Ggra4344.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra4344.t1
Unique NameGgra4344.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length313
Homology
BLAST of Ggra4344.t1 vs. uniprot
Match: A0A2V3IBH5 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IBH5_9FLOR)

HSP 1 Score: 372 bits (954), Expect = 1.540e-126
Identity = 172/288 (59.72%), Postives = 222/288 (77.08%), Query Frame = 0
Query:   25 AHQKLISSLSYAEDLHLLQSDSSQYLRIAWLPESRNCRPLSIPYSRIEFGTAASPLQNVLLYVTSVIGATKKVFIEIDSSRASGQMLAGNILTQRGWSGIVMHERWSAYESCRTHYEQVQKSLSSIEARVEVVDAGPIEDIERLNSLLNTAEGAGIVDIMMIFTGGGRDINILSKMQSSIARPRILALFYQAYWGMMDRSRIGDGVADESGRERLFTGASLPALVRLAAKSRYRLIWCLRTEPIAIFIREEEQHGIRTIPPNSCMSLSPEWRRDAEAMWDLAQQYEWT 312
            AHQ+++ +L Y E   +LQ+ SS YLR+A LPE+RNCRPL++PYS+IE   +AS L NVL+Y+ +V+GATKK  IEIDS+R  GQ    +  T +GWS +V+ ERWSAYE+CRT+YE +QKSL+  E  +EVVDAG I D+++LNSLL+TAEG G+VD+M +F GGGRD+++ SKM S +ARPR++ALFYQAYWG +DRSR+G GV DE GRER FTGASL ALVR+    RYRL+WC+ +  +AIF+ E E  G+RTI   SC+  S EW+RDAEAMWD AQ YEWT
Sbjct:    3 AHQQIVDALPYREQPLVLQTASSAYLRVASLPEARNCRPLTVPYSKIERVQSASTLHNVLIYIAAVLGATKKTLIEIDSARDYGQRYTASAFTPQGWSAVVLQERWSAYEACRTYYEPIQKSLARTEGNIEVVDAGTISDMQQLNSLLSTAEGVGVVDVMTMFAGGGRDVSLFSKMLSCVARPRVIALFYQAYWGTLDRSRVGAGVEDEHGRERYFTGASLSALVRIGTTVRYRLVWCVPSMAVAIFVDENEGQGLRTISARSCIGRSKEWKRDAEAMWDEAQAYEWT 290          
BLAST of Ggra4344.t1 vs. uniprot
Match: R7QJ78 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QJ78_CHOCR)

HSP 1 Score: 153 bits (386), Expect = 3.110e-40
Identity = 101/319 (31.66%), Postives = 162/319 (50.78%), Query Frame = 0
Query:   19 CTARKEAHQKL--------ISSLSYAEDLHLLQSDSSQYLRIAWLPESRNCRPLSIPYSR--IEFGTAASP-LQNVLLYVTSVIGATKKVFIEIDSSRASGQMLAGNILTQRGWSGIVMHERWSAYESCRTHYEQVQKSLSS--IEARVEVVDAGPIEDIERLNSLLNTAEGAGIVDIMMIFTGGGRDINILSKMQSSIARPRILALFYQAYWGM--------MDRSRIGDGVADESGRERLFTGASLPALVRLAAKSRYRLIWCLRTEPIAIFI--REEEQHGIRTIPPNSCMSL---SPEWRRDAEAMWDLAQQYEW 311
            CTA ++AH  L        IS+ S  + + L    +      + L    NC P      R  +EF   A+     VLLY+ S+IGA  ++ +E+ S+      +       +GW  + + E W+ Y++ +  YEQ      S   EA V+V+DAG +     L +   T    G+VD++++F  GG DI I+S + +S+ +PR+L + Y+ YWG         + R  + + +    G    ++GAS+ +L  +AA+  YRL+WCL  EPIAI +  +     G+ T+ P SC+ +     +WRRD EAMWD AQ+Y+W
Sbjct:   36 CTATRQAHALLLHVIQNLGISASSSVDTIPLSPRHAVVRRLSSSLLSHTNCLPTLSRRGRRSLEFSLHANTHTDGVLLYIFSIIGARNRIAVELHSN--DDAKICTMFAVHQGWRVVTLVESWAGYDAAQRWYEQKATHALSRWSEAGVQVLDAGRVVST-GLPATTRTVGIGGVVDLVVLFAHGGDDIAIMSSLNASL-KPRVLVVRYEDYWGSHVKAVRTSLRRGTLSERLEGAQGIGHDYSGASVTSLTEVAARVGYRLVWCLANEPIAILVDCKAGAGDGLETVDPASCIKMRNTGTKWRRDMEAMWDEAQEYDW 350          
BLAST of Ggra4344.t1 vs. uniprot
Match: M2WPT8 (Uncharacterized protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2WPT8_GALSU)

