Ggra4006.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra4006.t1
Unique NameGgra4006.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length174
Homology
BLAST of Ggra4006.t1 vs. uniprot
Match: A0A2V3IQN6 (Centrin-1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQN6_9FLOR)

HSP 1 Score: 277 bits (708), Expect = 3.270e-93
Identity = 140/173 (80.92%), Postives = 163/173 (94.22%), Query Frame = 0
Query:    1 MPDVELDIENTASRPIARRQELTEERKQEIREVFELFDSENTGMVEKRQLRVLMRSLGYEPRKDQLARLIVACGISQRATQIKYDEFHALMEKMINERDIQEEMMHAFSLFDTDDSGKITFQNLREVADQLGERMTDDELQEMIREADMDKDGMVSATEFVRIMKKTSLWSAQ 173
            MPDVE+++EN  +RPIARRQELTEERK+EIRE+FEL  SE TG VEK++LRV+MR LGYEPRKDQLARLIV+CGISQRATQI Y++FHALMEK INERDIQEEMM AFSLFDTD++GKITF+NLREVADQLGE+M+D+EL+EMIREAD+DKDG+V+ATEFVRIMKKTSLW+AQ
Sbjct:    1 MPDVEINLENEGTRPIARRQELTEERKEEIRELFELHASEETGTVEKKELRVMMRLLGYEPRKDQLARLIVSCGISQRATQINYEQFHALMEKTINERDIQEEMMRAFSLFDTDNTGKITFENLREVADQLGEKMSDEELREMIREADIDKDGVVNATEFVRIMKKTSLWAAQ 173          
BLAST of Ggra4006.t1 vs. uniprot
Match: R7Q450 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q450_CHOCR)

HSP 1 Score: 206 bits (523), Expect = 2.020e-64
Identity = 105/163 (64.42%), Postives = 133/163 (81.60%), Query Frame = 0
Query:    8 IENTASRPIARRQELTEERKQEIREVFELFDSENTGMVEKRQLRVLMRSLGYEPRKDQLARLIVACGISQRATQIKYDEFHALMEKMINERDIQEEMMHAFSLFDTDDSGKITFQNLREVADQLGERMTDDELQEMIREADMDKDGMVSATEFVRIMKKTSLW 170
            I+ T SRP+A+R ELTEE K EIRE FELFDS  +GMV +R+L+V+MR+L + PRK+QL+R+++  GI+ +A QI Y +F  L+ +++NERDIQEEMM AF LFD D +GKI+ +NLR VADQLGE+MTD+EL EMIREADMDKDG VS TEF+RIMKKT LW
Sbjct:   56 IDTTPSRPLAKRPELTEEAKVEIREAFELFDSSGSGMVARRELKVMMRALDFTPRKEQLSRVLLQSGIAVKAYQISYPDFENLIFQLMNERDIQEEMMKAFELFDVDKTGKISAENLRTVADQLGEKMTDEELAEMIREADMDKDGAVSDTEFIRIMKKTDLW 218          
BLAST of Ggra4006.t1 vs. uniprot
Match: A0A0L0DD54 (Caltractin n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DD54_THETB)

HSP 1 Score: 155 bits (392), Expect = 3.130e-45
Identity = 81/152 (53.29%), Postives = 115/152 (75.66%), Query Frame = 0
Query:   19 RQELTEERKQEIREVFELFDSENTGMVEKRQLRVLMRSLGYEPRKDQLARLIVACGISQRATQIKYDEFHALMEKMINERDIQEEMMHAFSLFDTDDSGKITFQNLREVADQLGERMTDDELQEMIREADMDKDGMVSATEFVRIMKKTSLW 170
            RQELTEE++QEIRE F+LFD++++G ++ R+L+V MR+LG+EP +D+L ++I A          +Y EF  +M   ++ERD +EE++ AF LFD DD+GKI+F+NL+ VA +LGE +TD+ELQEMI EAD D DG VS  +F+RIM KTSL+
Sbjct:   17 RQELTEEQRQEIREAFDLFDTDSSGTIDARELKVAMRALGFEPSRDELKKMI-AXXXXXXXXXXEYSEFEQMMVSKMSERDGKEEILKAFRLFDDDDTGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSQDDFMRIMAKTSLF 167          
BLAST of Ggra4006.t1 vs. uniprot
Match: A0A1W7RAW0 (Calglandulin n=1 Tax=Hadrurus spadix TaxID=141984 RepID=A0A1W7RAW0_9SCOR)

