Ggra4296.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra4296.t1
Unique NameGgra4296.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length264
Homology
BLAST of Ggra4296.t1 vs. uniprot
Match: A0A2V3IIR1 (Trehalose-phosphate phosphatase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IIR1_9FLOR)

HSP 1 Score: 216 bits (551), Expect = 1.290e-66
Identity = 116/233 (49.79%), Postives = 148/233 (63.52%), Query Frame = 0
Query:   27 RSLALLFDVDKTTCDTRQFQGGTPKIRAGIQTACQTLYAGGHAIAFISGRTEHRLRNATGDSFPLAARHGRTLVLSSREVVRLGPPVDLSAEIRAAEAFAHSL-NVTCWNDGDTVEIGFQGRECLKPVVEIFMRHLVQRRPQELQLLPLKKVTEIIPCGVGKGVALDYFMDNDPRFSDSFVMYFGDDLNDIPAGRAAQRRGGLLVWVGDVAAAVDAAADYYVADPAAVEHLLV 258
            R  A LFDVDKTT DT+Q QGGT ++R GI +AC  L   GH + FISGR EHRL  AT   FP+ +RHGR L+ S    + +GP V++  E   A AF  S  ++  + D ++ EIGFQ  E +K  V  FM  +V+ RP +L LLPLK V E++     KG A+  F+ +DP F     +YFGDD+ D PAGRA Q  GG+LVWVGD+ +A DA AD YV +PAAVE LLV
Sbjct:   25 RRFAFLFDVDKTTADTQQLQGGTVRVRGGIISACHLLVGKGHGVGFISGRVEHRLLAATAGFFPIGSRHGRDLIFSDGSRMHVGPIVNVEREKEIARAFVASRRDLIYFEDKESFEIGFQNAEHVKGQVNAFMESVVRDRP-DLTLLPLKMVYEVVGKDANKGEAVKAFLRHDPMFRGKLPVYFGDDVGDYPAGRAVQEMGGILVWVGDLRSATDAQADVYVLNPAAVERLLV 256          
BLAST of Ggra4296.t1 vs. uniprot
Match: A0A840I5Q6 (Trehalose 6-phosphate phosphatase n=1 Tax=Parvularcula dongshanensis TaxID=1173995 RepID=A0A840I5Q6_9PROT)

HSP 1 Score: 62.8 bits (151), Expect = 5.200e-8
Identity = 63/199 (31.66%), Postives = 87/199 (43.72%), Query Frame = 0
Query:   67 GHAIAFISGRTEHRLRNATGDSFPLAARHGRTLVLSSREVVRLGP--PVDLSAEIRAAEAFAHS-LNVTCWNDGDTVEIGFQGRECLKPVVEIFMRHLVQRRPQELQLLPLKKVTEIIPCGVGKGVALDYFMDNDPRFSDSFVMYFGDDLNDIPAGRAAQRRGGLLVWVGDVAAAVDAAADYYVADPAAVEHLLVQLCN 262
            G A+A ISGR    L      S   A  HG  ++          P  P DL   +RAAEA AH+   V        + I  +     +P V   +R L  +  +  +L   K+V E+ P G+ KGVA++  M++ P F+    ++FGDD  D       QR GG  V VGD     D  A Y + DP  V   L +  N
Sbjct:   57 GGALALISGRDGRDLSRRVPTSLWRAGNHGNMVLAPGVSEPGTLPEAPADL---LRAAEAIAHANRGVFVEEKAAVLAIHTRANPEAEPAVLDALRGLAAKT-EGYKLQHGKRVIELKPVGMDKGVAIERLMEDAP-FAGRRPVFFGDDATDEDGFAVVQRLGGEAVKVGDG----DTIARYRLDDPDDVWAFLKEALN 246          
BLAST of Ggra4296.t1 vs. uniprot
Match: A0A6S6XYQ2 (Trehalose 6-phosphate phosphatase n=2 Tax=Denitratisoma oestradiolicum TaxID=311182 RepID=A0A6S6XYQ2_9PROT)

HSP 1 Score: 60.1 bits (144), Expect = 4.180e-7
Identity = 52/170 (30.59%), Postives = 75/170 (44.12%), Query Frame = 0
Query:   67 GHAIAFISGRTEHRLRNATGD-SFPLAARHGRTLVLSSREVVRLGPPVDLSAEIRAAEA--FAHSLNVTCWNDGDTVEIGFQGRECLKPVVEIFMRHLVQRRPQELQLLPLKKVTEIIPCGVGKGVALDYFMDNDPRFSDSFVMYFGDDLNDIPAGRAAQRRGGLLVWVG 233
            G A+A ISGR    L    G    P A +HG     ++  + R   P  +   +  A A   A    +   + G T+ I ++    L   V  F+  LV    Q LQL   K+V E+ P GV KG+A+  ++   P F     ++ GDD+ D  A      RGG+ V VG
Sbjct:   41 GGALALISGRAVADLDRHIGILQVPRAGQHGLERRDAAGRLWRHETPEPVKRALLEALAPLLARHGGLLLEDKGSTLAIHYRRAPMLGAYVHRFLGRLVSDIGQGLQLQAGKRVVEVKPAGVDKGMAVAEYLTEAP-FLGRLPVFIGDDITDETAFALVNERGGISVKVG 209          
BLAST of Ggra4296.t1 vs. uniprot
Match: A0A178MSV3 (Trehalose 6-phosphate phosphatase n=2 Tax=Magnetospirillum marisnigri TaxID=1285242 RepID=A0A178MSV3_9PROT)