HSP 1 Score: 95.1 bits (235), Expect = 1.890e-18
Identity = 79/289 (27.34%), Postives = 133/289 (46.02%), Query Frame = 0
Query:   58 SRNCRPLSIPYSRI----EFGTAASPLQNVLLYVTSVIGATKKVFIEIDSSR-ASGQMLAGNILTQRGWSGIVM-HERWSAYESCRTHYEQVQKSLSSIEARVEVVDAGPIE-------DIERLNSLLNTAEGAGIVDIM---MIFTGGGRDINILSKMQSSIARPRILALFYQAYWGM-------------MDRSRIGDGVADESGRERLFTGASLPALVRLAAKSRYRLIWCLRTEPIAIFIREEEQHGIRTIPP---NSCMSLSPE---WRRDAEAMWDLAQQYEW 311
            S+    +  P+ +I    ++ T A+   + LLY+ S+IG   +V +E++     S    + + L    WS IV+ +  +S Y      Y+ ++++    E + ++    P         DIE +   L+ A   G +D +   ++F        +   ++ S  +PR+L + YQ Y+G               D SR       E GR  LFTGASL A++R + K  YRL+ CL+ +PIA+FIR  E  G R +P    +SC     +   W RD + +W+ +  Y W
Sbjct:  115 SQQFEKIKFPFLKIFHFSQYSTVAT--DSALLYIFSIIGTKNRVAVELEGGHFQSAYHASAHFLLYPLWSQIVVIYSSFSGYTEGAKFYQTLEQTYKR-EKKHDLHQQYPTVTLIYKHLDIENVEQALSNARVIGEIDYLCSLVLFI-------LFIFIRISTVKPRVLVVTYQEYFGPDIVAVRSYQPNDEQDGSRFYHCGKKEQGRNNLFTGASLAAVIRASRKKGYRLVGCLQKDPIALFIRNGE--GERFLPEATADSCFRDKLQDNVWLRDQQILWEESHSYSW 391          
BLAST of Ggra4344.t1 vs. uniprot
Match: A0A7S2ZFK1 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZFK1_9RHOD)

HSP 1 Score: 90.9 bits (224), Expect = 4.580e-18
Identity = 65/207 (31.40%), Postives = 99/207 (47.83%), Query Frame = 0
Query:  121 WSGIVMHERWSAY----ESCRTHYEQVQKSLS-SIEARVEVVDAGPIEDIERLNSLLNTAEGAGIVDIMMIFTGGGRDINILSKMQSSIARPRILALFYQAYWGMMDRS-RIGDGV------ADESGRERLFTGASLPALVRLAAKSRYRLIWCLRTEPIAIFIREEEQHGI-RTIPPNSCM---SLSPEWRRDAEAMWDLAQQYEW 311
            W   +  + WS Y    E         +++ S S   +V V + G        N +L  +  AG +D++ +FT    D  I  ++      PR++ + YQ YWG  +   R   G       + ++ R RLF GASLPAL +LA   RYRL++CL   PIA F+ ++    I +T+P   C    ++  EW +D  A WD AQ +EW
Sbjct:   12 WDVYMYFQTWSGYAIGNELLNNAASASRRAQSFSTPPKVNVSEVGTA--FSNFNKVLKGSLVAGEIDLLCLFTETD-DYEIWKRIDG--VAPRVVLVTYQEYWGPDEAVIRASSGKPRPRQDSRDTKRRRLFVGASLPALNKLANSKRYRLVYCLSNTPIAAFVLDDPTTQILKTLPMAHCFRKKAVDAEWMKDMAAQWDEAQAFEW 213          
BLAST of Ggra4344.t1 vs. uniprot
Match: A0A1F6PTR6 (Uncharacterized protein n=1 Tax=Candidatus Margulisbacteria bacterium GWD2_39_127 TaxID=1817871 RepID=A0A1F6PTR6_9BACT)