HSP 1 Score: 155 bits (392), Expect = 3.330e-45
Identity = 81/150 (54.00%), Postives = 115/150 (76.67%), Query Frame = 0
Query:   21 ELTEERKQEIREVFELFDSENTGMVEKRQLRVLMRSLGYEPRKDQLARLIVACGISQRATQIKYDEFHALMEKMINERDIQEEMMHAFSLFDTDDSGKITFQNLREVADQLGERMTDDELQEMIREADMDKDGMVSATEFVRIMKKTSLW 170
            ELTEE+KQ+I+E F+LFD+E TG +E ++L+V MR+LG+EPRK+++ +LIVA     +  +I +D+F  LM   + E+D  EE++ AF LFD D++GKI+F NL+ VA +LGE +TD+ELQEMI EAD D DG+V+  EF+ IMKKTSL+
Sbjct:   22 ELTEEQKQDIKEAFDLFDAEGTGYIEGKELKVAMRALGFEPRKEEI-KLIVAEIDKNKLGKIGFDDFVTLMTTKMAEKDTNEEILKAFQLFDIDNTGKISFDNLKSVAKELGENLTDEELQEMITEADKDGDGLVNQEEFLHIMKKTSLY 170          
BLAST of Ggra4006.t1 vs. uniprot
Match: A0A3Q2DI18 (Caltractin-like n=2 Tax=Cyprinodon TaxID=28741 RepID=A0A3Q2DI18_CYPVA)

HSP 1 Score: 155 bits (391), Expect = 4.860e-45
Identity = 79/150 (52.67%), Postives = 118/150 (78.67%), Query Frame = 0
Query:   21 ELTEERKQEIREVFELFDSENTGMVEKRQLRVLMRSLGYEPRKDQLARLIVACGISQRATQIKYDEFHALMEKMINERDIQEEMMHAFSLFDTDDSGKITFQNLREVADQLGERMTDDELQEMIREADMDKDGMVSATEFVRIMKKTSLW 170
            ELTEE+KQEI+E F+LFD++ TG ++ ++L+V MR+LG+EP+K+++ ++ VA  +   +  I +D+F ++M + +NE+D  EE+M AF LFD D +GKI+F+NL+ VA +LGE +TD+EL+EMI EAD D DG VS TEF+RIMKKT+L+
Sbjct:   23 ELTEEQKQEIKEAFDLFDTDGTGTIDVKELKVAMRALGFEPKKEEIKKM-VAEFVKDNSGIIDFDDFLSMMTQKMNEKDSTEEIMKAFRLFDDDCTGKISFKNLKRVAKELGETLTDEELKEMIDEADQDGDGEVSETEFLRIMKKTNLY 171          
BLAST of Ggra4006.t1 vs. uniprot
Match: A0A670K1H1 (Uncharacterized protein n=2 Tax=Sauria TaxID=32561 RepID=A0A670K1H1_PODMU)

HSP 1 Score: 155 bits (391), Expect = 5.010e-45
Identity = 81/155 (52.26%), Postives = 120/155 (77.42%), Query Frame = 0
Query:   17 ARRQELTEERKQEIREVFELFDSENTGMVEKRQLRVLMRSLGYEPRKDQLARLIVACGISQRAT-QIKYDEFHALMEKMINERDIQEEMMHAFSLFDTDDSGKITFQNLREVADQLGERMTDDELQEMIREADMDKDGMVSATEFVRIMKKTSLW 170
            A + ELTEE+KQEIRE F+LFD++ TG ++ ++L+V MR+LG+EP+KD++ ++I+   I +  T +I Y +F  +M + + E+D +EE++ AF LFD D++GKI+F+NL+ VA +LGE +TD+ELQEMI EAD D DG V+  EF+RIMKKTSL+
Sbjct:   20 APKTELTEEQKQEIREAFDLFDTDGTGNIDVKELKVAMRALGFEPKKDEIKKMIL--DIDKEGTGKITYHDFLGVMTQKMAEKDSKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVNEQEFLRIMKKTSLY 172          
BLAST of Ggra4006.t1 vs. uniprot
Match: A0A067QNL7 (Centrin-1 n=2 Tax=Zootermopsis nevadensis TaxID=136037 RepID=A0A067QNL7_ZOONE)

