Ggra417.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra417.t1
Unique NameGgra417.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length712
Homology
BLAST of Ggra417.t1 vs. uniprot
Match: A0A345U8Z4 (DNA-directed RNA polymerase subunit beta n=1 Tax=Agarophyton vermiculophyllum TaxID=2608709 RepID=A0A345U8Z4_9FLOR)

HSP 1 Score: 1337 bits (3461), Expect = 0.000e+0
Identity = 665/711 (93.53%), Postives = 694/711 (97.61%), Query Frame = 0
Query:    1 MDQTNPLSELTHKRRISALGPGGLNKDRAGFAVRDLHPSHYGRICPIETPEGPNAGLIGSLSIYAKVNRYGFIETPCYKVINGQVLKNNNLYYITADQEDYLRIAPADITLDNNDFIKDNVIAVRYKQEFITANINQVDYIAVSPIQFISAATSLIPFLEHDDANRALMGSNMQRQAVPLLFPEKSIVGTGLEAKIAKDSGMIITSRTNGIVSYVSGTKVGIQNKEGYTIHYRLKKYYRSNQDTCINQRPIVWPGENICVGQTIADGASTDGGEIALGRNIIVAYMPWEGYNYEDAFLISERLVYDDLYTSIHIERYELECRQTKLGSEEITRDIPNVSESSVSLLDKNGVIAIGSWVDSGDILVGKVTPKGESDQLPEGKLLRAIFGEKARDVRDTSLRLPNATKGRVVNIKIFKRQKGDELPPGTNEIIRVYVAQKRKIQVGDKMAGRHGNKGIISRILAVQDMPFLPDGTPVDIILNPLGVPSRMNVGQLFECLLGLAGSYLGKRFKIIPFDEMYGSEASRALVNNKLQQASLITNQSWLFNSLHPGKVMLIDGRTGEFFDNPVTVGKAYILKLVHLVDDKIHARSTGPYSLVTQQPLGGRAQHGGQRLGEMEVWALEAFGAAYTLQELLTVKSDDMQGRNDALNSIVKGKPIPKPGTPESFKVLMRELQSLALDIAVHKIESLDDGHKTSIEVDLMSDEQVEQMSSI 711
            MDQTNPLSELTHKRRISALGPGGLNKDRAGFAVRDLHPSHYGRICPIETPEGPNAGLIGSLSIYAKVNRYGFIETPCYKVI+GQVLK +  YYITADQEDYLRIAPADITLD N+ I++NVIAVRYKQEFITA+I QVDY+AVSPIQFISAATSLIPFLEHDDANRALMGSNMQRQAVPLLFPEKSIVGTGLEAKIAKDSGM I SRTNGIVSYVSGTK+GIQNKEGYTIHYRLKKYYRSNQDTCINQRPIVWPGENI VGQTIADGASTDGGEIALGRNIIVAYMPW+GYNYEDAFLISERLVY+DLYTSIHIERYELECRQTKLGSEEITRDIPNVSE+S+SLLDK+G+I+IGSWVD+GDILVGKVTPKGESDQLPEGKLLRAIFGEKARDVRDTSLRLPNATKGRVVNIKIFKRQKGDELPPGTNEIIRVYVAQKRKIQVGDKMAGRHGNKGIISRIL+VQDMPFLPDGTPVDIILNPLGVPSRMNVGQLFECLLGLAG YLGKRFKIIPFDEMYGSEASR LVNNKL+QASLI+ +SWLFN L+PGKV+L+DG TGE FDNPVTVGKAYILKLVHLVDDKIHARSTGPYSLVTQQPLGGRAQHGGQRLGEMEVWALEAFGAAYTLQELLTVKSDDMQGRNDALN+IVKGKPIPKPGTPESFKVLMRELQSLALD+AVHK+ESLD+G KTSIE+DLMSDEQ+EQ SSI
Sbjct:  409 MDQTNPLSELTHKRRISALGPGGLNKDRAGFAVRDLHPSHYGRICPIETPEGPNAGLIGSLSIYAKVNRYGFIETPCYKVIDGQVLKKHKFYYITADQEDYLRIAPADITLDINNNIQNNVIAVRYKQEFITASIKQVDYMAVSPIQFISAATSLIPFLEHDDANRALMGSNMQRQAVPLLFPEKSIVGTGLEAKIAKDSGMTIISRTNGIVSYVSGTKIGIQNKEGYTIHYRLKKYYRSNQDTCINQRPIVWPGENISVGQTIADGASTDGGEIALGRNIIVAYMPWKGYNYEDAFLISERLVYEDLYTSIHIERYELECRQTKLGSEEITRDIPNVSEASISLLDKSGIISIGSWVDAGDILVGKVTPKGESDQLPEGKLLRAIFGEKARDVRDTSLRLPNATKGRVVNIKIFKRQKGDELPPGTNEIIRVYVAQKRKIQVGDKMAGRHGNKGIISRILSVQDMPFLPDGTPVDIILNPLGVPSRMNVGQLFECLLGLAGEYLGKRFKIIPFDEMYGSEASRTLVNNKLKQASLISGKSWLFNKLYPGKVILLDGITGEPFDNPVTVGKAYILKLVHLVDDKIHARSTGPYSLVTQQPLGGRAQHGGQRLGEMEVWALEAFGAAYTLQELLTVKSDDMQGRNDALNAIVKGKPIPKPGTPESFKVLMRELQSLALDVAVHKLESLDNGIKTSIEIDLMSDEQIEQTSSI 1119          
BLAST of Ggra417.t1 vs. uniprot
Match: RPOB (DNA-directed RNA polymerase subunit beta n=28 Tax=Gracilariaceae TaxID=31469 RepID=RPOB_GRATL)

HSP 1 Score: 1330 bits (3441), Expect = 0.000e+0
Identity = 657/705 (93.19%), Postives = 686/705 (97.30%), Query Frame = 0
Query:    1 MDQTNPLSELTHKRRISALGPGGLNKDRAGFAVRDLHPSHYGRICPIETPEGPNAGLIGSLSIYAKVNRYGFIETPCYKVINGQVLKNNNLYYITADQEDYLRIAPADITLDNNDFIKDNVIAVRYKQEFITANINQVDYIAVSPIQFISAATSLIPFLEHDDANRALMGSNMQRQAVPLLFPEKSIVGTGLEAKIAKDSGMIITSRTNGIVSYVSGTKVGIQNKEGYTIHYRLKKYYRSNQDTCINQRPIVWPGENICVGQTIADGASTDGGEIALGRNIIVAYMPWEGYNYEDAFLISERLVYDDLYTSIHIERYELECRQTKLGSEEITRDIPNVSESSVSLLDKNGVIAIGSWVDSGDILVGKVTPKGESDQLPEGKLLRAIFGEKARDVRDTSLRLPNATKGRVVNIKIFKRQKGDELPPGTNEIIRVYVAQKRKIQVGDKMAGRHGNKGIISRILAVQDMPFLPDGTPVDIILNPLGVPSRMNVGQLFECLLGLAGSYLGKRFKIIPFDEMYGSEASRALVNNKLQQASLITNQSWLFNSLHPGKVMLIDGRTGEFFDNPVTVGKAYILKLVHLVDDKIHARSTGPYSLVTQQPLGGRAQHGGQRLGEMEVWALEAFGAAYTLQELLTVKSDDMQGRNDALNSIVKGKPIPKPGTPESFKVLMRELQSLALDIAVHKIESLDDGHKTSIEVDLMSDEQV 705
