Ggra4352.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra4352.t1
Unique NameGgra4352.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length282
Homology
BLAST of Ggra4352.t1 vs. uniprot
Match: A0A2V3IQY3 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQY3_9FLOR)

HSP 1 Score: 382 bits (981), Expect = 6.550e-132
Identity = 197/241 (81.74%), Postives = 220/241 (91.29%), Query Frame = 0
Query:   41 MGRRSEKIKGRKDAQSQAKAKVFARVGKMITMAAKQGGPDVVANRALADAIEAAKRVSFPKDTMEKAIARATSPDQADYKRSSFEAYGHGGAAIYIDVLTDNPNRAAADIRTAINKSKFKIASPGSVAFNFERMGKIHVPKNSVPDEDELFMAAVDAGAEECEVDPDDESMYRILTDAASLFDAQKGLEGAGVHIELAQLAMVPKTVVSVSEEDMEKNMDGIDMIQAVEDVDDVFINATLE 281
            MGRRSEKIKGRK+AQSQAKAKVFAR+GKMITMAAKQGGPD+VAN+ LADAIEAAK   FPKDTMEKAIARATSPDQADYK+SSFEAYGHGGAAIYIDVLTDNPNRAAADIRTAINKSKFKIASPGSVAFNF+RMG IHVP + V D D L MAA+DAGAEEC++D   +S YRILT+A++L +A+KGLE AG  IELAQLAM+PKT V+VSEEDMEKN +GIDM+QAVEDVDDVF+NA++E
Sbjct:    1 MGRRSEKIKGRKEAQSQAKAKVFARIGKMITMAAKQGGPDIVANKPLADAIEAAKSARFPKDTMEKAIARATSPDQADYKQSSFEAYGHGGAAIYIDVLTDNPNRAAADIRTAINKSKFKIASPGSVAFNFDRMGLIHVPVDCVEDADHLLMAAIDAGAEECDIDSQHKSRYRILTNASALHEARKGLEQAGYQIELAQLAMIPKTWVNVSEEDMEKNAEGIDMLQAVEDVDDVFVNASVE 241          
BLAST of Ggra4352.t1 vs. uniprot
Match: R7QSU8 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QSU8_CHOCR)

HSP 1 Score: 335 bits (858), Expect = 1.340e-112
Identity = 172/254 (67.72%), Postives = 209/254 (82.28%), Query Frame = 0
Query:   26 RFARKCSRTPPKHVYMGRRSEKIKGRKDAQSQAKAKVFARVGKMITMAAKQGGPDVVANRALADAIEAAKRVSFPKDTMEKAIARATSPDQADYKRSSFEAYGHGGAAIYIDVLTDNPNRAAADIRTAINKSKFKIASPGSVAFNFERMGKIHVPKNSVPDEDELFMAAVDAGAEECEVDPDDESMYRILTDAASLFDAQKGLEGAGVHIELAQLAMVPKTVVSVSEEDMEKNMDGIDMIQAVEDVDDVFINAT 279
            R A  C +     + MGRRSEKIKGRKDAQ+  + KVFAR+GKMITMAAK GGPDV+AN+ALADAI+ AK  SFPKDTMEKAIARATS DQAD+K SSFEAYGHGG  IYIDVLTDN NRA+ADIRTA+NKSK KIASPGSVAFNF+R G I V   SV D DEL +AA+DAGAEECE+D +D+S+YR++T+ A+L  A+K LE  G  +++AQL MVPK +V+VSE+DME+N+ G+DM+Q++EDVD V++NAT
Sbjct:   26 RRAAVCPKEGAHGLRMGRRSEKIKGRKDAQNAQRTKVFARIGKMITMAAKAGGPDVIANKALADAIDTAKAASFPKDTMEKAIARATSVDQADFKESSFEAYGHGGTGIYIDVLTDNTNRASADIRTALNKSKLKIASPGSVAFNFDRKGVIQVIAGSVTDADELLLAAIDAGAEECELDDNDDSVYRVITEPANLTPARKALETNGYAVDIAQLEMVPKALVTVSEDDMERNLHGVDMLQSLEDVDGVYMNAT 279          
BLAST of Ggra4352.t1 vs. uniprot
Match: A0A7S2ZYP0 (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZYP0_9RHOD)

