Ggra4199.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra4199.t1
Unique NameGgra4199.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length245
Homology
BLAST of Ggra4199.t1 vs. uniprot
Match: A0A2V3J0N8 (Beta-glucanase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0N8_9FLOR)

HSP 1 Score: 333 bits (855), Expect = 2.030e-112
Identity = 147/235 (62.55%), Postives = 176/235 (74.89%), Query Frame = 0
Query:   10 EAPFVDTFKFLKHSRWKVSDGYANGVPFNCWWSKTATAIDENNGQLKLTISKQHNHGKPYKSGQLMSKDWYGYGCYEVRMRPVAQPGVITTFFSYTGPWDAAPGKSKAHNEVDIEFVWKE--GKLSLQANYFKNGQGGNEHKIPINFNPAESMNNYGFKWTSNSITWFVNGKKMYETSKNIPKVHEAPHKIMMSLWPVSWEGAQWGGTFVYKGHRTAAYDGVRFTKGQNCKIMNW 242
            +  F D F  L   RW  SD YANG PFN WWS    ++D    QLKLT+++ H+HGKP+KSGQ+ S +W+GYGCYEVRMRPVAQ GVI+TFF+YTGPWDAAPGKS AHNE+DIEFV K   GKL LQ NYF NGQGGNEH + + F+P+ SM+NYGF+WT ++I W+VNG+ ++    NIPKVH AP +I +SLWPVSW+ A WGG F Y GHRTAAYD VRFTKG NC    W
Sbjct:   67 QCTFFDHFNTLNTWRWTKSDNYANGDPFNAWWSADQVSVDAKRNQLKLTLAQHHHHGKPFKSGQIKSNNWHGYGCYEVRMRPVAQTGVISTFFAYTGPWDAAPGKSGAHNEIDIEFVRKSASGKLMLQTNYFTNGQGGNEHDVHLPFDPSSSMHNYGFRWTQHAIQWYVNGQLVHTAKNNIPKVHVAPLRIFLSLWPVSWKAAAWGGHFAYAGHRTAAYDWVRFTKGSNCNSKWW 301          
BLAST of Ggra4199.t1 vs. uniprot
Match: glycoside hydrolase family 16 protein n=1 Tax=Thiocapsa imhoffii TaxID=382777 RepID=UPI0019054C6D (glycoside hydrolase family 16 protein n=1 Tax=Thiocapsa imhoffii TaxID=382777 RepID=UPI0019054C6D)

HSP 1 Score: 180 bits (457), Expect = 3.350e-51
Identity = 91/240 (37.92%), Postives = 139/240 (57.92%), Query Frame = 0
Query:   11 APFVDTFKFLKHSRWKVSDGYANGVPF-NCWWSKTATAIDENNGQLKLTISKQHNHGKPYKSGQLMSKDWYGYGCYEVRMRPVAQPGVITTFFSYTGPWDAAPGKSKAHNEVDIEFVWKEGKLSLQANYFKNGQ---GGNEHKIPINFNPAESMNNYGFKWTSNSITWFVNGKKMYETSKN----IPKVHEAPHKIMMSLWPVSWEGAQWGGTFVYKGHR-TAAYDGVRFTKGQNCKIMN 241
            + F D       SRW  +DG+ NG PF N W   TA  +  +NG++ LT+    N G  Y SG+  +  +YGYGCYEV M+PV+ PGV+++FF++ GP+D   G +  HNE+DIEF+ KE  + +Q N++ N       N +  P+ F+ + + + YGFKWTS  I WFV+G  +Y    +     PK  ++  +IM ++WPV    + W G F+Y+G   TA Y+  RF +G+ C + +
Sbjct:   49 SSFTDDLSHHDTSRWSKADGWTNGTPFANAW---TAEHVTFSNGKMVLTLDASSNQGMDYSSGEYRTMGFYGYGCYEVSMKPVSHPGVVSSFFTFAGPYDN--GGNGQHNEIDIEFLGKETSI-VQFNFWTNDDDYISDNSYLYPLGFDASHNFHRYGFKWTSWGIEWFVDGVPVYAVWDHPLIPTPKTSDSLQRIMANVWPVDATASDWAGEFLYQGDPLTADYEWTRFIQGEACDLSD 282          
BLAST of Ggra4199.t1 vs. uniprot
Match: glycoside hydrolase family 16 protein n=1 Tax=Clostridium sp. C2-6-12 TaxID=2698832 RepID=UPI00136D9D8D (glycoside hydrolase family 16 protein n=1 Tax=Clostridium sp. C2-6-12 TaxID=2698832 RepID=UPI00136D9D8D)

