  E
Sbjct:  171 TVGTNWRKQKRVQSRGRVHWTEQETADLLEGVKKYGLGRWKNILIDEDFHFNPRRTGIDLKDRYRTYCIAKDRAKAELAE 250          
The following BLAST results are available for this feature:
BLAST of Ggra4394.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 20
Match NameE-valueIdentityDescription
A0A2V3J8B94.970e-1856.10Telomere-associated protein 1 n=1 Tax=Gracilariops... [more]
M2VTP07.280e-1150.72DNA-binding protein n=1 Tax=Galdieria sulphuraria ... [more]
L1JWB72.020e-747.27Uncharacterized protein n=2 Tax=Guillardia theta T... [more]
L8GYK35.290e-754.84Myblike DNA-binding domain containing protein n=1 ... [more]
A0A7S0DGD06.160e-744.30Hypothetical protein (Fragment) n=1 Tax=Amorphochl... [more]
A0A2R5GZ317.050e-756.00Telomere repeat-binding protein 2 n=1 Tax=Hondaea ... [more]
E1ZHV51.870e-651.92Uncharacterized protein n=1 Tax=Chlorella variabil... [more]
A0A6D2JUL92.360e-650.88Uncharacterized protein n=5 Tax=Coluteocarpeae Tax... [more]
A0A6U2CJB62.900e-646.03Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]
A0A8H3I9L13.190e-645.00Uncharacterized protein n=1 Tax=Gomphillus america... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainSMARTSM00717santcoord: 20..72
e-value: 4.3E-7
score: 39.6
IPR001005SANT/Myb domainPROSITEPS50090MYB_LIKEcoord: 16..70
score: 6.225654
NoneNo IPR availableGENE3D1.10.246.220coord: 24..93
e-value: 3.2E-18
score: 67.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 80..102
NoneNo IPR availablePANTHERPTHR46734:SF1TELOMERIC REPEAT-BINDING FACTOR 1coord: 11..83
NoneNo IPR availablePANTHERPTHR46734TELOMERIC REPEAT-BINDING FACTOR 1 TERF1coord: 11..83
NoneNo IPR availableCDDcd11660SANT_TRFcoord: 23..71
e-value: 5.34008E-19
score: 72.9851
IPR017930Myb domainPFAMPF00249Myb_DNA-bindingcoord: 23..69
e-value: 4.3E-9
score: 36.4
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 23..74
score: 11.315141
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 23..76

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000898_piloncontigtig00000898_pilon:168326..168748 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra4394.t1Ggra4394.t1Gracilaria gracilis GNS1m malemRNAtig00000898_pilon 168326..168748 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra4394.t1 ID=Ggra4394.t1|Name=Ggra4394.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=141bp
MKITGRTVAKATRKKGRRESYTRFSASEEAHLLEGVRKYGAGKWKKILTC
YEFHRKRTAVDLKDKYRNIMRAQEREKRQRLERVGVGKGSSNMSEGLVGG
GGCIPRGTNDDVSVNGREKRIEAPSAMKLTRLLCEPEESY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR017930Myb_dom
IPR009057Homeobox-like_sf