Ggra4346.t1 (polypeptide) Gracilaria gracilis GNS1m male
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Overview
Homology
BLAST of Ggra4346.t1 vs. uniprot
Match: A0A2V3IQY1 (Phycobilisome 39 kDa linker polypeptide, phycocyanin-associated, rod n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQY1_9FLOR) HSP 1 Score: 376 bits (965), Expect = 4.860e-129 Identity = 194/275 (70.55%), Postives = 221/275 (80.36%), Query Frame = 0
Query: 1 MTHAAFTAPLPLTARPSSFAACQSLSTPTPPRTASTRSTPRMAFSSIDRILTADPVSMPEDVGLVISSVYKQVLGNAHLMQSERDALATAESQFCLTGSIREFVRSIAKSNAYVSRFFEPVSQYRFIELAFKHLLGSAPVSKAQYCAAMAKYHNEGYDACIDWFIDSAEYEDDFGEYIVPYGIYKGCYMTNELFNRSVAMRLTPSSSDKERSTMLQYCVLTGQSPSWLSIAKALPLGTEKGTGYVVGGRYTSTQWNRAAPVR-VGTKIPGGVVFY 274
MT AFTA LPLTARPSSFAACQ L+ P + R++PRMAFSSI+R+LT DPV+ +D LVI ++YKQVLGNA+LMQSER+ L ESQF T +R+FVR++AKSN Y SRFFEPVSQYRFIELAFKHLLGSAPVSKA+Y AMAKYH EGYDACIDWFIDSA+YE DFG++IVPYGIYKG Y TNELFNRSV+MR TPSSSDK RST+LQ+CVL+G SPSWL+I+KALP TE GTGY + S N AP R VG KIPGGVVFY
Sbjct: 1 MTIPAFTASLPLTARPSSFAACQPLTRPQSAPLTARRTSPRMAFSSIERVLTVDPVTANDDTSLVIHAIYKQVLGNAYLMQSEREELTATESQFVFTKDVRQFVRAVAKSNTYRSRFFEPVSQYRFIELAFKHLLGSAPVSKAEYAVAMAKYHQEGYDACIDWFIDSADYETDFGDFIVPYGIYKGIYKTNELFNRSVSMRYTPSSSDKGRSTLLQFCVLSGDSPSWLAISKALPPRTEGGTGYNISSSSASVPSNSNAPPRPVGVKIPGGVVFY 275
BLAST of Ggra4346.t1 vs. uniprot
Match: R7QHH5 (PBS-linker domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QHH5_CHOCR) HSP 1 Score: 329 bits (843), Expect = 1.710e-110 Identity = 165/244 (67.62%), Postives = 194/244 (79.51%), Query Frame = 0
Query: 33 TASTRSTPR--MAFSSIDRILTADPVSMPEDVGLVISSVYKQVLGNAHLMQSERDALATAESQFCLTGSIREFVRSIAKSNAYVSRFFEPVSQYRFIELAFKHLLGSAPVSKAQYCAAMAKYHNEGYDACIDWFIDSAEYEDDFGEYIVPYGIYKGCYMTNELFNRSVAMRLTPSSSDKERSTMLQYCVLTGQSPSWLSIAKALPLGTEKGTGYVVGGRYTSTQWNRAAPVRVGTKIPGGVVFY 274
T++ R TP MAFSSID +LT P SMP D VIS+V+ QVLGNA+LM+SER LA E+ FC TG++R FV +IAKS+AY SRFF PVSQYRFIELAFKHLL AP SK +Y AAM YH++GYDACIDWF+ S EY ++FG++ VPY YKGC+ TNE FNRSVAMRLTPSSSDK R++MLQY V G SP+WLSIAKALP GTEKGTG+ +GG +TSTQ N +PVR+GTKIPGGVVFY
Sbjct: 33 TSAARRTPAITMAFSSIDGVLTPAPTSMPSDKADVISAVFNQVLGNAYLMESERAELAAPEATFCQTGNVRAFVAAIAKSHAYSSRFFNPVSQYRFIELAFKHLLARAPSSKNEYAAAMNVYHSKGYDACIDWFVQSDEYHENFGDFTVPYQYYKGCWRTNETFNRSVAMRLTPSSSDKARNSMLQYPVCAGSSPNWLSIAKALPPGTEKGTGFTIGGHWTSTQRNTRSPVRIGTKIPGGVVFY 276
BLAST of Ggra4346.t1 vs. uniprot