            MDQTNPLSELTHKRRISALGPGGLNKDRAGFAVRDLHPSHYGRICPIETPEGPNAGLIGSLSIYAKVNRYGFIETPCYKV +GQVLK + LYYITADQEDYLRIAPADI+LD NDFI+D +IAVRYKQEFITA I+QVDY+AVSPIQFISAATSLIPFLEHDDANRALMGSNMQRQAVPLLFPEKSIVGTGLEAKIAKDSGM I SRTNG VSYVSGTK+GIQNKEGYTIHYRLKKYYRSNQDTCINQRPIVWPGENI +GQTIADGASTDGGEIALGRNIIVAYMPWEGYNYEDAFLISERLVY+DLYTSIHIERYELECRQTKLGSEEITRDIPNVSE+S+ LLDKNG+I+IGSWVD+GDILVGKVTPKGESDQLPEGKLLRAIFGEKARDVRDTSLRLPNATKGRVVN+KIFKRQKGDELPPGTNEIIRVYVAQKRKIQVGDKMAGRHGNKGIISRIL++QDMPFLPDGTPVDIILNPLGVPSRMNVGQLFECLLGLAG Y  KRFKIIPFDEMYGSEASRALV NKL+QAS + ++SWLFN+LHPGKVML+DGRTGEFFDNPVTVGKAYILKLVHLVDDKIHARSTGPYSLVTQQPLGGRAQHGGQRLGEMEVWALEAFGAAYTLQELLTVKSDDMQGRNDALN+IVKGKPIPKPGTPESFKVLMRELQSLALDIAVHK+E LD+G+K SIE+DLMSDEQV
Sbjct:  413 MDQTNPLSELTHKRRISALGPGGLNKDRAGFAVRDLHPSHYGRICPIETPEGPNAGLIGSLSIYAKVNRYGFIETPCYKVTDGQVLKKDKLYYITADQEDYLRIAPADISLDVNDFIQDKIIAVRYKQEFITATISQVDYMAVSPIQFISAATSLIPFLEHDDANRALMGSNMQRQAVPLLFPEKSIVGTGLEAKIAKDSGMTIISRTNGTVSYVSGTKIGIQNKEGYTIHYRLKKYYRSNQDTCINQRPIVWPGENIRIGQTIADGASTDGGEIALGRNIIVAYMPWEGYNYEDAFLISERLVYEDLYTSIHIERYELECRQTKLGSEEITRDIPNVSEASIGLLDKNGIISIGSWVDAGDILVGKVTPKGESDQLPEGKLLRAIFGEKARDVRDTSLRLPNATKGRVVNVKIFKRQKGDELPPGTNEIIRVYVAQKRKIQVGDKMAGRHGNKGIISRILSLQDMPFLPDGTPVDIILNPLGVPSRMNVGQLFECLLGLAGEYSSKRFKIIPFDEMYGSEASRALVYNKLKQASSMNDKSWLFNALHPGKVMLVDGRTGEFFDNPVTVGKAYILKLVHLVDDKIHARSTGPYSLVTQQPLGGRAQHGGQRLGEMEVWALEAFGAAYTLQELLTVKSDDMQGRNDALNAIVKGKPIPKPGTPESFKVLMRELQSLALDIAVHKLELLDNGNKASIEIDLMSDEQV 1117          
BLAST of Ggra417.t1 vs. uniprot
Match: A0A345U8D8 (DNA-directed RNA polymerase subunit beta n=3 Tax=Gracilariaceae TaxID=31469 RepID=A0A345U8D8_9FLOR)

HSP 1 Score: 1320 bits (3416), Expect = 0.000e+0
Identity = 648/710 (91.27%), Postives = 687/710 (96.76%), Query Frame = 0
Query:    1 MDQTNPLSELTHKRRISALGPGGLNKDRAGFAVRDLHPSHYGRICPIETPEGPNAGLIGSLSIYAKVNRYGFIETPCYKVINGQVLKNNNLYYITADQEDYLRIAPADITLDNNDFIKDNVIAVRYKQEFITANINQVDYIAVSPIQFISAATSLIPFLEHDDANRALMGSNMQRQAVPLLFPEKSIVGTGLEAKIAKDSGMIITSRTNGIVSYVSGTKVGIQNKEGYTIHYRLKKYYRSNQDTCINQRPIVWPGENICVGQTIADGASTDGGEIALGRNIIVAYMPWEGYNYEDAFLISERLVYDDLYTSIHIERYELECRQTKLGSEEITRDIPNVSESSVSLLDKNGVIAIGSWVDSGDILVGKVTPKGESDQLPEGKLLRAIFGEKARDVRDTSLRLPNATKGRVVNIKIFKRQKGDELPPGTNEIIRVYVAQKRKIQVGDKMAGRHGNKGIISRILAVQDMPFLPDGTPVDIILNPLGVPSRMNVGQLFECLLGLAGSYLGKRFKIIPFDEMYGSEASRALVNNKLQQASLITNQSWLFNSLHPGKVMLIDGRTGEFFDNPVTVGKAYILKLVHLVDDKIHARSTGPYSLVTQQPLGGRAQHGGQRLGEMEVWALEAFGAAYTLQELLTVKSDDMQGRNDALNSIVKGKPIPKPGTPESFKVLMRELQSLALDIAVHKIESLDDGHKTSIEVDLMSDEQVEQMSS 710
            MDQTNPLSELTHKRRISALGPGGLNKDRAGFAVRDLHPSHYGRICPIETPEGPNAGLIGSLSIYAKVNRYGFIETPCYKV+NG+VLK + +YY+TADQEDYL IAPADITLD+ + IKD VIAVRYKQEFITANI QVDY++VSPIQFISAATSLIPFLEHDDANRALMGSNMQRQAVPLLFPEK IVGTGLEAKIA DSGM+ITSRTNGIV+Y+SGTK+GIQNKEGYT+HYRLKKYYRSNQDTCINQRPIVWPGE I  GQ IADGASTD GEIALGRNIIVAYMPWEGYNYEDAFLISERLVYDDLYTSIHIERYELECRQTKLGSEEITRDIPNVSESSVSLLDKNG+I IGSWVDSGDIL+GKVTPKGESDQLPEGKLLRAIFGEKARDVRDTSLRLPNATKGRVVNIK FKRQKGDELPPGTNEIIRVYVAQKRKIQVGDKMAGRHGNKGIIS+IL +QDMPFLPDGTPVDIILNPLGVPSRMNVGQLFECLLGLAG YLGKRFKI+PFDEMYG EASRALVNNKL++ASLI+ + WLF+SLHPGKV+L+DGRTGEFFDNP+TVGKAY+LKLVHLVDDKIHARSTGPYSLVTQQPLGGRAQHGGQRLGEMEVWALEAFGAAYTLQELLTVKSDDMQGRNDALN+IVKGKPIPKPGTPESFKVLMRELQSLALD+AV+K+E LD+G+KTSIE++LMSDEQ+E ++S