HSP 1 Score: 155 bits (391), Expect = 6.390e-45
Identity = 81/151 (53.64%), Postives = 115/151 (76.16%), Query Frame = 0
Query:   21 ELTEERKQEIREVFELFDSENTGMVEKRQLRVLMRSLGYEPRKDQLARLIVACGISQRATQI-KYDEFHALMEKMINERDIQEEMMHAFSLFDTDDSGKITFQNLREVADQLGERMTDDELQEMIREADMDKDGMVSATEFVRIMKKTSLW 170
            ELTEE+K +I+E F+LFD+E TG +E ++L+V MR+LG+EPRK+++ ++I    + +  T I  YDEF  LM   + E+D +EE++ AF LFD D++GKI+F+NL+ VA +LGE +TD+ELQEMI EAD D DG +S  EF+RIMKKTSL+
Sbjct:   32 ELTEEQKADIKEAFDLFDAEGTGKIETKELKVAMRALGFEPRKEEIKKIIT--DVDREGTGILSYDEFLGLMTVKMAEKDCKEEILKAFRLFDDDETGKISFKNLKRVAKELGETLTDEELQEMIDEADRDGDGEISQEEFLRIMKKTSLY 180          
BLAST of Ggra4006.t1 vs. uniprot
Match: A0A8C5GFD7 (Caltractin-like n=2 Tax=Gouania willdenowi TaxID=441366 RepID=A0A8C5GFD7_9TELE)

HSP 1 Score: 154 bits (389), Expect = 1.010e-44
Identity = 74/150 (49.33%), Postives = 116/150 (77.33%), Query Frame = 0
Query:   21 ELTEERKQEIREVFELFDSENTGMVEKRQLRVLMRSLGYEPRKDQLARLIVACGISQRATQIKYDEFHALMEKMINERDIQEEMMHAFSLFDTDDSGKITFQNLREVADQLGERMTDDELQEMIREADMDKDGMVSATEFVRIMKKTSLW 170
            +LTEE+KQEI+E F+LFD++ TG ++ ++L+V MR+LG+EP+K+++ +++      + +  I +++F  LM + +NE+D +EE+M AF LFD D +GKI+F+NL+ VA +LGE +TD+EL+EMI EAD D DG V+  EF+RIMKKT+L+
Sbjct:   23 DLTEEQKQEIKEAFDLFDTDGTGSIDVKELKVAMRALGFEPKKEEIKKMVADFVDKENSGTINFEDFLTLMTQKMNEKDSKEEIMKAFRLFDDDGTGKISFKNLKRVAKELGENLTDEELEEMIEEADRDGDGEVNEQEFLRIMKKTNLY 172          
BLAST of Ggra4006.t1 vs. uniprot
Match: G0UR48 (Putative centrin n=1 Tax=Trypanosoma congolense (strain IL3000) TaxID=1068625 RepID=G0UR48_TRYCI)

HSP 1 Score: 154 bits (389), Expect = 1.730e-44
Identity = 85/159 (53.46%), Postives = 113/159 (71.07%), Query Frame = 0
Query:   22 LTEERKQEIREVFELFDSENTGMVEKRQLRVLMRSLGYEPRKDQLARLIVACGISQRATQ----------IKYDEFHALMEKMINERDIQEEMMHAFSLFDTDDSGKITFQNLREVADQLGERMTDDELQEMIREADMDKDGMVSATEFVRIMKKTSLW 170
            LTEE++ EIRE F+LFD++ +G ++ ++L+V MR+LG+EPRKD++ RL+ A    +  T           I + EF  LM + +NERD +EEM+ AF LFD D +GKITF+NL+ VA +LGE MTD ELQEMI EAD D DG VS  EF+RIMKKTSL+
Sbjct:   32 LTEEQRLEIREAFDLFDTDGSGTIDVKELKVAMRALGFEPRKDEVRRLLAATMEERAETAPGKAISDSHVIGFPEFVDLMSRKMNERDSREEMLKAFHLFDDDKTGKITFKNLKRVAQELGENMTDAELQEMIDEADRDGDGEVSEEEFLRIMKKTSLY 190          
BLAST of Ggra4006.t1 vs. uniprot
Match: caltractin-like isoform X1 n=2 Tax=Limulus polyphemus TaxID=6850 RepID=UPI0006B074DD (caltractin-like isoform X1 n=2 Tax=Limulus polyphemus TaxID=6850 RepID=UPI0006B074DD)