HSP 1 Score: 220 bits (561), Expect = 2.760e-67
Identity = 112/240 (46.67%), Postives = 161/240 (67.08%), Query Frame = 0
Query:   25 SRFARKCSRTPPKHVYMGRRSEKIKGRKDAQSQAKAKVFARVGKMITMAAKQGGPDVVANRALADAIEAAKRVSFPKDTMEKAIARATSPDQADYKRSSFEAYGHGGAAIYIDVLTDNPNRAAADIRTAINKSKFKIASPGSVAFNFERMGKIHVPKNSVPDEDELFMAAVDAGAEECEVDPDDESMYRILTDAASLFDAQKGLEGAGVHIELAQLAMVPKTVVSVSEEDMEKNMDGIDM 264
            +R + + SR   + V MGRRSEKIKGRK+ Q +AK KV+AR+GK+IT A K GG +   N+ LAD +E A+  + PKD +E+AI RA S DQADYK S+FE YGHGG  I +DVLTDN NRAA++IR  +NK   KIASPGSV FNF+R G I +    + D DE F+ A +AGAE+C ++   + +  ++T+  +    +K L  +G+ ++ + L ++PKT VS+ + + +KN   I++
Sbjct:   27 NRTSERVSRGRSRVVMMGRRSEKIKGRKEKQDRAKVKVYARIGKLITAAVKSGGAEAETNKGLADVLELARASNVPKDNVERAIQRAASKDQADYKESTFELYGHGGVGIIVDVLTDNNNRAASEIRAVVNKHNLKIASPGSVGFNFDRKGVIRIRSELIKDFDEFFLEAAEAGAEDCLME---DEICTVITEVQNFDSVRKVLIASGLSVDSSALELIPKTTVSIEDAEADKNATAIEV 263          
BLAST of Ggra4352.t1 vs. uniprot
Match: A0A5J4YPQ7 (Putative transcriptional regulatory protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YPQ7_PORPP)

HSP 1 Score: 201 bits (510), Expect = 7.830e-60
Identity = 116/259 (44.79%), Postives = 166/259 (64.09%), Query Frame = 0
Query:   24 QSRFARKCSRTPPKHVYMGRRSEKIKGRKDAQSQAKAKVFARVGKMITMAAKQGGPDVVANRALADAIEAAKRVSFPKDTMEKAIARATSPDQADYKRSSFEAYGHGGAAIYIDVLTDNPNRAAADIRTAINKSKFKIASPGSVAFNFERMGKIHVPKNSVPDE----DELFMAAVDAGAEECEVDPDDESMYRILTDAASLFDAQKGLEGA-GVHIELAQLAMVPKTVVSVSEEDMEKNMDGIDMIQAVEDVDDVFIN 277
            Q   A +C R   + VYMGRRSEKI  RK  Q + + K+FARVGK I  A ++GG +V +N ALA A++AA+  +FPKD +E+ + +ATS DQ DYK S FE YGH G  + I V TDN NRA +++RT +N+ +  +AS GSV++NF++ G + +    VP E    DEL M A++AGAEECE   + ++ + + T+A  L   ++ L+   G  IE A+L MVP+T   VSEE  EKN   +D ++ ++DVD +F N
Sbjct:   33 QGAVAVRCRRVAAR-VYMGRRSEKIATRKGKQEKLRTKLFARVGKQIIAAIREGGDNVESNAALASALDAARAANFPKDNVERLMKKATSTDQEDYKVSLFEVYGHEGVGLLIQVFTDNNNRAISEMRTILNRQQVSMASAGSVSYNFDKKGMLLL--RGVPSEGEQADELLMNAIEAGAEECEFSEEHDA-FELFTEATDLMAVKQALQQEHGYAIERAELVMVPRTRCEVSEEAAEKNFTLMDALEDLDDVDQIFHN 287          
BLAST of Ggra4352.t1 vs. uniprot
Match: A0A1X6PFU6 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PFU6_PORUM)