Sbjct:  413 MDQTNPLSELTHKRRISALGPGGLNKDRAGFAVRDLHPSHYGRICPIETPEGPNAGLIGSLSIYAKVNRYGFIETPCYKVVNGKVLKQHRVYYVTADQEDYLHIAPADITLDSKNNIKDKVIAVRYKQEFITANIEQVDYMSVSPIQFISAATSLIPFLEHDDANRALMGSNMQRQAVPLLFPEKPIVGTGLEAKIAHDSGMVITSRTNGIVTYLSGTKIGIQNKEGYTVHYRLKKYYRSNQDTCINQRPIVWPGETIRTGQIIADGASTDSGEIALGRNIIVAYMPWEGYNYEDAFLISERLVYDDLYTSIHIERYELECRQTKLGSEEITRDIPNVSESSVSLLDKNGIIVIGSWVDSGDILIGKVTPKGESDQLPEGKLLRAIFGEKARDVRDTSLRLPNATKGRVVNIKTFKRQKGDELPPGTNEIIRVYVAQKRKIQVGDKMAGRHGNKGIISQILPLQDMPFLPDGTPVDIILNPLGVPSRMNVGQLFECLLGLAGEYLGKRFKIVPFDEMYGLEASRALVNNKLREASLISKKHWLFDSLHPGKVLLVDGRTGEFFDNPITVGKAYMLKLVHLVDDKIHARSTGPYSLVTQQPLGGRAQHGGQRLGEMEVWALEAFGAAYTLQELLTVKSDDMQGRNDALNAIVKGKPIPKPGTPESFKVLMRELQSLALDVAVYKLELLDNGNKTSIEINLMSDEQLENINS 1122          
BLAST of Ggra417.t1 vs. uniprot
Match: A0A0C5DG95 (DNA-directed RNA polymerase subunit beta n=7 Tax=Gracilariopsis TaxID=2781 RepID=A0A0C5DG95_GRALE)

HSP 1 Score: 1308 bits (3384), Expect = 0.000e+0
Identity = 639/701 (91.16%), Postives = 679/701 (96.86%), Query Frame = 0
Query:    1 MDQTNPLSELTHKRRISALGPGGLNKDRAGFAVRDLHPSHYGRICPIETPEGPNAGLIGSLSIYAKVNRYGFIETPCYKVINGQVLKNNNLYYITADQEDYLRIAPADITLDNNDFIKDNVIAVRYKQEFITANINQVDYIAVSPIQFISAATSLIPFLEHDDANRALMGSNMQRQAVPLLFPEKSIVGTGLEAKIAKDSGMIITSRTNGIVSYVSGTKVGIQNKEGYTIHYRLKKYYRSNQDTCINQRPIVWPGENICVGQTIADGASTDGGEIALGRNIIVAYMPWEGYNYEDAFLISERLVYDDLYTSIHIERYELECRQTKLGSEEITRDIPNVSESSVSLLDKNGVIAIGSWVDSGDILVGKVTPKGESDQLPEGKLLRAIFGEKARDVRDTSLRLPNATKGRVVNIKIFKRQKGDELPPGTNEIIRVYVAQKRKIQVGDKMAGRHGNKGIISRILAVQDMPFLPDGTPVDIILNPLGVPSRMNVGQLFECLLGLAGSYLGKRFKIIPFDEMYGSEASRALVNNKLQQASLITNQSWLFNSLHPGKVMLIDGRTGEFFDNPVTVGKAYILKLVHLVDDKIHARSTGPYSLVTQQPLGGRAQHGGQRLGEMEVWALEAFGAAYTLQELLTVKSDDMQGRNDALNSIVKGKPIPKPGTPESFKVLMRELQSLALDIAVHKIESLDDGHKTSIEVDLMS 701
            MDQTNPLSELTHKRRISALGPGGLNKDRAGFAVRDLHPSHYGRICPIETPEGPNAGLIGSLSIYAK+N YGFIETP YKV+ GQVLKN  LYYITADQEDYLRIAPADI+L++N++IK++VI VRY+QEF+TAN+NQVDY+AVSPIQFISAATSLIPFLEHDDANRALMGSNMQRQAVPLLF EKSIVGTGLEAKIAKD+GM++TSRTNGIVSYVSGTK+G+Q+K+G T+HYRLKKYYRSNQDTCINQRPIVWPGE I +GQTIADGASTDGGEIALGRNI VAYMPWEGYNYEDAFLISERLVYDDLYTSIHIERYELECRQTKLG EEITRDIPNVSE+S+SLLDKNG+IAIGSWVD+GDILVGKVTPKGESDQLPEGKLLRAIFGEKARDVRDTSLRLPNATKGRVVNIKIFKRQKGDELPPGTNEIIRVYVAQKRKIQVGDKMAGRHGNKGIISRIL +QDMPFLPDGTP+DI+LNPLGVPSRMNVGQLFECLLG+AG YLGKRFKIIPFDEMYG EASRALVNNKL+QASLI  +SWLFN LHPGK+MLIDGRTGEFFDNP+TVGKAYILKLVHLVDDKIHARSTGPYSLVTQQPLGGRAQHGGQRLGEMEVWALEAFGAAYTLQELLTVKSDDMQGRNDALN+IVKGKPIPKPGTPESFKVLMRELQSLALD+AVHK+E  D+G + SIE+DLMS
Sbjct:  409 MDQTNPLSELTHKRRISALGPGGLNKDRAGFAVRDLHPSHYGRICPIETPEGPNAGLIGSLSIYAKINPYGFIETPYYKVVKGQVLKNQQLYYITADQEDYLRIAPADISLNSNNYIKNDVIPVRYQQEFLTANMNQVDYMAVSPIQFISAATSLIPFLEHDDANRALMGSNMQRQAVPLLFSEKSIVGTGLEAKIAKDAGMVVTSRTNGIVSYVSGTKIGVQSKDGCTVHYRLKKYYRSNQDTCINQRPIVWPGEKIVIGQTIADGASTDGGEIALGRNIFVAYMPWEGYNYEDAFLISERLVYDDLYTSIHIERYELECRQTKLGPEEITRDIPNVSEASISLLDKNGIIAIGSWVDAGDILVGKVTPKGESDQLPEGKLLRAIFGEKARDVRDTSLRLPNATKGRVVNIKIFKRQKGDELPPGTNEIIRVYVAQKRKIQVGDKMAGRHGNKGIISRILPMQDMPFLPDGTPIDILLNPLGVPSRMNVGQLFECLLGMAGEYLGKRFKIIPFDEMYGPEASRALVNNKLKQASLINKKSWLFNYLHPGKIMLIDGRTGEFFDNPITVGKAYILKLVHLVDDKIHARSTGPYSLVTQQPLGGRAQHGGQRLGEMEVWALEAFGAAYTLQELLTVKSDDMQGRNDALNAIVKGKPIPKPGTPESFKVLMRELQSLALDVAVHKLELFDNGDQKSIEIDLMS 1109          
BLAST of Ggra417.t1 vs. uniprot
Match: A0A4D6X386 (DNA-directed RNA polymerase subunit beta n=2 Tax=Ceramiaceae TaxID=31377 RepID=A0A4D6X386_9FLOR)

HSP 1 Score: 1261 bits (3264), Expect = 0.000e+0
Identity = 614/704 (87.22%), Postives = 667/704 (94.74%), Query Frame = 0
Query:    1 MDQTNPLSELTHKRRISALGPGGLNKDRAGFAVRDLHPSHYGRICPIETPEGPNAGLIGSLSIYAKVNRYGFIETPCYKVINGQVLKNNNLYYITADQEDYLRIAPADITLDNNDFIKDNVIAVRYKQEFITANINQVDYIAVSPIQFISAATSLIPFLEHDDANRALMGSNMQRQAVPLLFPEKSIVGTGLEAKIAKDSGMIITSRTNGIVSYVSGTKVGIQNKEGYTIHYRLKKYYRSNQDTCINQRPIVWPGENICVGQTIADGASTDGGEIALGRNIIVAYMPWEGYNYEDAFLISERLVYDDLYTSIHIERYELECRQTKLGSEEITRDIPNVSESSVSLLDKNGVIAIGSWVDSGDILVGKVTPKGESDQLPEGKLLRAIFGEKARDVRDTSLRLPNATKGRVVNIKIFKRQKGDELPPGTNEIIRVYVAQKRKIQVGDKMAGRHGNKGIISRILAVQDMPFLPDGTPVDIILNPLGVPSRMNVGQLFECLLGLAGSYLGKRFKIIPFDEMYGSEASRALVNNKLQQASLITNQSWLFNSLHPGKVMLIDGRTGEFFDNPVTVGKAYILKLVHLVDDKIHARSTGPYSLVTQQPLGGRAQHGGQRLGEMEVWALEAFGAAYTLQELLTVKSDDMQGRNDALNSIVKGKPIPKPGTPESFKVLMRELQSLALDIAVHKIESLDDGHKTSIEVDLMSDEQ 704