HSP 1 Score: 175 bits (444), Expect = 5.420e-51
Identity = 93/225 (41.33%), Postives = 130/225 (57.78%), Query Frame = 0
Query:    8 LREAPFVDTFKFLKHSRWKVSDGYANGVPFNCWWSKTATAIDENNGQLKLTISKQHNHG-KPYKSGQLMSKDWYGYGCYEVRMRPVAQPGVITTFFSYTGPWDAAPGKSKAHNEVDIEFVWKEGKLSLQANYFKNGQGGNEHKIPINFNPAESMNNYGFKWTSNSITWFVNGKKMYETSKNIPKVHEAPHKIMMSLWPV----SWEGAQWGGTFVYKGHRTAAYD 227
            L +  F D F +     W  SDG+ NG  FNC W   A+ ++ +NG + LT++K    G KPY  G+  SKD YGYG Y+VRM+P    G++++FF+YTGP D  P      +E+DIEF+ K+    +Q NY+ NG G +E+   + F+ + S + Y F W S  I W V+GK++Y  +KNIP     P KIMM+LWP     SW GA  G T +   +  AAYD
Sbjct:   31 LTKTHFSDGFDYANTKAWTKSDGWTNGGMFNCTWR--ASNVNFSNGVMDLTLNKDKQGGSKPYAGGEYRSKDTYGYGLYQVRMKPAKNTGIVSSFFTYTGPTDGTPW-----DEIDIEFLGKD-TTKVQFNYYTNGVGNHEYLYNLGFDASSSFHTYAFNWQSTYIAWLVDGKEVYRATKNIPS---HPGKIMMNLWPGTGVDSWLGAYNGATPINAYYDWAAYD 244          
BLAST of Ggra4199.t1 vs. uniprot
Match: Q45648 (Beta-glucanase n=2 Tax=Bacillaceae TaxID=186817 RepID=Q45648_BACSP)

HSP 1 Score: 170 bits (430), Expect = 1.610e-48
Identity = 91/226 (40.27%), Postives = 132/226 (58.41%), Query Frame = 0
Query:   13 FVDTFKFLKHSRWKVSDGYANGVPFNCWWSKTATAIDENNGQLKLTISKQHNH--GKPYKSGQLMSKDWYGYGCYEVRMRPVAQPGVITTFFSYTGPWDAAPGKSKAHNEVDIEFVWKEGKLSLQANYFKNGQGGNEHKIPINFNPAESMNNYGFKWTSNSITWFVNGKKMYETSKNIPKVHEAPHKIMMSLWP-VSWEGAQWGGTFVYKGHRTAA---YDGVRFT 232
            FV+TF+     RW  +  ++NG  FN  W         +NG++KL I K+ N     PYK+G+L + D+Y YG +EV M+P    G +++FF+YTGPWD    ++   +E+DIEF+ K+    +Q NYF NG GGNEH   + F+ A+  N Y F+W   SI WFVNG+ ++  ++NIP   + P KIMM+LWP +  +G  W G F   G  T     YD V++T
Sbjct:   40 FVETFESYDSERWSKAGVWSNGQMFNATWYPEQVTF--SNGKMKLQIEKEDNETASPPYKAGELRTNDFYHYGLFEVSMKPAKSTGTVSSFFTYTGPWD---WENDPWDEIDIEFLGKD-TTKIQFNYFTNGVGGNEHYHELGFDAADDFNTYAFEWRPESIRWFVNGELVHTATENIP---QTPQKIMMNLWPGIGVDG--WTGRF--NGEDTPVVTQYDWVKYT 252          
BLAST of Ggra4199.t1 vs. uniprot
Match: glycoside hydrolase family 16 protein n=1 Tax=Rhodomicrobium TaxID=1068 RepID=UPI000B4B38F5 (glycoside hydrolase family 16 protein n=1 Tax=Rhodomicrobium TaxID=1068 RepID=UPI000B4B38F5)