HSP 1 Score: 196 bits (497), Expect = 5.750e-57
Identity = 114/242 (47.11%), Postives = 152/242 (62.81%), Query Frame = 0
Query:   34 TPPKHVYMGRRSEKIKGRKDAQSQAKAKVFARVGKMITMAAKQGGP-DVVANRALADAIEAAKRVSFPKDTMEKAIARATSPDQADYKRSSFEAYGHGGAAIYIDVLTDNPNRAAADIRTAINKSKFKIASPGSVAFNFERMGKIHV---PKNSVPDEDELFMAAVDAGAEECE----------VDPDDESMYRILTDAASLFDAQKGLEGAGVHIELAQLAMVPKTVVSVSEEDMEKNMDG 261
            TPP    MGRRSEKI GRKDAQ++ K +++AR+GK +  A K GG  D VANR LADA+ AA   +FPK+ +E+A  RA + DQAD+K SSFE YG GG  + +DV TDN NRAAADIR A+ K+  K+AS GSVAFNF+R G + V   P ++  +   + +AA+DAGAEECE           D D +  Y + T+   L   +  +  AG  +  A+LAMVP+  + V++ D E N  G
Sbjct:   76 TPPT---MGRRSEKIAGRKDAQNRLKTRLYARIGKTLIAAIKAGGSTDPVANRPLADALAAAAAANFPKENIERAFERANATDQADFKTSSFEVYGAGGVGLLVDVWTDNANRAAADIRQAVGKAGMKVASVGSVAFNFDRKGVVEVAGEPGDAAAEA--VLLAAIDAGAEECEWADWAPDEGAADGDGDGRYVLTTEGGELMATKAAMADAGYRVVRAELAMVPRVRMEVADADREANERG 312          
BLAST of Ggra4352.t1 vs. uniprot
Match: A0A836C9R2 (Transcriptional regulator TACO1-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9R2_9STRA)

HSP 1 Score: 185 bits (470), Expect = 8.340e-54
Identity = 111/237 (46.84%), Postives = 148/237 (62.45%), Query Frame = 0
Query:   39 VYMGRRSEKIKGRKDAQSQAKAKVFARVGKMITMAAKQGGPDVVANRALADAIEAAKRVSFPKDTMEKAIARATSPDQADYKRSSFEAYGHGGAAIYIDVLTDNPNRAAADIRTAINKSKFKIASPGSVAFNFERMGKIHVPKNSVPDEDELFMAAVDAGAEECEV-DPDDESMYRILTDAASLFDAQKGLEGAGVHIELAQLAMVPKTVVSVSEEDMEKNMDGIDMIQAVEDVDDV 274
            V MGRR+EKI   K+     + K+FAR+GK I MA K GGP   AN+ L+D I+ AK  + PKD +++AI RAT   Q DYK +S+EAYGHGG  + I  LTDN NRA ADIRT   K   K+AS GSVAF F R GKI V  N+V DE+++  AA+ A  ++ EV + ++E    +LTD + L     GL   G+  E   LA +P  VV VS+ DME N+  I+ ++ ++DVD V
Sbjct:   53 VMMGRRAEKIARTKEKGDLKRTKIFARIGKKIIMAVKAGGPSEDANKLLSDLIKEAKLYNVPKDNIQRAIKRATEGTQGDYKENSYEAYGHGGIGLIITALTDNVNRANADIRTLGTKKGLKMASSGSVAFQFTRRGKIEV--NAVLDEEQVIEAAIAADVDDVEVVEGEEEGTSWVLTDPSMLSMLVDGLAAVGITGE-PSLAHIPNEVVEVSDVDMELNLAAIEALEGLDDVDQV 286          
BLAST of Ggra4352.t1 vs. uniprot
Match: A0A6M1ZU54 (Probable transcriptional regulatory protein KR126chlam2_00635 n=1 Tax=Chlamydiae bacterium TaxID=2081524 RepID=A0A6M1ZU54_9BACT)

HSP 1 Score: 182 bits (463), Expect = 1.990e-53
Identity = 101/233 (43.35%), Postives = 148/233 (63.52%), Query Frame = 0
Query:   48 IKGRKDAQSQAKAKVFARVGKMITMAAKQGGPDVVANRALADAIEAAKRVSFPKDTMEKAIARATSPDQADYKRSSFEAYGHGGAAIYIDVLTDNPNRAAADIRTAINKSKFKIASPGSVAFNFERMGKIHVPKNSVPDEDELFMAAVDAGAEECEVDPDDESMYRILTDAASLFDAQKGLEGAGVHIELAQLAMVPKTVVSVSEEDMEKNMDGIDMIQAVEDVDDVFINATL 280
            IK +KD   + K K+F+R  K I  A K GGPD  +N  L  AI+ AK ++ P D +E+ I +A +PDQAD+   ++E YGHGG  I +D +TDN NR A+D+R A NK    IASPGSVAF+F+R G I V K+++ DED+LF  A++AGAE+ E     E  Y I TD + L+  ++ LE  G  ++ A++ M+P+T++   EE  + NM  I+ ++ +EDV+ V+ N  L
Sbjct:   10 IKHKKDRADKQKGKLFSRHAKEIISAVKLGGPDPKSNSRLRLAIQKAKAINMPSDNIERNIKKAANPDQADFLPLTYEIYGHGGVGIIVDAVTDNKNRTASDMRIATNKRGGTIASPGSVAFSFDRKGVIQVGKSAI-DEDKLFQEAIEAGAEDFE---SAEESYMITTDPSELYAVKEKLEAKGFKVDEAEIEMIPQTLIECDEETSKSNMALIEWLEDLEDVNAVYHNLDL 238          
BLAST of Ggra4352.t1 vs. uniprot
Match: A0A8E6FJ67 (Probable transcriptional regulatory protein KFB93_03395 n=1 Tax=Simkaniaceae bacterium TaxID=2698248 RepID=A0A8E6FJ67_9BACT)