            MDQTNPLSELTHKRRISALGPGGLNKDRAGFAVRDLHPSHYGRICPIETPEGPNAGLIGSLSIYA+VN+YGFIETPCYKV  G+VL +    YITAD+ED LRIAPADI++D N+ IKD  I +RY+QEF+T+ I+QVDYIAVSPIQ ISAATSLIPFLEHDDANRALMGSNMQRQAVPLL+PEKSIVGTGLEAKIAKD+GM+ITSRT+GIVSYVSGTK+GIQ+ +G TIHYRLKKYYRSNQDTCINQRPIVWPGE +C+GQTIADGASTDGGEIALGRNI+VAYMPWEGYNYEDAFLISERLVYDDLYTSIHIERYE+ECRQTKLG EEITRDIPNVSESS+SLLDKNG+I++GSWVDSGDILVGK+TPKGESDQLPEGKLLRAIFGEKARDVRDTSLRLPNA KGRVVN+K+FKRQKGDELPPGTN IIR+YVAQKRKIQVGDKMAGRHGNKGIIS+IL+ QDMPFLP+G PVDI+LNPLGVPSRMNVGQLFECLLGLAG YL KRFK++PFDEMYG EASRALVNNKLQQAS+ T +SWLFNSL+PGK+ML DGRTGE FDNP+TVGKAY+LKLVHLVDDKIHARSTGPYSLVTQQPLGGRAQHGGQRLGEMEVWALEAFGAAYTLQELLTVKSDDMQGRN+ALN+IVKGKPIPKPGTPESFKVLMRELQSL LDIAVHKIE  ++G    +E+DLMS+++
Sbjct:  407 MDQTNPLSELTHKRRISALGPGGLNKDRAGFAVRDLHPSHYGRICPIETPEGPNAGLIGSLSIYARVNKYGFIETPCYKVHAGKVLSDQLPKYITADEEDDLRIAPADISIDLNNNIKDKNIPIRYRQEFVTSTIDQVDYIAVSPIQVISAATSLIPFLEHDDANRALMGSNMQRQAVPLLYPEKSIVGTGLEAKIAKDAGMVITSRTHGIVSYVSGTKIGIQDIDGRTIHYRLKKYYRSNQDTCINQRPIVWPGEQVCIGQTIADGASTDGGEIALGRNILVAYMPWEGYNYEDAFLISERLVYDDLYTSIHIERYEIECRQTKLGPEEITRDIPNVSESSISLLDKNGIISVGSWVDSGDILVGKITPKGESDQLPEGKLLRAIFGEKARDVRDTSLRLPNAAKGRVVNVKVFKRQKGDELPPGTNAIIRIYVAQKRKIQVGDKMAGRHGNKGIISKILSRQDMPFLPNGIPVDIVLNPLGVPSRMNVGQLFECLLGLAGEYLSKRFKVMPFDEMYGQEASRALVNNKLQQASIATQESWLFNSLYPGKMMLFDGRTGEAFDNPITVGKAYMLKLVHLVDDKIHARSTGPYSLVTQQPLGGRAQHGGQRLGEMEVWALEAFGAAYTLQELLTVKSDDMQGRNEALNAIVKGKPIPKPGTPESFKVLMRELQSLGLDIAVHKIEMFENGENKGVEIDLMSNDK 1110          
BLAST of Ggra417.t1 vs. uniprot
Match: A0A4D6WIY7 (DNA-directed RNA polymerase subunit beta n=1 Tax=Antithamnionella ternifolia TaxID=207919 RepID=A0A4D6WIY7_9FLOR)

HSP 1 Score: 1259 bits (3258), Expect = 0.000e+0
Identity = 615/704 (87.36%), Postives = 661/704 (93.89%), Query Frame = 0
Query:    1 MDQTNPLSELTHKRRISALGPGGLNKDRAGFAVRDLHPSHYGRICPIETPEGPNAGLIGSLSIYAKVNRYGFIETPCYKVINGQVLKNNNLYYITADQEDYLRIAPADITLDNNDFIKDNVIAVRYKQEFITANINQVDYIAVSPIQFISAATSLIPFLEHDDANRALMGSNMQRQAVPLLFPEKSIVGTGLEAKIAKDSGMIITSRTNGIVSYVSGTKVGIQNKEGYTIHYRLKKYYRSNQDTCINQRPIVWPGENICVGQTIADGASTDGGEIALGRNIIVAYMPWEGYNYEDAFLISERLVYDDLYTSIHIERYELECRQTKLGSEEITRDIPNVSESSVSLLDKNGVIAIGSWVDSGDILVGKVTPKGESDQLPEGKLLRAIFGEKARDVRDTSLRLPNATKGRVVNIKIFKRQKGDELPPGTNEIIRVYVAQKRKIQVGDKMAGRHGNKGIISRILAVQDMPFLPDGTPVDIILNPLGVPSRMNVGQLFECLLGLAGSYLGKRFKIIPFDEMYGSEASRALVNNKLQQASLITNQSWLFNSLHPGKVMLIDGRTGEFFDNPVTVGKAYILKLVHLVDDKIHARSTGPYSLVTQQPLGGRAQHGGQRLGEMEVWALEAFGAAYTLQELLTVKSDDMQGRNDALNSIVKGKPIPKPGTPESFKVLMRELQSLALDIAVHKIESLDDGHKTSIEVDLMSDEQ 704
            MDQTNPLSELTHKRRISALGPGGLNKDRAGFAVRDLHPSHYGRICPIETPEGPNAGLIGSLS YA+VN+YGFIETPCYKV  G+VLKN    YITAD+ED LRIA ADI LD+N  IKD  I +RY+QEFIT+NINQVDY+AVSPIQ ISAATSLIPFLEHDDANRALMGSNMQRQAVPLL+PEKSIVGTGLEAKIAKDSGM+ITSRTNG VSYVSGTK+GIQ+ +G TIHYRLKKYYRSNQDTCINQRP+VWPGE + +GQTIADGASTDGGEIALGRNI+VAYMPWEGYNYEDAFLISERLVYDDLYTSIHIERYE+ECRQTKLG EEITR+IPNVSESS+SLLDKNG+I IGSWVDSGDILVGK+TPKGESDQLPEGKLLRAIFGEKARDVRDTSLRLPNA KGRVVN+K+FKRQKGDELPPGTN IIR+YVAQKRKIQVGDKMAGRHGNKGIIS+IL  QDMPFLP+G PVDIILNPLGVPSRMNVGQ+FECLLGLAG +L KRFK++PFDEMYG EASRALVNNKL+QASL + Q+WLFN LHPGKVML DGRTGE FDNP+TVGKAYILKLVHLVDDKIHARSTGPYSLVTQQPLGGRAQHGGQRLGEMEVWALEAFGAAYTLQELLTVKSDDMQGRN+ALN+IVKGKPIPKPGTPESFKVLMRELQSL LDIA+HK+E  D+G    +E+DLMS+++