HSP 1 Score: 168 bits (426), Expect = 7.170e-48
Identity = 93/237 (39.24%), Postives = 138/237 (58.23%), Query Frame = 0
Query:   11 APFVDTFKFLKHSRWKVSDGYANGVPFNCWWSKTATAIDENNGQLKLTISKQH----NHGKPYKSGQLMSKDWYGYGCYEVRMRPVAQPGVITTFFSYTGPWDAAPGKSKAHNEVDIEFVWKEGKLSLQANYFKNGQGGNEHKIPINFNPAESMNNYGFKWTSNSITWFVNGKKMYETSKNI-PKVHEAPHKIMMSLWP-VSWEGAQWGGTFVYKGHRTAA-YDGVRFTK-GQNCKI 239
            A FVD F  +  +RW  SDG+ANG   NC WSK    I +  G L+L +  +       G+PY   ++ + D YGYG YEVRMRP A  G+++ FF+Y GP   AP     H+E+DIEF+ K+ + ++Q NYF   +GG+E+  P+ F+ +++M +Y F+W  ++I W++NG+ M+E  +         P KIM+S+W  V  +G  W G F Y G    A YD + FTK G+ C+ 
Sbjct:   37 ASFVDEFDRIDPARWYKSDGWANGTHQNCTWSKKNVHIVD--GTLELVLEPEDAGAATEGRPYSCAEMQTHDSYGYGTYEVRMRPAAASGLVSAFFTYIGPRPDAPNP---HDEIDIEFLGKD-RHAVQLNYFGEAKGGHEYMAPLPFDASQTMADYAFEWAPDAIRWYLNGELMHEEKRQEGTPFPNTPGKIMLSIWGGVDLDG--WLGKFDYPGQPLIARYDRIAFTKAGEKCQF 265          
BLAST of Ggra4199.t1 vs. uniprot
Match: A0A2T3NH35 (GH16 domain-containing protein n=3 Tax=Photobacterium rosenbergii TaxID=294936 RepID=A0A2T3NH35_9GAMM)

HSP 1 Score: 170 bits (431), Expect = 2.790e-47
Identity = 90/242 (37.19%), Postives = 136/242 (56.20%), Query Frame = 0
Query:    7 ELREAP-FVDTFKFLKHSRWKVSDGYANGVPFNCWWSKTATAIDENNGQLKLTISKQHNHGKPYKSGQLMSKDWYGYGCYEVRMRPVAQPGVITTFFSYTGPWDAAPGKSKAHNEVDIEFVWKEGKLSLQANYFKNGQ---GGNEHKIPINFNPAESMNNYGFKWTSNSITWFVNGKKMYE---TSKN-IPKVHEAPHKIMMSLWPVSWEGAQWGGTFVYKGHRTAA-YDGVRFTKGQNCKI 239
            E+  AP F D         W+ +DG+ANG PF   WS  + A+D ++  L + +S     G  Y SG+L + ++YGYGCYEV MRP A  GV++ FF++ GP+D   G +  HNE+DIEF+  +  + +Q N++ N      G+E  I + F+ ++S N+Y F W+   I W++N + +Y    TS +  PKV +  HKIMM++WPV    + W G F Y        +  VRFT+G +C  
Sbjct:   51 EITSAPSFSDALTSFDTGHWQAADGWANGSPFLNAWS--SAALDFSSDGLGIVLSDAPLLGYDYTSGELRTSNFYGYGCYEVEMRPAAVSGVVSAFFTFMGPYDNVRGGNGQHNEIDIEFLGNDTNV-VQFNFWTNDDQYANGHEKIIELGFDASKSFNHYAFDWSETGINWYINKQLVYSVISTSNDPTPKVSDGTHKIMMNMWPVDASASGWAGEFTYPMIPVLGEFKNVRFTEGSDCNF 289          
BLAST of Ggra4199.t1 vs. uniprot
Match: A0A8D6R0A9 (Beta-glucanase n=4 Tax=Clostridium TaxID=1485 RepID=A0A8D6R0A9_9CLOT)