HSP 1 Score: 153 bits (387), Expect = 2.280e-44
Identity = 77/152 (50.66%), Postives = 115/152 (75.66%), Query Frame = 0
Query:   19 RQELTEERKQEIREVFELFDSENTGMVEKRQLRVLMRSLGYEPRKDQLARLIVACGISQRATQIKYDEFHALMEKMINERDIQEEMMHAFSLFDTDDSGKITFQNLREVADQLGERMTDDELQEMIREADMDKDGMVSATEFVRIMKKTSLW 170
            +QELTEE+KQ+I+E F LFD ENTG ++ ++L+  +R+LG+EP+K+++ ++I      + + +I +D+F  +M   + E+DI EE+M AF LFD D++GKI+F+NL+ VA +LGE +TD+ELQEMI EAD D DG V+  EF+RIMKKT L+
Sbjct:   26 KQELTEEQKQDIKEAFNLFDPENTGTIDTKELKFALRALGFEPKKEEIKKMIAEVD-KEGSGKIAFDDFLNVMSTRMAEKDINEEIMKAFQLFDDDNTGKISFKNLKRVAKELGENLTDEELQEMIEEADRDGDGEVNQEEFLRIMKKTCLY 176          
The following BLAST results are available for this feature:
BLAST of Ggra4006.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IQN63.270e-9380.92Centrin-1 n=1 Tax=Gracilariopsis chorda TaxID=4483... [more]
R7Q4502.020e-6464.42Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A0L0DD543.130e-4553.29Caltractin n=1 Tax=Thecamonas trahens ATCC 50062 T... [more]
A0A1W7RAW03.330e-4554.00Calglandulin n=1 Tax=Hadrurus spadix TaxID=141984 ... [more]
A0A3Q2DI184.860e-4552.67Caltractin-like n=2 Tax=Cyprinodon TaxID=28741 Rep... [more]
A0A670K1H15.010e-4552.26Uncharacterized protein n=2 Tax=Sauria TaxID=32561... [more]
A0A067QNL76.390e-4553.64Centrin-1 n=2 Tax=Zootermopsis nevadensis TaxID=13... [more]
A0A8C5GFD71.010e-4449.33Caltractin-like n=2 Tax=Gouania willdenowi TaxID=4... [more]
G0UR481.730e-4453.46Putative centrin n=1 Tax=Trypanosoma congolense (s... [more]
caltractin-like isoform X1 n=2 Tax=Limulus polyphemus TaxID=6850 RepID=UPI0006B074DD2.280e-4450.66caltractin-like isoform X1 n=2 Tax=Limulus polyphe... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainSMARTSM00054efh_1coord: 29..57
e-value: 0.059
score: 22.5
coord: 139..167
e-value: 1.9E-6
score: 37.4
coord: 103..131
e-value: 0.006
score: 25.8
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 102..165
e-value: 2.3E-13
score: 50.4
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 99..134
score: 12.755995
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 135..170
score: 13.341799
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 25..60
score: 11.668075
IPR002048EF-hand domainCDDcd00051EFhcoord: 103..165
e-value: 5.07461E-17
score: 69.1137
NoneNo IPR availableGENE3D1.10.238.10coord: 99..170
e-value: 3.6E-22
score: 80.2
NoneNo IPR availableGENE3D1.10.238.10coord: 16..98
e-value: 1.4E-17
score: 65.4
NoneNo IPR availablePANTHERPTHR23050CALCIUM BINDING PROTEINcoord: 10..169
IPR029527Centrin-1PANTHERPTHR23050:SF218CENTRIN-1coord: 10..169
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 148..160
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 17..166

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000908_piloncontigtig00000908_pilon:326342..326951 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra4006.t1Ggra4006.t1Gracilaria gracilis GNS1m malemRNAtig00000908_pilon 326342..326951 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra4006.t1 ID=Ggra4006.t1|Name=Ggra4006.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=174bp
MPDVELDIENTASRPIARRQELTEERKQEIREVFELFDSENTGMVEKRQL
RVLMRSLGYEPRKDQLARLIVACGISQRATQIKYDEFHALMEKMINERDI
QEEMMHAFSLFDTDDSGKITFQNLREVADQLGERMTDDELQEMIREADMD
KDGMVSATEFVRIMKKTSLWSAQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR029527CETN1
IPR018247EF_Hand_1_Ca_BS
IPR011992EF-hand-dom_pair