Sbjct:  407 MDQTNPLSELTHKRRISALGPGGLNKDRAGFAVRDLHPSHYGRICPIETPEGPNAGLIGSLSTYARVNKYGFIETPCYKVEKGKVLKNTKPIYITADEEDELRIASADIPLDSNLNIKDKNIPIRYRQEFITSNINQVDYMAVSPIQVISAATSLIPFLEHDDANRALMGSNMQRQAVPLLYPEKSIVGTGLEAKIAKDSGMVITSRTNGTVSYVSGTKIGIQDIDGRTIHYRLKKYYRSNQDTCINQRPLVWPGEKVSIGQTIADGASTDGGEIALGRNILVAYMPWEGYNYEDAFLISERLVYDDLYTSIHIERYEIECRQTKLGPEEITREIPNVSESSISLLDKNGIITIGSWVDSGDILVGKITPKGESDQLPEGKLLRAIFGEKARDVRDTSLRLPNAAKGRVVNVKVFKRQKGDELPPGTNAIIRIYVAQKRKIQVGDKMAGRHGNKGIISKILPRQDMPFLPNGMPVDIILNPLGVPSRMNVGQIFECLLGLAGEHLSKRFKVMPFDEMYGQEASRALVNNKLRQASLFSQQTWLFNHLHPGKVMLFDGRTGESFDNPITVGKAYILKLVHLVDDKIHARSTGPYSLVTQQPLGGRAQHGGQRLGEMEVWALEAFGAAYTLQELLTVKSDDMQGRNEALNAIVKGKPIPKPGTPESFKVLMRELQSLGLDIAIHKLEMFDNGENKGVEIDLMSNDR 1110          
BLAST of Ggra417.t1 vs. uniprot
Match: A0A345UAR2 (DNA-directed RNA polymerase subunit beta n=1 Tax=Melanthalia intermedia TaxID=172989 RepID=A0A345UAR2_9FLOR)

HSP 1 Score: 1258 bits (3255), Expect = 0.000e+0
Identity = 609/701 (86.88%), Postives = 666/701 (95.01%), Query Frame = 0
Query:    1 MDQTNPLSELTHKRRISALGPGGLNKDRAGFAVRDLHPSHYGRICPIETPEGPNAGLIGSLSIYAKVNRYGFIETPCYKVINGQVLKNNNLYYITADQEDYLRIAPADITLDNNDFIKDNVIAVRYKQEFITANINQVDYIAVSPIQFISAATSLIPFLEHDDANRALMGSNMQRQAVPLLFPEKSIVGTGLEAKIAKDSGMIITSRTNGIVSYVSGTKVGIQNKEGYTIHYRLKKYYRSNQDTCINQRPIVWPGENICVGQTIADGASTDGGEIALGRNIIVAYMPWEGYNYEDAFLISERLVYDDLYTSIHIERYELECRQTKLGSEEITRDIPNVSESSVSLLDKNGVIAIGSWVDSGDILVGKVTPKGESDQLPEGKLLRAIFGEKARDVRDTSLRLPNATKGRVVNIKIFKRQKGDELPPGTNEIIRVYVAQKRKIQVGDKMAGRHGNKGIISRILAVQDMPFLPDGTPVDIILNPLGVPSRMNVGQLFECLLGLAGSYLGKRFKIIPFDEMYGSEASRALVNNKLQQASLITNQSWLFNSLHPGKVMLIDGRTGEFFDNPVTVGKAYILKLVHLVDDKIHARSTGPYSLVTQQPLGGRAQHGGQRLGEMEVWALEAFGAAYTLQELLTVKSDDMQGRNDALNSIVKGKPIPKPGTPESFKVLMRELQSLALDIAVHKIESLDDGHKTSIEVDLMS 701
            MDQTNPLSELTHKRRIS+LGPGGLNKDRAGFAVRDLHPSHYGRICPIETPEGPNAGLIGSLSI AKVNRYGFIETPCYKV NGQVLK+  +YYITADQEDYLRIAPAD++LD+++FIK+NVI VRY QEFITA+ +QVDYIA+SPIQFISAATSLIPFLEH+DANR LMGSNMQRQAVPLL+PEK ++GTGLEAKIA+D+G+ + SRT+GIV YVS TK+GIQ+K+G  +HYRLKKYYRSNQDTCINQRP VWPGE + +GQTIADGAST+GGEIALGRNI+VAYMPWEG+NYEDAFLISERLVYDDLYTSIHIERYELECRQTKLGSE ITRD+PNVSE+S+ LLDKNG+I+IGSWVDSGDILVGKVTPKGESDQLPEGKLLRAIFGEKARD+RDTSLRLPNA KGRVVNIK FKRQ+GDELPPGTNEIIR+YVAQKRKIQVGDKMAGRHGNKGIISRIL++QDMPFLPDGTP+DIILNPLGVPSRMNVGQLFECLLGLAG YL KRFKI+PFDEMYGSEASRALVNNKL++ASL  ++SWLFN LHPGK+ML+DGRTGE F NP+TVGKAYILKLVHLVDDKIHARSTGPYSLVTQQPLGGRAQHGGQRLGEMEVWALEAFGAAYTLQELLTVKSDDMQGRNDALN+IVKG+PIPK GTPESFKVLMRELQSLALDI V+K++  DDG + S+E+DLMS
Sbjct:  409 MDQTNPLSELTHKRRISSLGPGGLNKDRAGFAVRDLHPSHYGRICPIETPEGPNAGLIGSLSICAKVNRYGFIETPCYKVDNGQVLKDQPIYYITADQEDYLRIAPADVSLDSDNFIKNNVIPVRYNQEFITASASQVDYIAMSPIQFISAATSLIPFLEHNDANRVLMGSNMQRQAVPLLYPEKPLIGTGLEAKIARDAGVTVISRTSGIVVYVSATKIGIQDKDGSVVHYRLKKYYRSNQDTCINQRPAVWPGEKVVLGQTIADGASTEGGEIALGRNILVAYMPWEGFNYEDAFLISERLVYDDLYTSIHIERYELECRQTKLGSELITRDLPNVSEASIGLLDKNGIISIGSWVDSGDILVGKVTPKGESDQLPEGKLLRAIFGEKARDIRDTSLRLPNAAKGRVVNIKTFKRQRGDELPPGTNEIIRIYVAQKRKIQVGDKMAGRHGNKGIISRILSIQDMPFLPDGTPIDIILNPLGVPSRMNVGQLFECLLGLAGDYLNKRFKILPFDEMYGSEASRALVNNKLKEASLAAHKSWLFNPLHPGKIMLVDGRTGESFHNPITVGKAYILKLVHLVDDKIHARSTGPYSLVTQQPLGGRAQHGGQRLGEMEVWALEAFGAAYTLQELLTVKSDDMQGRNDALNAIVKGRPIPKSGTPESFKVLMRELQSLALDIGVYKLDLFDDGRQKSVEIDLMS 1109          
BLAST of Ggra417.t1 vs. uniprot
Match: A0A1C9C8K9 (DNA-directed RNA polymerase subunit beta n=2 Tax=Rhodymeniophycidae TaxID=2045261 RepID=A0A1C9C8K9_9FLOR)

HSP 1 Score: 1258 bits (3254), Expect = 0.000e+0
Identity = 614/704 (87.22%), Postives = 661/704 (93.89%), Query Frame = 0