Match: A0A291FEB0 (LR2 n=1 Tax=Griffithsia pacifica TaxID=35689 RepID=A0A291FEB0_GRIPA) HSP 1 Score: 309 bits (791), Expect = 1.350e-102 Identity = 151/234 (64.53%), Postives = 181/234 (77.35%), Query Frame = 0
Query: 39 TPRMAFSSIDRILTADPVSMPEDVGLVISSVYKQVLGNAHLMQSERDALATAESQFCLTGSIREFVRSIAKSNAYVSRFFEPVSQYRFIELAFKHLLGSAPVSKAQYCAAMAKYHNEGYDACIDWFIDSAEYEDDFGEYIVPYGIYKGCYMTNELFNRSVAMRLTPSSSDKERSTMLQYCVLTGQSPSWLSIAKALPLGTEKGTGYVVGGRYTSTQWNRAAPVRVGTKIPGGVV 272
T MAFSSIDRILTADPV+ P VI + Y QV GNAH+M SER+ LATAES C TG++REFVR+I S Y SRFF VSQYRFIEL FKH+LG AP S+A+Y AMA Y+ +GY+ + WF+DS EY ++FG +IVPYGIY+GCY +NELFNRSVAMRL P SDK RS MLQYCVL+G SP+WLSI+KALP GTEKGTG +GG + S+Q N+ APV+ +KIPGGV+
Sbjct: 39 TTSMAFSSIDRILTADPVAFPNGTESVIRATYIQVFGNAHVMDSEREELATAESNVCRTGNVREFVRAIVLSENYKSRFFYSVSQYRFIELMFKHILGRAPESRAEYAEAMAVYNTKGYEPLVSWFVDSLEYNENFGSWIVPYGIYQGCYSSNELFNRSVAMRLAPGCSDKGRSAMLQYCVLSGDSPNWLSISKALPAGTEKGTGLCIGGHWQSSQRNKQAPVKGKSKIPGGVI 272
BLAST of Ggra4346.t1 vs. uniprot
Match: A0A1X6NTF5 (PBS-linker domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NTF5_PORUM) HSP 1 Score: 245 bits (625), Expect = 5.510e-78 Identity = 135/236 (57.20%), Postives = 166/236 (70.34%), Query Frame = 0
Query: 42 MAFSSIDRILTADPVSMPE-DVGLVISSVYKQVLGNAHLMQSERDALATAESQFCLTGSIREFVRSIAKSNAYVSRFFEPVSQYRFIELAFKHLLGSAPVSKAQYCAAMAKYHNEGYDA-CIDWFIDSAEYEDDFGEYIVPYGIYKGCYMTNELFNRSVAMRLTPSSSDKERSTM--LQYCVLTGQSPSWLSIAKALPLGTEKGTGYVVGGRYTSTQWNRAAPVRVGTKIPGGVVF 273
MAFSSI +LT PVS+PE V I++VYKQVLGNAHLM+SER LATAESQF LT +R FVR++ S+A+ SRFF+ S RF ELAFKH LG P +A++ AAMA YH+ G A +DW ++S EY + FG+ VPY ++KG Y TNE FNR + +R SSSDK + L V G SP+WLSI+K LP GTE+GTG+V+ R+TSTQ N APVRVG KIPGGVVF
Sbjct: 1 MAFSSIQNVLTDAPVSVPEASVADAITAVYKQVLGNAHLMESERAELATAESQFALTTDVRAFVRAVGVSSAHTSRFFDSGSLVRFTELAFKHFLGRGPRDRAEWAAAMAAYHSGGGVAGVVDWCVNSDEYAEAFGDSTVPYCMFKGAYPTNEEFNRMLVLRGPWSSSDKVAGGVDRLAGAVAGGSSPNWLSISKGLPAGTERGTGFVIASRWTSTQRNPKAPVRVGRKIPGGVVF 236
BLAST of Ggra4346.t1 vs. uniprot
Match: A0A7S0ZF99 (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZF99_9RHOD) HSP 1 Score: 218 bits (556), Expect = 7.180e-67 Identity = 123/249 (49.40%), Postives = 159/249 (63.86%), Query Frame = 0
Query: 43 AFSSIDRILTADPVSM----------------PEDVGLVISSVYKQVLGNAHLMQSERDALATAESQFCLTGSIREFVRSIAKSNAYVSRFFEPVSQYRFIELAFKHLLGSAPVSKAQYCAAMAKYHNEGYDACIDWFIDSAEYEDDFGEYIVPYGIYKGCYMTNELFNRSVAMRLTPSSSDKERS--TMLQYCVLTGQSPSWLSIAKALPLGTEKGTGYVVGGRYTSTQWNRAAPVRVGTKIPGGVVF 273