HSP 1 Score: 60.1 bits (144), Expect = 4.730e-7
Identity = 64/235 (27.23%), Postives = 95/235 (40.43%), Query Frame = 0
Query:   26 HRSLALLFDVDKTTCDTRQFQGGT--PKIRAGIQTACQTLYAGGHAIAFISGRTEHRLRNATGDSFPLAARHGRTLVLSSREVVRLGP-PVDLSAEIRAAEAFAHSLNVTCWNDGDTVEIGFQGRECLKPVVEIFMRHLVQRRPQELQLLPLKKVTEIIPCGVGKGVALDYFMDNDPRFSDSFVMYFGDDLNDIPAGRAAQRRGGLLVWVGDVAAAVDAAADYYVADPAAVEHLL 257
            H + AL  D+D T  D     G    PK    +  A    + G  A+A +SGR+   + +    +      HG    L  +  +   P P  L A I AA        V       ++ + F+     +  V       V   P+   LL  K V EIIP GVGKG A++ FM   P ++    ++ GDD+ D     A  R  GL + VG+   +    A +   DP ++ H L
Sbjct:   12 HAAWALFLDIDGTLLDLASTPGDVVVPKDLLTLLDALTRRFGG--ALALVSGRSLDSIDSLFPGNRDAVGCHGAEWRLGGQTFIPQPPWPDGLLAGIEAARR--RLPGVMLERKSVSLALHFRAAPEQEAAVWDVAEAAVATDPRRFDLLEGKSVIEIIPAGVGKGSAIERFMQVRP-YAGRRPVFAGDDVTDESGFAAVNRMYGLSIHVGN---SPTTKAQFRFPDPESLRHWL 238          
BLAST of Ggra4296.t1 vs. uniprot
Match: A0A6S6QSR4 (Trehalose 6-phosphate phosphatase n=1 Tax=Terrihabitans soli TaxID=708113 RepID=A0A6S6QSR4_9HYPH)

HSP 1 Score: 60.1 bits (144), Expect = 5.070e-7
Identity = 62/221 (28.05%), Postives = 92/221 (41.63%), Query Frame = 0
Query:   22 LAARHRSLALLFDVDKTTCDTRQFQGGT---PKIRAGIQTACQTLYAGGHAIAFISGRTEHRLRNATGD-SFPLAARHGRTLVLSSREVVRLGPPVD-----LSAEIRAAEAFAHSLNVTCWNDGDTVEIGFQGRECLKPVVEIFMRHLVQRRPQELQLLPLKKVTEIIPCGVGKGVALDYFMDNDPRFSDSFVMYFGDDLNDIPAGRAAQRRGGLLVWVG 233
            L A    LAL  DVD T  D           PK+   ++     L   G A+A ++GR    +         P+A  HG  L  +   +   G P+      ++ E++   A    L V     G  V I ++    L   VE F+R +V R    L++ P K V E+ P  + KG A+  F++ +P    +  +  GDD  D P  R A  RGG  + VG
Sbjct:   21 LPAELSDLALFLDVDGTLIDIAPSPDLVVIPPKLIPLLERLSLKL---GGALALVTGREIGVVDTMFAPLKLPVAGVHGAELRFADGTLK--GTPIHPELARITEELKTFAAENEGLLVE--PKGRAVAIHYRLNPALGEDVEAFVREVVDRGTDGLEIQPGKMVVEVRPAKIDKGRAIGVFLETEPYVGRT-PLVIGDDWTDEPGFRTANARGGRSIRVG 233          
The following BLAST results are available for this feature:
BLAST of Ggra4296.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2V3IIR11.290e-6649.79Trehalose-phosphate phosphatase n=1 Tax=Gracilario... [more]
A0A840I5Q65.200e-831.66Trehalose 6-phosphate phosphatase n=1 Tax=Parvular... [more]
A0A6S6XYQ24.180e-730.59Trehalose 6-phosphate phosphatase n=2 Tax=Denitrat... [more]
A0A178MSV34.730e-727.23Trehalose 6-phosphate phosphatase n=2 Tax=Magnetos... [more]
A0A6S6QSR45.070e-728.05Trehalose 6-phosphate phosphatase n=1 Tax=Terrihab... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023214HAD superfamilyGENE3D3.40.50.1000coord: 147..263
e-value: 6.1E-12
score: 47.7
IPR036412HAD-like superfamilySUPERFAMILY56784HAD-likecoord: 31..261

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000022_piloncontigtig00000022_pilon:261729..262520 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra4296.t1Ggra4296.t1Gracilaria gracilis GNS1m malemRNAtig00000022_pilon 261729..262520 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra4296.t1 ID=Ggra4296.t1|Name=Ggra4296.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=264bp
MASITAARPPPKPAPPTLLRTLAARHRSLALLFDVDKTTCDTRQFQGGTP
KIRAGIQTACQTLYAGGHAIAFISGRTEHRLRNATGDSFPLAARHGRTLV
LSSREVVRLGPPVDLSAEIRAAEAFAHSLNVTCWNDGDTVEIGFQGRECL
KPVVEIFMRHLVQRRPQELQLLPLKKVTEIIPCGVGKGVALDYFMDNDPR
FSDSFVMYFGDDLNDIPAGRAAQRRGGLLVWVGDVAAAVDAAADYYVADP
AAVEHLLVQLCND*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023214HAD_sf
IPR036412HAD-like_sf