Ggra4261.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra4261.t1
Unique NameGgra4261.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length298
Homology
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BLAST of Ggra4261.t1 vs. uniprot
Match: A0A7S0ZHB6 (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZHB6_9RHOD)

HSP 1 Score: 78.6 bits (192), Expect = 1.140e-13
Identity = 36/81 (44.44%), Postives = 47/81 (58.02%), Query Frame = 0 
Query:  176 VPKSSRYCHLCARHQRSVGMVACGNVALGLCQKSVCIKCIA----TYALNVRLPNWSCPHCCNNCPRRAKCFSYDRQTARR 252
            V   SRYCHLC R    + +  C N + G C+K+VC  CI     +  +  +LPNW+CPHC N CP RA+C SY+    RR
Sbjct:  119 VRSHSRYCHLCGRSSGHITLKVCDNFSQGTCRKAVCTDCIDNKLDSAQIQSKLPNWTCPHCQNMCPERARCHSYNASNKRR 199
The following BLAST results are available for this feature:
BLAST of Ggra4261.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A7S0ZHB61.140e-1344.44Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 268..283
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 254..283
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 75..110
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 74..110

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000880_piloncontigtig00000880_pilon:469834..470727 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra4261.t1Ggra4261.t1Gracilaria gracilis GNS1m malemRNAtig00000880_pilon 469834..470727 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra4261.t1 ID=Ggra4261.t1|Name=Ggra4261.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=298bp
MDNALPLPPFVPADLSSCVPISAMLNAAMVEPPCGAAAAAVTPSAPCELP
EPPSPRWPDLDLLELIIPSASSACSSPAWPPPPPPPPPQQQQQHVPLPPP
APPTPPSPAPPLALPALCGAALPALPSLARAGALAWSPVSERGASASARS
RSPAGATTATAAAASRIHKQTRRYTVPKSSRYCHLCARHQRSVGMVACGN
VALGLCQKSVCIKCIATYALNVRLPNWSCPHCCNNCPRRAKCFSYDRQTA
RRRERSLRAKLSAGAPVSQQPALPQPQQPKVQLQQERSTLSTNYKCV*
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