HSP 1 Score: 181 bits (460), Expect = 5.630e-53
Identity = 102/230 (44.35%), Postives = 142/230 (61.74%), Query Frame = 0
Query:   48 IKGRKDAQSQAKAKVFARVGKMITMAAKQGGPDVVANRALADAIEAAKRVSFPKDTMEKAIARATSPDQADYKRSSFEAYGHGGAAIYIDVLTDNPNRAAADIRTAINKSKFKIASPGSVAFNFERMGKIHVPKNSVPDEDELFMAAVDAGAEECEVDPDDESMYRILTDAASLFDAQKGLEGAGVHIELAQLAMVPKTVVSVSEEDMEKNMDGIDMIQAVEDVDDVFIN 277
            IK +K+     K K+F+RV K I  A KQGGPD  AN  L  A++ AK  + P D +++ I +A S DQAD+   ++E YGHGG  I +D +TDN NR A+D+R A NK    IASPGSVAFNF+R G + V K+   DE+ LFM A DAGA++ +V    E  + ++T    L++ ++ LEG G+ I+ A L M+PKT+V       E N   ID ++ ++DVD VF N
Sbjct:   10 IKHKKERADAKKGKIFSRVAKEIISAVKQGGPDPKANTKLRLALQKAKGANVPSDVIDRNIKKAASADQADFADLTYELYGHGGVGIIVDAMTDNKNRTASDMRIATNKKGGSIASPGSVAFNFDRKGVLQVGKDQ-GDEESLFMQATDAGADDFDVT---EEGFIVVTPPEMLYEVKEKLEGDGISIQEASLEMIPKTMVECDPSTKEANQGLIDFLENLDDVDVVFHN 235          
BLAST of Ggra4352.t1 vs. uniprot
Match: F8L5L4 (Probable transcriptional regulatory protein SNE_A18750 n=1 Tax=Simkania negevensis (strain ATCC VR-1471 / Z) TaxID=331113 RepID=F8L5L4_SIMNZ)

HSP 1 Score: 178 bits (452), Expect = 8.700e-52
Identity = 96/229 (41.92%), Postives = 147/229 (64.19%), Query Frame = 0
Query:   49 KGRKDAQSQAKAKVFARVGKMITMAAKQGGPDVVANRALADAIEAAKRVSFPKDTMEKAIARATSPDQADYKRSSFEAYGHGGAAIYIDVLTDNPNRAAADIRTAINKSKFKIASPGSVAFNFERMGKIHVPKNSVPDEDELFMAAVDAGAEECEVDPDDESMYRILTDAASLFDAQKGLEGAGVHIELAQLAMVPKTVVSVSEEDMEKNMDGIDMIQAVEDVDDVFIN 277
            KGR DA+   K KVF+R+ K I  + KQGGPD  +N  L  A++ A+  + P + +E+ I +A+S DQ+D+   ++E YGHGG  I +D +TDN NR A+D+R A NK    IASPGSV++NF+R G I + K+   DE+ LF+   +AGAE+ ++D   + +Y ++T    L++ ++ LE  G+    A L M+PKT V  SEED + N++ I+ ++ ++DVD VF N
Sbjct:   14 KGRADAK---KGKVFSRIAKEIISSVKQGGPDPKSNTKLRIALQKARIANVPAENIERNIKKASSNDQSDFSELTYELYGHGGVGIIVDAMTDNKNRTASDMRIATNKKGGTIASPGSVSYNFDRKGVIQIGKDQ-GDEETLFLQVTEAGAEDFDMD---DELYLVITSVEQLYEVKEKLEEQGITCSEASLEMIPKTTVECSEEDQKANLELIEFLEDLDDVDVVFHN 235          
BLAST of Ggra4352.t1 vs. uniprot
Match: A0A6T8GU84 (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6T8GU84_HEMAN)

