Ggra4167.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra4167.t1
Unique NameGgra4167.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length237
Homology
BLAST of Ggra4167.t1 vs. uniprot
Match: A0A2V3IC93 (Uncharacterized protein n=4 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IC93_9FLOR)

HSP 1 Score: 146 bits (369), Expect = 5.610e-37
Identity = 100/208 (48.08%), Postives = 126/208 (60.58%), Query Frame = 0
Query:   31 VPIEQSGRRDGGSGGSGPGLGRNTPLAGDLVYFDPWDYQEISREQAEEFRAAPREIPSDHPRGYVDSDNYYHAYSGGDSMVDNDPDASGETVEDDGDEAD-----AVGNDNQVGNAPAEPGSNTPADPNTGQSAAAXXXXXXXXXXXXXASAGSGNPSSGPLNEQEIIARFLRGAGLSATEASGDVVEMADALANRLGGGAPPSGGSG 233
            VP+  + R    SG  GPGLGRNTPLAGD ++FDPWD+++++R +AE +R APRE+P DHPRGYVD+D+Y+ +Y GGD  VDNDP+   + V D G EAD     AV   N   + PA P S    DP        XXXXXX               ++ P     +IA+FLR  GLSA E +GD+  M D LANRLGGG PPSG +G
Sbjct:  437 VPLANAQRNHLRSG-YGPGLGRNTPLAGDYIFFDPWDFRKLTRAEAESYRDAPREVPEDHPRGYVDADDYHRSYIGGDPKVDNDPEGPVDAVVD-GSEADGVVGGAVDGRNGFNSGPAVPTS--AKDPPXXXXXXXXXXXXXSPTYPAIXXXXXXXVANDPGG---VIAQFLREVGLSANEVTGDIAAMRDTLANRLGGGPPPSGNNG 637          
BLAST of Ggra4167.t1 vs. uniprot
Match: A0A2V3ISH1 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISH1_9FLOR)

HSP 1 Score: 124 bits (310), Expect = 4.660e-31
Identity = 57/88 (64.77%), Postives = 73/88 (82.95%), Query Frame = 0
Query:   29 DEVPIEQSGRRDGGSGGSGPGLGRNTPLAGDLVYFDPWDYQEISREQAEEFRAAPREIPSDHPRGYVDSDNYYHAYSGGDSMVDNDPD 116
            DEVPI+ S RR   +G SGPGLGRNT LAGD ++FDPW+Y+E++RE+AE++R APR +P DHPRG+VD D+YY +Y GGD MVDN+PD
Sbjct:   77 DEVPIDNSQRRLHHNG-SGPGLGRNTALAGDYIFFDPWEYRELTREEAEDYRNAPRMVPPDHPRGFVDLDDYYRSYIGGDPMVDNEPD 163          
BLAST of Ggra4167.t1 vs. uniprot
Match: A0A2V3J6T0 (Uncharacterized protein n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6T0_9FLOR)

HSP 1 Score: 54.7 bits (130), Expect = 4.270e-6
Identity = 27/42 (64.29%), Postives = 32/42 (76.19%), Query Frame = 0
Query:  192 IIARFLRGAGLSATEASGDVVEMADALANRLGGGAPPSGGSG 233
            +IA+FLR  GLSA E +GD+  M D LANRLGGG PPSG +G
Sbjct:   82 VIAQFLREVGLSANEVTGDIAAMRDTLANRLGGGPPPSGNNG 123          
The following BLAST results are available for this feature:
BLAST of Ggra4167.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3IC935.610e-3748.08Uncharacterized protein n=4 Tax=Gracilariopsis cho... [more]
A0A2V3ISH14.660e-3164.77Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J6T04.270e-664.29Uncharacterized protein n=2 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 32..53
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 72..96
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 72..192
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 217..236
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 117..131
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 140..164

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000853_piloncontigtig00000853_pilon:444008..444836 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra4167.t1Ggra4167.t1Gracilaria gracilis GNS1m malemRNAtig00000853_pilon 444008..444836 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra4167.t1 ID=Ggra4167.t1|Name=Ggra4167.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=237bp
MVGCGDRVGYPLRGIRPHRGLRPLSALCDEVPIEQSGRRDGGSGGSGPGL
GRNTPLAGDLVYFDPWDYQEISREQAEEFRAAPREIPSDHPRGYVDSDNY
YHAYSGGDSMVDNDPDASGETVEDDGDEADAVGNDNQVGNAPAEPGSNTP
ADPNTGQSAAAVTTEQEDGPPPPSASAGSGNPSSGPLNEQEIIARFLRGA
GLSATEASGDVVEMADALANRLGGGAPPSGGSGSNH*
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