Ggra4226.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra4226.t1
Unique NameGgra4226.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length440
Homology
BLAST of Ggra4226.t1 vs. uniprot
Match: A0A2V3IT31 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IT31_9FLOR)

HSP 1 Score: 217 bits (553), Expect = 7.600e-62
Identity = 172/465 (36.99%), Postives = 252/465 (54.19%), Query Frame = 0
Query:    2 SPSEAMPQHEQPLVTVKDYRPSCHSSSSSDAPDSTDDEFDFEVEK-PCPFAHLPKKSRLGRLYITRFANGFWSERPIVTTVETPLKLRCWAINGPDDFYDEQLEREPFSRDDDTIVPMTAMGFLASHRELLRQPPSPKPSVGKISPLQKCYIKIVRP-SPVKHRVATPRAKASLEHD----VDDMLSTKGRLVEEPCGLSDSSSDSKSQLNFTFNPYTNSSN--STSINFCLRSEEDTSSGESHHQIDDAYEAPLLSVST-------------GSNLKPPKEQVQT----LTHRVEQLMSLANSLQGRITACNREKIQLQQQVQVLQAVQSCSEDSTSPRSSASEPSAETKPKRPSSKTKCVAREEERLRMELLQEKQKTAEVQVENERLLAVILKLKREMDIEHDLHESI------KNKAVPEQSGGKWQRIRQLVRSSSGLWDPKELKKRSTLQRGWSFARSK 435
            SP    P+ +QPL++V DYRPS +  +S    D  DDE     +  P PFA+LP ++  G  + TR++ G W+E+P +T + +P  LR W INGPD+  D+  E++    DD+ +V    +  L +  E+L Q P P  SVGK+SPLQK  I +  P  P  H V       SL       V  M++T GR V +P  LS+SS  +      T +PY   S+  S+ INF L      SS + HH   D  ++ + S+               G  L  P  Q Q     LT RVEQL++L   LQ +++ C ++K  ++QQ+   +A ++ S  S  PR+S S PS E  P+R S K +  ARE++R+RMEL++EKQ+TAE+Q ENERLL VILKLKRE+D EH+ + ++         +V ++   K + + Q  RS+S     K+ KK+   +R W F R+K
Sbjct:   32 SPDPPTPE-QQPLLSVTDYRPSANYVTS----DEEDDEHHPPAQPAPNPFANLPCETVYGAPHSTRYSKGIWTEKPRITHLHSPQPLRLWTINGPDESRDDDEEQQIVYMDDNVLVYTKNIQMLRAQWEILNQRPGPPASVGKLSPLQKFQISVAHPVKPFNHAVIPLGNPLSLSRSCVVSVSGMINTHGRTVPDPPALSESSHSTHQ----TDSPYEQLSDEHSSVINFRL-----DSSSDDHHSESDLSDSNIPSLPAKAPAPTSPAHRDLGGPLHVPSPQAQAQIDNLTARVEQLLALNTHLQQQLSDCRKDKANVEQQLSAAKATEN-SNQSAPPRTSDS-PSEERSPRRASMKKRRNAREDDRIRMELMEEKQRTAEMQSENERLLGVILKLKRELDGEHERNMALYETRFGAEPSVLDKGKQKAKSLLQRSRSAS-----KDAKKKVEQRRRWIFGRTK 475          
The following BLAST results are available for this feature:
BLAST of Ggra4226.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IT317.600e-6236.99Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 340..360
NoneNo IPR availableCOILSCoilCoilcoord: 278..298
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 226..260
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 310..336
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..41
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 310..326

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000880_piloncontigtig00000880_pilon:299114..300433 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra4226.t1Ggra4226.t1Gracilaria gracilis GNS1m malemRNAtig00000880_pilon 299114..300433 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra4226.t1 ID=Ggra4226.t1|Name=Ggra4226.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=440bp
MSPSEAMPQHEQPLVTVKDYRPSCHSSSSSDAPDSTDDEFDFEVEKPCPF
AHLPKKSRLGRLYITRFANGFWSERPIVTTVETPLKLRCWAINGPDDFYD
EQLEREPFSRDDDTIVPMTAMGFLASHRELLRQPPSPKPSVGKISPLQKC
YIKIVRPSPVKHRVATPRAKASLEHDVDDMLSTKGRLVEEPCGLSDSSSD
SKSQLNFTFNPYTNSSNSTSINFCLRSEEDTSSGESHHQIDDAYEAPLLS
VSTGSNLKPPKEQVQTLTHRVEQLMSLANSLQGRITACNREKIQLQQQVQ
VLQAVQSCSEDSTSPRSSASEPSAETKPKRPSSKTKCVAREEERLRMELL
QEKQKTAEVQVENERLLAVILKLKREMDIEHDLHESIKNKAVPEQSGGKW
QRIRQLVRSSSGLWDPKELKKRSTLQRGWSFARSKSRKR*
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