HSP 1 Score: 166 bits (419), Expect = 3.100e-47
Identity = 86/225 (38.22%), Postives = 126/225 (56.00%), Query Frame = 0
Query:    8 LREAPFVDTFKFLKHSRWKVSDGYANGVPFNCWWSKTATAIDENNGQLKLTISKQHNHG-KPYKSGQLMSKDWYGYGCYEVRMRPVAQPGVITTFFSYTGPWDAAPGKSKAHNEVDIEFVWKEGKLSLQANYFKNGQGGNEHKIPINFNPAESMNNYGFKWTSNSITWFVNGKKMYETSKNIPKVHEAPHKIMMSLWPV----SWEGAQWGGTFVYKGHRTAAYD 227
            L +    + F +   S W  SDG+ NG  FNC W   ++ ++ +NG + LT++K    G KPY  G+  S D YGYG Y+V M+P    G++++FF+YTGP D  P      +E+DIEF+ K+    +Q NY+ NG G +EH   + F+ ++S + Y F W    I W V+GK++Y  + NIP     P KIM++LWP     SW  A  G T +Y  +   AYD
Sbjct:   31 LTKTHMGEAFDYANPSAWSKSDGWTNGGMFNCTWR--SSNVNFSNGTMALTLNKDTKGGTKPYAGGEYRSNDTYGYGIYQVNMKPAKNTGIVSSFFTYTGPTDGTPW-----DEIDIEFLGKD-TTKVQFNYYTNGVGNHEHIYNLGFDASKSYHTYAFNWQPTYIAWLVDGKEVYRATNNIPS---HPGKIMLNLWPGTGVDSWLNAYDGKTPIYANYDWVAYD 244          
BLAST of Ggra4199.t1 vs. uniprot
Match: A0A7X9XEU3 (Beta-glucanase n=1 Tax=Clostridium sp. SM-530-WT-3G TaxID=2725303 RepID=A0A7X9XEU3_9CLOT)

HSP 1 Score: 165 bits (417), Expect = 5.360e-47
Identity = 87/221 (39.37%), Postives = 127/221 (57.47%), Query Frame = 0
Query:   13 FVDTFKFLKHSRWKVSDGYANGVPFNCWWSKTATAIDENNGQLKLTISKQHNHGKPYKSGQLMSKDWYGYGCYEVRMRPVAQPGVITTFFSYTGPWDAAPGKSKAHNEVDIEFVWKEGKLSLQANYFKNGQGGNEHKIPINFNPAESMNNYGFKWTSNSITWFVNGKKMYETSKNIPKVHEAPHKIMMSLWPV----SWEGAQWGGTFVYKGHRTAAYDGV 229
            F D FK+   S+W+ SDG++N   FNC W K   +  +N   ++L+I  Q +  KPY  G+  ++D +GYG Y+V M+P   PGV+++FF+YTGP D  P      +E+DIEF+ K+    +Q NY+ NG G +E+   + F+ +ES + Y   W  N I W V+GK++Y T  NIP     P KIM+++WP     SW G   G T V   +   AYD V
Sbjct:   32 FADEFKYFNSSKWEKSDGWSNEGMFNCTWRKNNVSFWDNE-TMQLSIY-QDSGNKPYSGGEYRTRDTFGYGLYQVNMKPAKNPGVVSSFFTYTGPTDGTPW-----DEIDIEFLGKD-TTKVQFNYYTNGVGNHEYVYDLGFDASESYHTYAIDWKPNYIAWRVDGKEVYRTYNNIPS---HPGKIMLNVWPGINVDSWLGKYDGKTPVTASYNWMAYDPV 241          
BLAST of Ggra4199.t1 vs. uniprot
Match: M1MTK6 (Beta-glucanase n=6 Tax=Clostridium TaxID=1485 RepID=M1MTK6_9CLOT)

