Ggra4007.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra4007.t1
Unique NameGgra4007.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length328
Homology
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BLAST of Ggra4007.t1 vs. uniprot
Match: A0A2V3ITF9 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ITF9_9FLOR)

HSP 1 Score: 204 bits (518), Expect = 1.010e-61
Identity = 96/141 (68.09%), Postives = 116/141 (82.27%), Query Frame = 0 
Query:    1 MPKGMAIRRPRSLEMHATIVDIPEGADVFKSLNDAADEAGYVPTIVLSGVGLLSRAVLYVPNDEAIPEAMDIEQSLGVKLDLDGTKYPELHDLPRIRVDEARASGINVPEETRDFRSKPHWYSKQSFDKPLSLLYARGGRT 141
            MPKGM  RRP+ LEMHAT+V++PEGADV + LN AAD+AGY P+I+LSGVGLLS+AVLYV NDEAIPE  DIE+++ +K D DGTKYPELHDLPRIR+DEA   GI+   +  + RS PHWYS+Q FD PLS+LYARGGR+
Sbjct:    1 MPKGMQNRRPQLLEMHATLVNVPEGADVLQFLNSAADDAGYAPSIILSGVGLLSKAVLYVANDEAIPEVPDIEKNMSIKPDFDGTKYPELHDLPRIRIDEATEYGISEDVDFPELRSPPHWYSRQVFDHPLSILYARGGRS 141
The following BLAST results are available for this feature:
BLAST of Ggra4007.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3ITF91.010e-6168.09Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005175PPC domainPFAMPF03479PCCcoord: 201..318
e-value: 8.0E-8
score: 32.6
IPR005175PPC domainPROSITEPS51742PPCcoord: 192..327
score: 13.791124
NoneNo IPR availableGENE3D3.30.1330.80coord: 16..196
e-value: 1.7E-6
score: 29.9
NoneNo IPR availableGENE3D3.30.1330.80coord: 197..323
e-value: 3.4E-9
score: 38.3
NoneNo IPR availableSUPERFAMILY117856AF0104/ALDC/Ptd012-likecoord: 197..312

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000908_piloncontigtig00000908_pilon:327634..328617 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra4007.t1Ggra4007.t1Gracilaria gracilis GNS1m malemRNAtig00000908_pilon 327634..328617 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra4007.t1 ID=Ggra4007.t1|Name=Ggra4007.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=328bp
MPKGMAIRRPRSLEMHATIVDIPEGADVFKSLNDAADEAGYVPTIVLSGV
GLLSRAVLYVPNDEAIPEAMDIEQSLGVKLDLDGTKYPELHDLPRIRVDE
ARASGINVPEETRDFRSKPHWYSKQSFDKPLSLLYARGGRTYNRKRYRYH
MILSGSEERTFGRANSFVGEMLPGCVAKNPLQFVIGVSANMFKTNVQAWG
ITIEPGYDVIERMTCFLNARQNVGECFIVSADGLVSEAVLANICEAGEEE
QYYVRDESKPYHIEDISGIVNHVFGTSRIHATIVLNCEEPPCEAVGGRLI
KAIASLEKPVEIVLGEITDEKDMIHSE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005175PPC_dom