AFSSI +LT P ++ P+++ VI++VYKQ GNAH+M+SE++ LA ES+F ++ S+REFVR++AKSNAY SRF + SQYRF EL FKHLLG P S+A+ A Y G+ A ID +DS EY +FG+ +VPY +KG Y TNE FNR + ++ TPSSSDK + L Y + TG S +WLS+ K LP GTE+GTG+ Y S NR A RVGTKIPGGVVF
Sbjct: 42 AFSSIQGVLTDSPRALVSEMSSNGADGVPKANPQELDEVIAAVYKQTFGNAHIMESEKEELAVFESEFRISRSVREFVRALAKSNAYTSRFLDGNSQYRFFELNFKHLLGRGPRSQAEIATHFAIYAEGGFTAVIDAIVDSEEYSSEFGDVVVPYCRFKGMYPTNEEFNRMLVLKGTPSSSDKASKGRSKLCYSIATGGSQNWLSMTKGLPFGTERGTGFQ--NAYPSR--NRNAKTRVGTKIPGGVVF 286
BLAST of Ggra4346.t1 vs. uniprot
Match: A0A5J4Z7F4 (Phycobilisome 31.8 kDa linker polypeptide, phycoerythrin-associated, rod n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z7F4_PORPP) HSP 1 Score: 205 bits (522), Expect = 1.520e-61 Identity = 122/263 (46.39%), Postives = 155/263 (58.94%), Query Frame = 0
Query: 30 PPRTASTRSTPRMAFSSIDRILTADPVSMPEDVGLV-----------------ISSVYKQVLGNAHLMQSERDALATAESQFCLTGSIREFVRSIAKSNAYVSRFFEPVSQYRFIELAFKHLLGSAPVSKAQYCAAMAKYHNEGYDACIDWFIDSAEYEDDFGEYIVPYGIYKGCYMTNELFNRSVAMRLTPSSSDK--ERSTMLQYCVLTGQSPSWLSIAKALPLGTEKGTGYVVGGRYTSTQWNRAAPVRVGTKIPGGVVF 273
P R AS MAFSSI +LT P+ P +G + + +VYKQV GNAH+M+SER L AES F +REFVR++AKSNAY SRF + QYRF EL FKHLLG P S + + A Y G++A ID +DS EY +FG +VPY +KG Y TNE FNR + ++ S+SDK + + L Y + G S +WLS++KALP GTEKGTG+ S+ N AA R+GTKIPGGVVF
Sbjct: 43 PRRAASASQVKMMAFSSIQNVLTDAPLGTPSAMGFLDERTEKPLMGPSEMDELVYAVYKQVFGNAHIMESERAELRDAESLFRYLRDVREFVRALAKSNAYTSRFLQGNQQYRFFELNFKHLLGRGPRSLEEMASHSALYAEGGFEAVIDAILDSDEYAQEFGSTVVPYCRFKGEYPTNEEFNRMLVLKGANSTSDKAGKGRSKLCYSIAAGCSQNWLSMSKALPFGTEKGTGF----NLISSSRNPAARPRIGTKIPGGVVF 301
BLAST of Ggra4346.t1 vs. uniprot
Match: A0A1X6P2M1 (PBS-linker domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P2M1_PORUM) HSP 1 Score: 145 bits (365), Expect = 1.650e-36 Identity = 75/154 (48.70%), Postives = 106/154 (68.83%), Query Frame = 0
Query: 60 EDVGLVISSVYKQVLGNAHLMQSERDALATAESQFCLTGSIREFVRSIAKSNAYVSRFFEPVSQYRFIELAFKHLLGSAPVSKAQYCAAMAKYHNEGYDACIDWFIDSAEYEDDFGEYIVPYGIYKGCYMTNELFNRSVAMRLTPSSSDKERST 213
++ + + +VYK VLGNAHLM+SER LA +ES F TG+ +EFVR++A+S+AY +R+FEPV+ RF+EL +K++LG AP S+A+Y MA EGY A I+ +DSAEY+ FGE VP ++G + TN NR + + SSSDK +ST
Sbjct: 191 DEKAIAVRAVYKNVLGNAHLMESERAELAYSESCFTYTGNAKEFVRAVAQSDAYRTRYFEPVTPMRFVELTYKNILGRAPRSQAEYAGTMAVLQQEGYKAAINSLVDSAEYDSLFGETRVPAVNFRGGHETNNEMNRLAVLSGSASSSDKSKST 344
BLAST of Ggra4346.t1 vs. uniprot