HSP 1 Score: 164 bits (414), Expect = 1.750e-46
Identity = 88/225 (39.11%), Postives = 127/225 (56.44%), Query Frame = 0
Query:    8 LREAPFVDTFKFLKHSRWKVSDGYANGVPFNCWWSKTATAIDENNGQLKLTISKQHNHG-KPYKSGQLMSKDWYGYGCYEVRMRPVAQPGVITTFFSYTGPWDAAPGKSKAHNEVDIEFVWKEGKLSLQANYFKNGQGGNEHKIPINFNPAESMNNYGFKWTSNSITWFVNGKKMYETSKNIPKVHEAPHKIMMSLWPV----SWEGAQWGGTFVYKGHRTAAYD 227
            L    F + F     + W  SDG++N   FNC W   ++ ++ +NG + LT++K    G KPY  G+  SKD Y YG Y+VRM+P    G++++FF+YTGP D  P      +E+DIEF+ K+    +Q NY+ NG G +E+   + F+ + S + Y F W    I W V+GK++Y  +KNIP     P KIMM+LWP     SW GA  G T +   +  AAYD
Sbjct:   31 LTTTHFGEAFNSYNTTAWTKSDGWSNDAMFNCTWR--SSNVNFSNGVMNLTLNKDTQGGAKPYAGGEYRSKDTYRYGLYQVRMKPAKNTGIVSSFFTYTGPTDGTPW-----DEIDIEFLGKD-TTKVQFNYYTNGVGNHEYLYNLGFDASSSFHTYAFNWQPTYIAWLVDGKEVYRATKNIPS---HPGKIMMNLWPGTGVDSWLGAYNGVTPINAYYDWAAYD 244          
BLAST of Ggra4199.t1 vs. uniprot
Match: A0A385NPH9 (Beta-glucanase n=1 Tax=Bacillus sp. Y1 TaxID=352858 RepID=A0A385NPH9_9BACI)