Query:    1 MDQTNPLSELTHKRRISALGPGGLNKDRAGFAVRDLHPSHYGRICPIETPEGPNAGLIGSLSIYAKVNRYGFIETPCYKVINGQVLKNNNLYYITADQEDYLRIAPADITLDNNDFIKDNVIAVRYKQEFITANINQVDYIAVSPIQFISAATSLIPFLEHDDANRALMGSNMQRQAVPLLFPEKSIVGTGLEAKIAKDSGMIITSRTNGIVSYVSGTKVGIQNKEGYTIHYRLKKYYRSNQDTCINQRPIVWPGENICVGQTIADGASTDGGEIALGRNIIVAYMPWEGYNYEDAFLISERLVYDDLYTSIHIERYELECRQTKLGSEEITRDIPNVSESSVSLLDKNGVIAIGSWVDSGDILVGKVTPKGESDQLPEGKLLRAIFGEKARDVRDTSLRLPNATKGRVVNIKIFKRQKGDELPPGTNEIIRVYVAQKRKIQVGDKMAGRHGNKGIISRILAVQDMPFLPDGTPVDIILNPLGVPSRMNVGQLFECLLGLAGSYLGKRFKIIPFDEMYGSEASRALVNNKLQQASLITNQSWLFNSLHPGKVMLIDGRTGEFFDNPVTVGKAYILKLVHLVDDKIHARSTGPYSLVTQQPLGGRAQHGGQRLGEMEVWALEAFGAAYTLQELLTVKSDDMQGRNDALNSIVKGKPIPKPGTPESFKVLMRELQSLALDIAVHKIESLDDGHKTSIEVDLMSDEQ 704
            MDQTNPLSELTHKRRISALGPGGLNKDRAGFAVRDLHPSHYGRICPIETPEGPNAGLIGSLSIYA+VNRYGFIETPCYKV  G+VL + +  YITAD+ED LRIAPADI LD  ++IK  VI VRY+QEFITA I QVDY+ VSPIQ ISAATSLIPFLEHDDANRALMGSNMQRQAVPLL+PEK+IVGTGLEAK+AKDSGM++TSRTNG+VSYVSGTK+GI++ E  T+HYRLKKYYRSNQDTCINQRP+VWPGE++ VGQ IADGASTDGGEIALGRNI+VAYMPWEGYNYEDAFLISERLVYDDLYTSIHIERYELECRQTKLG EEITRDIPNVSE+++SLLD NG+I++GSWVDSGDILVGK+TPKGESDQLPEGKLLRAIFGEKARDVRDTSLRLPNA +GRVVN+K+FKRQ GDELPPGTN IIR+YVAQKRKIQVGDKMAGRHGNKGIISRIL  QDMPFLPDGTPVDI+LNPLGVPSRMNVGQLFECLLGLAG YL KRFK+IPFDEMYG EASRALVNNKL+QASLI+NQSWLFNSLHPGK+ L DGRTGE FDNP+TVGKAYILKLVHLVDDKIHARSTGPYSLVTQQPLGGRAQHGGQRLGEMEVWALEAFGAAYTLQELLTVKSDDMQGRN+ALN+IVKGKPIPKPGTPESFKVLMRELQSL LDIAVHK+E  D+G    +EVDLMS ++
Sbjct:  407 MDQTNPLSELTHKRRISALGPGGLNKDRAGFAVRDLHPSHYGRICPIETPEGPNAGLIGSLSIYARVNRYGFIETPCYKVELGKVLNDQSPVYITADEEDDLRIAPADIPLDYKNYIKYKVIPVRYRQEFITATIEQVDYMTVSPIQVISAATSLIPFLEHDDANRALMGSNMQRQAVPLLYPEKAIVGTGLEAKVAKDSGMVVTSRTNGVVSYVSGTKIGIKDFESRTVHYRLKKYYRSNQDTCINQRPLVWPGEHVLVGQIIADGASTDGGEIALGRNILVAYMPWEGYNYEDAFLISERLVYDDLYTSIHIERYELECRQTKLGPEEITRDIPNVSEAAISLLDNNGIISVGSWVDSGDILVGKITPKGESDQLPEGKLLRAIFGEKARDVRDTSLRLPNAARGRVVNVKVFKRQSGDELPPGTNAIIRIYVAQKRKIQVGDKMAGRHGNKGIISRILPRQDMPFLPDGTPVDIVLNPLGVPSRMNVGQLFECLLGLAGEYLRKRFKVIPFDEMYGPEASRALVNNKLKQASLISNQSWLFNSLHPGKIKLCDGRTGEAFDNPITVGKAYILKLVHLVDDKIHARSTGPYSLVTQQPLGGRAQHGGQRLGEMEVWALEAFGAAYTLQELLTVKSDDMQGRNEALNAIVKGKPIPKPGTPESFKVLMRELQSLGLDIAVHKVELFDNGENKGVEVDLMSSDK 1110          
BLAST of Ggra417.t1 vs. uniprot
Match: A0A1C9C9S1 (DNA-directed RNA polymerase subunit beta n=1 Tax=Sebdenia flabellata TaxID=42024 RepID=A0A1C9C9S1_9FLOR)

HSP 1 Score: 1256 bits (3250), Expect = 0.000e+0
Identity = 611/701 (87.16%), Postives = 663/701 (94.58%), Query Frame = 0
Query:    1 MDQTNPLSELTHKRRISALGPGGLNKDRAGFAVRDLHPSHYGRICPIETPEGPNAGLIGSLSIYAKVNRYGFIETPCYKVINGQVLKNNNLYYITADQEDYLRIAPADITLDNNDFIKDNVIAVRYKQEFITANINQVDYIAVSPIQFISAATSLIPFLEHDDANRALMGSNMQRQAVPLLFPEKSIVGTGLEAKIAKDSGMIITSRTNGIVSYVSGTKVGIQNKEGYTIHYRLKKYYRSNQDTCINQRPIVWPGENICVGQTIADGASTDGGEIALGRNIIVAYMPWEGYNYEDAFLISERLVYDDLYTSIHIERYELECRQTKLGSEEITRDIPNVSESSVSLLDKNGVIAIGSWVDSGDILVGKVTPKGESDQLPEGKLLRAIFGEKARDVRDTSLRLPNATKGRVVNIKIFKRQKGDELPPGTNEIIRVYVAQKRKIQVGDKMAGRHGNKGIISRILAVQDMPFLPDGTPVDIILNPLGVPSRMNVGQLFECLLGLAGSYLGKRFKIIPFDEMYGSEASRALVNNKLQQASLITNQSWLFNSLHPGKVMLIDGRTGEFFDNPVTVGKAYILKLVHLVDDKIHARSTGPYSLVTQQPLGGRAQHGGQRLGEMEVWALEAFGAAYTLQELLTVKSDDMQGRNDALNSIVKGKPIPKPGTPESFKVLMRELQSLALDIAVHKIESLDDGHKTSIEVDLMS 701
            MDQTNPLSELTHKRRISALGPGGLNKDRAGFAVRDLHPSHYGRICPIETPEGPNAGLIGSLSIYA+VN+YGFIETPCYKV NG+VLK+    YITAD+ED LRIAPADI+L+ +++I +++I VRY+QEFITA ++QVDYIAVSPIQ ISAATSLIPFLEHDDANRALMGSNMQRQAVPLL+PEK I+GTGLEAKIA+DSGM++TSRT G+VSYVSGTK+GIQ+ E  TIHYRL+KYYRSNQDTCINQRPIVWPGE + +GQ IADGASTDGGEIALGRNI VAYMPW+GYNYEDAFLISERLVY+DLYTSIHIERYELECRQTKLG EEITRDIPNVSESS+SLLDKNG+I+IGSWVDSGDILVGK+TPKGESDQLPEGKLLRAIFGEKARDVRD+SLRLPNA KGRVVN+K+FKRQKGDELPPGTN IIR+YVAQKRKIQVGDKMAGRHGNKGIISRIL +QDMPFLPDGTP+DIILNPLGVPSRMNVGQLFECLLGLAG YLGKRFKI+PFDEMYG EASR+LVNNKL+QASL+  QSW+F+ LHPGKVML DGRTGE FDNP+TVGKAYILKLVHLVDDKIHARSTGPYSLVTQQPLGGRAQHGGQRLGEMEVWALEAFGAAYTLQELLTVKSDDMQGRN+ALN+IVKGKPIPKPGTPESFKVL+RELQSL LD+AVHKIE  ++G    IEVDLMS