Match: A0A1X6NJ88 (PBS-linker domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NJ88_PORUM) HSP 1 Score: 140 bits (352), Expect = 4.810e-36 Identity = 80/164 (48.78%), Postives = 104/164 (63.41%), Query Frame = 0
Query: 41 RMAFSSIDRILTADPVSMP--EDVGLVISSVYKQVLGNAHLMQSERDALATAESQFCLT-GSIREFVRSIAKSNAYVSRFFEPVSQYRFIELAFKHLLGSAPVSKAQYCAAMAKYHNEGYDACIDWFIDSAEYEDDFGEYIVPYGIYKGCYMTNELFNRSVAMR 201
RMAFSS+D+ V + E + L I +VYKQV GNA+LM+ E LA AESQF L GS+REF+R +AKS AY RF E YR +EL KHLLG PV++A+ + NEG+DA ID ++DS EY D FG+ +VP +++G Y N+ FNR MR
Sbjct: 38 RMAFSSLDKREEEARVQLEDLEAMDLTIRAVYKQVFGNAYLMEEELAGLAVAESQFRLVHGSVREFIRDLAKSEAYKMRFLETAGPYRVVELNTKHLLGRGPVNQAEVSKHVQTLANEGWDADIDSYLDSDEYTDRFGDDVVPRFVFQGTYARNDDFNRMCVMR 201
BLAST of Ggra4346.t1 vs. uniprot
Match: A0A3M9YVT2 (Photosystem I reaction center subunit XII n=2 Tax=unclassified Leptolyngbya TaxID=2650499 RepID=A0A3M9YVT2_9CYAN) HSP 1 Score: 135 bits (341), Expect = 3.530e-35 Identity = 84/171 (49.12%), Postives = 106/171 (61.99%), Query Frame = 0
Query: 55 PVSMPEDVGLVISSVYKQVLGNAHLMQSERDALATAESQFC-LTGSIREFVRSIAKSNAYVSRFFEPVSQYRFIELAFKHLLGSAPVSKAQYCAAMAKYHNEGYDACIDWFIDSAEYEDDFGEYIVPY--GIYKGCYMTNELFNRSVAMRLTPSSSDKE-RSTMLQYCVLT 221
P S EDV +I +VYKQVLGN H+M+SER L AESQ C T ++REFVR +AKS+ Y SR+FEP + YRF+EL FKHLLG AP +A+ + + +GYDA ID +IDS EY+ FGE VPY G ++NR A+ PS D RS+ L Y V T
Sbjct: 7 PTSSLEDVETIIRAVYKQVLGNPHVMESER--LVAAESQLCNRTITVREFVRIVAKSDFYRSRYFEPCAPYRFVELNFKHLLGRAPQDQAEVSEHIRRCVEQGYDAEIDSYIDSDEYQSAFGENRVPYFRGTVSQPGQKQVVYNRMFALDRGPSQIDSAVRSSQLVYAVAT 175
BLAST of Ggra4346.t1 vs. uniprot
Match: A0A2T1LXN9 (Photosystem I reaction center subunit XII n=2 Tax=Chroococcales TaxID=1118 RepID=A0A2T1LXN9_9CHRO) HSP 1 Score: 134 bits (338), Expect = 1.210e-34 Identity = 76/141 (53.90%), Postives = 98/141 (69.50%), Query Frame = 0
Query: 47 IDRILTADPVSMPEDVGLVISSVYKQVLGNAHLMQSERDALATAESQFCL-TGSIREFVRSIAKSNAYVSRFFEPVSQYRFIELAFKHLLGSAPVSKAQYCAAMAKYHNEGYDACIDWFIDSAEYEDDFGEYIVPYGIYKG 186
+DR L S P++V VI +VYKQVLGN H+M SER L TAESQ C T ++REFVR++AKS+ Y R+FE + YRF+EL FKHLLG AP +A+ + NEGYDA ID +IDS EY+D+FG+ +VPY Y+G
Sbjct: 5 LDRPLELRSTSSPDEVAAVIRAVYKQVLGNPHVMDSER--LVTAESQLCNGTLTVREFVRAVAKSDFYRRRYFETCAPYRFVELNFKHLLGRAPQDQAELSKHIQICVNEGYDAEIDSYIDSQEYQDNFGDNVVPY--YRG 141 The following BLAST results are available for this feature:
BLAST of Ggra4346.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Ggra4346.t1 ID=Ggra4346.t1|Name=Ggra4346.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=276bpback to top |