HSP 1 Score: 164 bits (414), Expect = 4.030e-46
Identity = 90/239 (37.66%), Postives = 137/239 (57.32%), Query Frame = 0
Query:    4 HLPELREAP----FVDTFKFLKHSRWKVSDGYANGVPFNC-WWSKTATAIDENNGQLKLTISKQHNH--GKPYKSGQLMSKDWYGYGCYEVRMRPVAQPGVITTFFSYTGPWDAAPGKSKAHNEVDIEFVWKEGKLSLQANYFKNGQGGNEHKIPINFNPAESMNNYGFKWTSNSITWFVNGKKMYETSKNIPKVHEAPHKIMMSLWPVSWEGAQWGGTFVYKGHRT---AAYDGVRFT 232
            H+ +  E P    F++ F      RW  +  Y+NG  FN  W+ +  T +D   G+++L I K+ N     PYKSG+L + D+Y YG +EV M+P    G +++FF+YTGPWD    ++   +E+DIEF+ K+    +Q NYF NG GG+E    + F+ +E  + Y F+W  +SI WFVNGK ++  ++NIP   + P KIMM+LWP      +W G F   G  T   + Y+ V++T
Sbjct:   27 HVAKAAERPIGPSFIEKFNTFDSERWSKAGIYSNGAMFNATWYPEQVTILD---GKMRLQIDKEDNETASPPYKSGELRTNDFYHYGLFEVNMKPAKSTGTVSSFFTYTGPWD---WENDPWDEIDIEFLGKD-TTKIQFNYFTNGVGGHEQYHELGFDASEDFHTYAFEWRPDSIRWFVNGKLVHTATENIP---QTPQKIMMNLWPGIGVD-EWTGKF--NGEDTPVVSQYNWVKYT 252          
The following BLAST results are available for this feature:
BLAST of Ggra4199.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J0N82.030e-11262.55Beta-glucanase n=1 Tax=Gracilariopsis chorda TaxID... [more]
glycoside hydrolase family 16 protein n=1 Tax=Thiocapsa imhoffii TaxID=382777 RepID=UPI0019054C6D3.350e-5137.92glycoside hydrolase family 16 protein n=1 Tax=Thio... [more]
glycoside hydrolase family 16 protein n=1 Tax=Clostridium sp. C2-6-12 TaxID=2698832 RepID=UPI00136D9D8D5.420e-5141.33glycoside hydrolase family 16 protein n=1 Tax=Clos... [more]
Q456481.610e-4840.27Beta-glucanase n=2 Tax=Bacillaceae TaxID=186817 Re... [more]
glycoside hydrolase family 16 protein n=1 Tax=Rhodomicrobium TaxID=1068 RepID=UPI000B4B38F57.170e-4839.24glycoside hydrolase family 16 protein n=1 Tax=Rhod... [more]
A0A2T3NH352.790e-4737.19GH16 domain-containing protein n=3 Tax=Photobacter... [more]
A0A8D6R0A93.100e-4738.22Beta-glucanase n=4 Tax=Clostridium TaxID=1485 RepI... [more]
A0A7X9XEU35.360e-4739.37Beta-glucanase n=1 Tax=Clostridium sp. SM-530-WT-3... [more]
M1MTK61.750e-4639.11Beta-glucanase n=6 Tax=Clostridium TaxID=1485 RepI... [more]
A0A385NPH94.030e-4637.66Beta-glucanase n=1 Tax=Bacillus sp. Y1 TaxID=35285... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008264Beta-glucanasePRINTSPR00737GLHYDRLASE16coord: 91..107
score: 48.04
coord: 72..90
score: 49.56
coord: 172..189
score: 41.2
NoneNo IPR availableGENE3D2.60.120.200coord: 10..234
e-value: 4.3E-55
score: 188.7
NoneNo IPR availablePANTHERPTHR31062:SF1XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATEDcoord: 39..214
IPR000757Glycoside hydrolase family 16PFAMPF00722Glyco_hydro_16coord: 36..212
e-value: 2.1E-28
score: 99.0
IPR000757Glycoside hydrolase family 16PROSITEPS51762GH16_2coord: 15..237
score: 21.219292
IPR044791Beta-glucanase/XTHPANTHERPTHR31062XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATEDcoord: 39..214
IPR013320Concanavalin A-like lectin/glucanase domain superfamilySUPERFAMILY49899Concanavalin A-like lectins/glucanasescoord: 12..231

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000880_piloncontigtig00000880_pilon:56035..57070 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra4199.t1Ggra4199.t1Gracilaria gracilis GNS1m malemRNAtig00000880_pilon 56035..57070 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra4199.t1 ID=Ggra4199.t1|Name=Ggra4199.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=245bp
MEHHLPELREAPFVDTFKFLKHSRWKVSDGYANGVPFNCWWSKTATAIDE
NNGQLKLTISKQHNHGKPYKSGQLMSKDWYGYGCYEVRMRPVAQPGVITT
FFSYTGPWDAAPGKSKAHNEVDIEFVWKEGKLSLQANYFKNGQGGNEHKI
PINFNPAESMNNYGFKWTSNSITWFVNGKKMYETSKNIPKVHEAPHKIMM
SLWPVSWEGAQWGGTFVYKGHRTAAYDGVRFTKGQNCKIMNWFP*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008264Beta_glucanase
IPR000757GH16
IPR044791Beta-glucanase/XTH
IPR013320ConA-like_dom_sf