Sbjct:  409 MDQTNPLSELTHKRRISALGPGGLNKDRAGFAVRDLHPSHYGRICPIETPEGPNAGLIGSLSIYARVNQYGFIETPCYKVKNGKVLKDVLPNYITADEEDNLRIAPADISLNKDNYISNDIIPVRYRQEFITATVDQVDYIAVSPIQVISAATSLIPFLEHDDANRALMGSNMQRQAVPLLYPEKCIIGTGLEAKIARDSGMVVTSRTQGVVSYVSGTKIGIQDSEARTIHYRLRKYYRSNQDTCINQRPIVWPGEKVVIGQIIADGASTDGGEIALGRNIFVAYMPWQGYNYEDAFLISERLVYEDLYTSIHIERYELECRQTKLGPEEITRDIPNVSESSLSLLDKNGIISIGSWVDSGDILVGKITPKGESDQLPEGKLLRAIFGEKARDVRDSSLRLPNAAKGRVVNVKVFKRQKGDELPPGTNVIIRIYVAQKRKIQVGDKMAGRHGNKGIISRILPIQDMPFLPDGTPIDIILNPLGVPSRMNVGQLFECLLGLAGQYLGKRFKIVPFDEMYGEEASRSLVNNKLRQASLLNKQSWIFSPLHPGKVMLCDGRTGESFDNPITVGKAYILKLVHLVDDKIHARSTGPYSLVTQQPLGGRAQHGGQRLGEMEVWALEAFGAAYTLQELLTVKSDDMQGRNEALNAIVKGKPIPKPGTPESFKVLIRELQSLGLDVAVHKIELFENGKNKGIEVDLMS 1109          
BLAST of Ggra417.t1 vs. uniprot
Match: A0A1C9CAW2 (DNA-directed RNA polymerase subunit beta n=2 Tax=Ahnfeltia TaxID=28022 RepID=A0A1C9CAW2_9FLOR)

HSP 1 Score: 1255 bits (3247), Expect = 0.000e+0
Identity = 614/701 (87.59%), Postives = 659/701 (94.01%), Query Frame = 0
Query:    1 MDQTNPLSELTHKRRISALGPGGLNKDRAGFAVRDLHPSHYGRICPIETPEGPNAGLIGSLSIYAKVNRYGFIETPCYKVINGQVLKNNNLYYITADQEDYLRIAPADITLDNNDFIKDNVIAVRYKQEFITANINQVDYIAVSPIQFISAATSLIPFLEHDDANRALMGSNMQRQAVPLLFPEKSIVGTGLEAKIAKDSGMIITSRTNGIVSYVSGTKVGIQNKEGYTIHYRLKKYYRSNQDTCINQRPIVWPGENICVGQTIADGASTDGGEIALGRNIIVAYMPWEGYNYEDAFLISERLVYDDLYTSIHIERYELECRQTKLGSEEITRDIPNVSESSVSLLDKNGVIAIGSWVDSGDILVGKVTPKGESDQLPEGKLLRAIFGEKARDVRDTSLRLPNATKGRVVNIKIFKRQKGDELPPGTNEIIRVYVAQKRKIQVGDKMAGRHGNKGIISRILAVQDMPFLPDGTPVDIILNPLGVPSRMNVGQLFECLLGLAGSYLGKRFKIIPFDEMYGSEASRALVNNKLQQASLITNQSWLFNSLHPGKVMLIDGRTGEFFDNPVTVGKAYILKLVHLVDDKIHARSTGPYSLVTQQPLGGRAQHGGQRLGEMEVWALEAFGAAYTLQELLTVKSDDMQGRNDALNSIVKGKPIPKPGTPESFKVLMRELQSLALDIAVHKIESLDDGHKTSIEVDLMS 701
            MDQTNPL+ELTHKRRISALGPGGLNKDRAGFAVRDLHPSHYGRICPIETPEGPNAGLIGSLSIYAKVN+YGFIETPCYKV  G+VL+N    Y+TAD+ED L IAPADI LD +D+I+  VI VRY+QEFITA  NQVDYIAVSPIQ ISAATSLIPFLEHDDANRALMGSNMQRQAVPLL+PEKSIVGTGLEAK+A+DSGM++TSRTNG V+YVS TK+GIQ+ EG T+HYRLKKYYRSNQDTCINQRPIVW GENI VGQTIADGASTDGGEIALGRNI+VAYMPWEGYNYEDAFLISERLVY+D+YTSIHIERYELECRQTKLG EEITR+IPNVSESS+S LDKNG+IA+GSWVDSGDILVGK+TPKGESDQLPEGKLLRAIFGEKARDVRDTSLRLPNA KGR+VNI++F RQKGDELPPGTN IIRVYVAQKRKIQVGDKMAGRHGNKGIISRIL  QDMP++PDGTP+DI+LNPLGVPSRMNVGQLFECLLGLAG YLGKRFKIIPFDEMYG+EASRALVNNKL++ASL  NQSWLF+S HPGK+ML DGRTGE FDNPVTVGKAYILKLVHLVDDKIHARSTGPYSLVTQQPLGGRAQHGGQRLGEMEVWALEAFGAAYTLQELLTVKSDDMQGRN+ALN+IVKGKPIPKPGTPESFKVLMRELQSL LDI VHK++  +DG   S+EVDLMS
Sbjct:  407 MDQTNPLAELTHKRRISALGPGGLNKDRAGFAVRDLHPSHYGRICPIETPEGPNAGLIGSLSIYAKVNQYGFIETPCYKVELGRVLRNTIPVYMTADEEDDLHIAPADIALDESDYIQGEVIPVRYRQEFITATANQVDYIAVSPIQIISAATSLIPFLEHDDANRALMGSNMQRQAVPLLYPEKSIVGTGLEAKVARDSGMVVTSRTNGRVTYVSATKIGIQDLEGRTVHYRLKKYYRSNQDTCINQRPIVWAGENIVVGQTIADGASTDGGEIALGRNILVAYMPWEGYNYEDAFLISERLVYEDIYTSIHIERYELECRQTKLGPEEITREIPNVSESSISQLDKNGIIAVGSWVDSGDILVGKITPKGESDQLPEGKLLRAIFGEKARDVRDTSLRLPNAAKGRIVNIRVFTRQKGDELPPGTNAIIRVYVAQKRKIQVGDKMAGRHGNKGIISRILPRQDMPYMPDGTPIDIVLNPLGVPSRMNVGQLFECLLGLAGEYLGKRFKIIPFDEMYGAEASRALVNNKLKEASLFYNQSWLFDSRHPGKIMLFDGRTGEPFDNPVTVGKAYILKLVHLVDDKIHARSTGPYSLVTQQPLGGRAQHGGQRLGEMEVWALEAFGAAYTLQELLTVKSDDMQGRNEALNAIVKGKPIPKPGTPESFKVLMRELQSLGLDIGVHKVKLFEDGENRSVEVDLMS 1107          
The following BLAST results are available for this feature:
BLAST of Ggra417.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A345U8Z40.000e+093.53DNA-directed RNA polymerase subunit beta n=1 Tax=A... [more]
RPOB0.000e+093.19DNA-directed RNA polymerase subunit beta n=28 Tax=... [more]
A0A345U8D80.000e+091.27DNA-directed RNA polymerase subunit beta n=3 Tax=G... [more]
A0A0C5DG950.000e+091.16DNA-directed RNA polymerase subunit beta n=7 Tax=G... [more]