HSP 1 Score: 179 bits (453), Expect = 5.790e-51
Identity = 102/241 (42.32%), Postives = 145/241 (60.17%), Query Frame = 0
Query:   39 VYMGRRSEKIKGRKDAQSQAKAKVFARVGKMITMAAKQGGPDVVANRALADAIEAAKRVSFPKDTMEKAIARATSPDQADYKRSSFEAYGHGGAAIYIDVLTDNPNRAAADIRTAINKSKFKIASPGSVAFNFERMGKIHVPKNSVPDEDELFMAAVDAGAEECEVDP--DDESMYRILTDAASLFDAQKGLEGAGVHIELAQLAMVPKTVVSVSEEDMEKNMDGIDMIQAVEDVDDVFIN 277
            V MGR + K    K     AK K+ +R GKM+TM  K GG D +AN ALA  +  AK+   P   ME  I RA + DQAD+K S++E YG GG    ID+LTDN NRAA D+RT +NK+K K+A PGSVAFNF+ +G + V  +    ED++  AA++AGA++ E     +D + + + T+  SL      ++  G  ++ A+    PK  + VSEED   N+D IDM++ ++DVD V+ N
Sbjct:   76 VMMGRAAAKRAVTKGKTDLAKTKLNSRYGKMVTMCVKAGGTDPIANPALAKLLVQAKQAGVPVANMENVIKRANNKDQADFKESTYEVYGQGGIGFVIDILTDNNNRAAGDVRTVLNKNKLKMAEPGSVAFNFDHVGCVTVITDK--GEDDVTEAALEAGADDLEETDLGEDGAGFNVYTEMTSLMAVSDSMKDQGFEVKEARFIWKPKGPIEVSEEDETANLDAIDMLEELDDVDAVWHN 314          
The following BLAST results are available for this feature:
BLAST of Ggra4352.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IQY36.550e-13281.74Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QSU81.340e-11267.72Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S2ZYP02.760e-6746.67Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A5J4YPQ77.830e-6044.79Putative transcriptional regulatory protein n=1 Ta... [more]
A0A1X6PFU65.750e-5747.11Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A836C9R28.340e-5446.84Transcriptional regulator TACO1-like protein n=1 T... [more]
A0A6M1ZU541.990e-5343.35Probable transcriptional regulatory protein KR126c... [more]
A0A8E6FJ675.630e-5344.35Probable transcriptional regulatory protein KFB93_... [more]
F8L5L48.700e-5241.92Probable transcriptional regulatory protein SNE_A1... [more]
A0A6T8GU845.790e-5142.32Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR017856Integrase-like, N-terminalGENE3D1.10.10.200coord: 44..118
e-value: 9.4E-19
score: 69.6
IPR026564Transcriptional regulator TACO1-like, domain 3GENE3D3.30.70.980coord: 167..246
e-value: 6.4E-42
score: 145.0
IPR026564Transcriptional regulator TACO1-like, domain 3GENE3D3.30.70.980coord: 124..277
e-value: 6.4E-42
score: 145.0
IPR002876Transcriptional regulator TACO1-likePFAMPF01709Transcrip_regcoord: 45..278
e-value: 1.4E-65
score: 221.1
IPR002876Transcriptional regulator TACO1-likeTIGRFAMTIGR01033TIGR01033coord: 42..278
e-value: 9.8E-65
score: 216.6
IPR002876Transcriptional regulator TACO1-likePANTHERPTHR12532UNCHARACTERIZEDcoord: 28..278
IPR002876Transcriptional regulator TACO1-likeHAMAPMF_00693Transcrip_reg_TACO1coord: 41..280
score: 25.652637
IPR029072YebC-likeSUPERFAMILY75625YebC-likecoord: 41..279

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000898_piloncontigtig00000898_pilon:24254..25099 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra4352.t1Ggra4352.t1Gracilaria gracilis GNS1m malemRNAtig00000898_pilon 24254..25099 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra4352.t1 ID=Ggra4352.t1|Name=Ggra4352.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=282bp
MEATRGNSTAFAPSALSAFTRPCQSRFARKCSRTPPKHVYMGRRSEKIKG
RKDAQSQAKAKVFARVGKMITMAAKQGGPDVVANRALADAIEAAKRVSFP
KDTMEKAIARATSPDQADYKRSSFEAYGHGGAAIYIDVLTDNPNRAAADI
RTAINKSKFKIASPGSVAFNFERMGKIHVPKNSVPDEDELFMAAVDAGAE
ECEVDPDDESMYRILTDAASLFDAQKGLEGAGVHIELAQLAMVPKTVVSV
SEEDMEKNMDGIDMIQAVEDVDDVFINATLE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR017856Integrase-like_N
IPR026564Transcrip_reg_TACO1-like_dom3
IPR002876Transcrip_reg_TACO1-like
IPR029072YebC-like