HSP 1 Score: 68.9 bits (167), Expect = 1.120e-9
Identity = 67/252 (26.59%), Postives = 111/252 (44.05%), Query Frame = 0
Query:   32 SLSYAEDLHLLQSDSSQYLRIAWLPESRNCRPLSIPYSRIEFGT-AASPLQNVLLYVTSVIGATKKVFIEIDSSRASGQMLAGNILTQRGWSGIVMHERWSAYESCRTHYEQVQKSLSSIEARV-EVVDAGPIEDIERLNSLLNTAEGAGIVDIMMIFTGGGRDINILSKMQSSIARPRILALFYQAYWGMMDRSRI----GDGVADESGRERL--FTGASLPALVRLAAKSRYRLIWCLRTEPIAIFIREE 275
            S+   E  H L    SQ L +    E  N +     +  I F   + +    +LLY+ S+IG T K  I+I S+   G   A N++   GWS +++             Y       S  E ++   +      ++  +N+++      G VD+  +   G  D  + + ++  +  PR++ + +QA WG  DRS       D   +  G  +L  ++GASLPA V+LA +  YRL+ C R    A FIR +
Sbjct:   24 SIQKNELQHALSRKESQILLMLKYKELVNNKQTLPAFGDIGFRVFSGADEDGILLYIFSLIGVTSKKLIDIGSAGIDGSNTA-NLILNHGWSALLVESNAKTVNYMNKFYS------SCTETKLYPPILVNEFVNVHNINAIIAKNHFDGEVDLFCLDIDG-IDYWVWNALE--VVNPRVVLVEFQAIWGA-DRSVTIPYKEDFQIEYYGELQLGLYSGASLPAFVKLAKQKGYRLVGCHRYGFNAFFIRND 264          
The following BLAST results are available for this feature:
BLAST of Ggra4344.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2V3IBH51.540e-12659.72Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QJ783.110e-4031.66Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
M2WPT81.890e-1827.34Uncharacterized protein n=1 Tax=Galdieria sulphura... [more]
A0A7S2ZFK14.580e-1831.40Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A1F6PTR61.120e-926.59Uncharacterized protein n=1 Tax=Candidatus Marguli... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000898_piloncontigtig00000898_pilon:10827..11765 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra4344.t1Ggra4344.t1Gracilaria gracilis GNS1m malemRNAtig00000898_pilon 10827..11765 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra4344.t1 ID=Ggra4344.t1|Name=Ggra4344.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=313bp
MVLVVLSILEIIDLPTNVCTARKEAHQKLISSLSYAEDLHLLQSDSSQYL
RIAWLPESRNCRPLSIPYSRIEFGTAASPLQNVLLYVTSVIGATKKVFIE
IDSSRASGQMLAGNILTQRGWSGIVMHERWSAYESCRTHYEQVQKSLSSI
EARVEVVDAGPIEDIERLNSLLNTAEGAGIVDIMMIFTGGGRDINILSKM
QSSIARPRILALFYQAYWGMMDRSRIGDGVADESGRERLFTGASLPALVR
LAAKSRYRLIWCLRTEPIAIFIREEEQHGIRTIPPNSCMSLSPEWRRDAE
AMWDLAQQYEWT*
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