A0A4D6X3860.000e+087.22DNA-directed RNA polymerase subunit beta n=2 Tax=C... [more]
A0A4D6WIY70.000e+087.36DNA-directed RNA polymerase subunit beta n=1 Tax=A... [more]
A0A345UAR20.000e+086.88DNA-directed RNA polymerase subunit beta n=1 Tax=M... [more]
A0A1C9C8K90.000e+087.22DNA-directed RNA polymerase subunit beta n=2 Tax=R... [more]
A0A1C9C9S10.000e+087.16DNA-directed RNA polymerase subunit beta n=1 Tax=S... [more]
A0A1C9CAW20.000e+087.59DNA-directed RNA polymerase subunit beta n=2 Tax=A... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR042107DNA-directed RNA polymerase, beta subunit, external 1 domain superfamilyGENE3D2.30.150.10coord: 76..144
e-value: 2.2E-14
score: 55.3
IPR007645RNA polymerase Rpb2, domain 3PFAMPF04565RNA_pol_Rpb2_3coord: 1..67
e-value: 2.7E-28
score: 97.9
IPR007120DNA-directed RNA polymerase, subunit 2, hybrid-binding domainPFAMPF00562RNA_pol_Rpb2_6coord: 206..606
e-value: 3.0E-152
score: 507.2
IPR019462DNA-directed RNA polymerase, beta subunit, external 1 domainPFAMPF10385RNA_pol_Rpb2_45coord: 79..144
e-value: 1.0E-12
score: 48.2
NoneNo IPR availableGENE3D2.40.50.100coord: 202..274
e-value: 4.8E-25
score: 89.1
NoneNo IPR availableGENE3D3.90.1100.10coord: 1..201
e-value: 1.0E-50
score: 174.8
NoneNo IPR availableGENE3D3.90.1800.10RNA polymerase alpha subunit dimerisation domaincoord: 594..646
e-value: 2.6E-15
score: 58.7
NoneNo IPR availablePANTHERPTHR20856:SF20DNA-DIRECTED RNA POLYMERASE SUBUNIT BETAcoord: 1..680
NoneNo IPR availableSUPERFAMILY64484beta and beta-prime subunits of DNA dependent RNA-polymerasecoord: 1..683
IPR007641RNA polymerase Rpb2, domain 7PFAMPF04560RNA_pol_Rpb2_7coord: 608..682
e-value: 6.1E-24
score: 84.2
IPR037033DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamilyGENE3D2.40.270.10coord: 275..344
e-value: 1.0E-7
score: 33.9
coord: 400..584
e-value: 3.2E-68
score: 231.7
IPR015712DNA-directed RNA polymerase, subunit 2PANTHERPTHR20856DNA-DIRECTED RNA POLYMERASE I SUBUNIT 2coord: 1..680
IPR015712DNA-directed RNA polymerase, subunit 2CDDcd00653RNA_pol_B_RPB2coord: 1..682
e-value: 0.0
score: 778.672
IPR007121RNA polymerase, beta subunit, conserved sitePROSITEPS01166RNA_POL_BETAcoord: 444..456

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000928_piloncontigtig00000928_pilon:119105..121240 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra417.t1Ggra417.t1Gracilaria gracilis GNS1m malemRNAtig00000928_pilon 119105..121240 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra417.t1 ID=Ggra417.t1|Name=Ggra417.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=712bp
MDQTNPLSELTHKRRISALGPGGLNKDRAGFAVRDLHPSHYGRICPIETP
EGPNAGLIGSLSIYAKVNRYGFIETPCYKVINGQVLKNNNLYYITADQED
YLRIAPADITLDNNDFIKDNVIAVRYKQEFITANINQVDYIAVSPIQFIS
AATSLIPFLEHDDANRALMGSNMQRQAVPLLFPEKSIVGTGLEAKIAKDS
GMIITSRTNGIVSYVSGTKVGIQNKEGYTIHYRLKKYYRSNQDTCINQRP
IVWPGENICVGQTIADGASTDGGEIALGRNIIVAYMPWEGYNYEDAFLIS
ERLVYDDLYTSIHIERYELECRQTKLGSEEITRDIPNVSESSVSLLDKNG
VIAIGSWVDSGDILVGKVTPKGESDQLPEGKLLRAIFGEKARDVRDTSLR
LPNATKGRVVNIKIFKRQKGDELPPGTNEIIRVYVAQKRKIQVGDKMAGR
HGNKGIISRILAVQDMPFLPDGTPVDIILNPLGVPSRMNVGQLFECLLGL
AGSYLGKRFKIIPFDEMYGSEASRALVNNKLQQASLITNQSWLFNSLHPG
KVMLIDGRTGEFFDNPVTVGKAYILKLVHLVDDKIHARSTGPYSLVTQQP
LGGRAQHGGQRLGEMEVWALEAFGAAYTLQELLTVKSDDMQGRNDALNSI
VKGKPIPKPGTPESFKVLMRELQSLALDIAVHKIESLDDGHKTSIEVDLM
SDEQVEQMSSI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR042107DNA-dir_RNA_pol_bsu_ext_1_sf
IPR007645RNA_pol_Rpb2_3
IPR007120DNA-dir_RNAP_su2_dom
IPR019462DNA-dir_RNA_pol_bsu_external_1
IPR007641RNA_pol_Rpb2_7
IPR037033DNA-dir_RNAP_su2_hyb_sf
IPR015712DNA-dir_RNA_pol_su2
IPR007121RNA_pol_bsu_CS