Ggra4002.t1 (polypeptide) Gracilaria gracilis GNS1m male
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Overview
Homology
BLAST of Ggra4002.t1 vs. uniprot
Match: A0A2V3IRQ4 (DNA repair protein XRCC2-like n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRQ4_9FLOR) HSP 1 Score: 330 bits (847), Expect = 5.330e-110 Identity = 165/312 (52.88%), Postives = 234/312 (75.00%), Query Frame = 0
Query: 1 MTSESISQAIAKRLGSYPLSGK---IDKALPPIIATGVGILDEVDQNPVRLGSLVDISGVTMSGKTQLLHVITAHILLDQSNEKGSVVCWFDLNRGLDPDRLRHLMRLKHNKN-SNINHDDHIDKLAGLKVYYPSSTIAMCASLHALEDFISTEEGQGVRAVVIDSLGSFHYIDKYNFDNSVADTSVRKQSHELVLGKVIENLLSLRKVVVFASKACLYDETTLDVPWPFPQSGVPMVPKEFMPDLWKNLVTHLLLMYHIE-TPSEGQSSYRRGIVAMRYPEPLRSNIRRAVISAAAVAMFDNDGVVIDSLH 307
M+ + +S+AIA RLG++ + +D+ ++ TG+ +LDE PVRLGSL+D++GV++SGKTQ+LH I A+ LL+++ G VVCW+DLNRGLDP+RLR ++ K + SN+ D I L GL VY PSST+++CAS+H L+ F+S E G GV+ V+IDSLGSFHY+DKY FD+ + D+S KQS ELVL +V+E +LSLRKVVV+ SK+CL+DE LD+PWPFP++GVP +PK+FMPDLWKNL +H++LMYHIE T S+ + RRG+VAM Y +P ++ IR+ V+ +A++A +NDG+ +SLH
Sbjct: 1 MSPDPVSRAIAARLGTFAIPRNRLTVDRGAA-VVRTGLAVLDETRDMPVRLGSLIDVTGVSLSGKTQVLHFIAAYALLNRTCGNGPVVCWYDLNRGLDPNRLRQMIISKQRQGGSNVTERD-ISDLDGLLVYRPSSTLSLCASIHDLKRFLSAE-GAGVQTVIIDSLGSFHYMDKYEFDSGLRDSSTMKQSIELVLARVLEPILSLRKVVVYVSKSCLFDEVKLDIPWPFPRAGVPSMPKDFMPDLWKNLTSHIILMYHIESTSSDYNNGARRGVVAMYYKDPQKNLIRKPVVGSASLATINNDGLFFESLH 309
BLAST of Ggra4002.t1 vs. uniprot
Match: R7Q2X9 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q2X9_CHOCR) HSP 1 Score: 116 bits (290), Expect = 7.750e-28 Identity = 62/155 (40.00%), Postives = 97/155 (62.58%), Query Frame = 0
Query: 155 VRAVVIDSLGSFHYIDKYNFDNS-VADTSVRKQSHELVLGKVIENLLSLRKVVVFASKACLYDETTLDVPWPFPQSGVPMVPKEFMPDLWKNLVTHLLLMYHIETPSEGQSS-------YRRGIVAMRYPEPLRSNIRRAVISAAAVAMFDNDGV 301
VR V+ID+LG+FHY+DK+ S V + + ++E VL V+ LL +KV+VFASK+ L++E L V WPF Q+G+P +P+EFMP W+++ H +L+Y ++G+S+ RRGIV++ E S IR ++AA+ D+DG+
Sbjct: 35 VRNVIIDALGTFHYLDKFQISTSDVREKAPGSGTNEFVLVNVLRELLKSQKVIVFASKSALFEEEALGVKWPFSQAGIPSIPREFMPSSWRSISLHTVLLYFT---ADGRSAEAHERIDQRRGIVSLLRNED-NSFIREMTVTAASTIRIDSDGI 185
BLAST of Ggra4002.t1 vs. uniprot
Match: A0A1Q3BCH8 (RECA_2 domain-containing protein n=1 Tax=Cephalotus follicularis TaxID=3775 RepID=A0A1Q3BCH8_CEPFO) HSP 1 Score: 62.0 bits (149), Expect = 2.620e-7 Identity = 60/236 (25.42%), Postives = 111/236 (47.03%), Query Frame = 0
Query: 45 PVRLGSLVDISGVTMSGKTQLL-HVITAHILLDQSNEKGSVVCWFDLNRGLDPDRLRHLMRLKHNKNSNINHDDH------IDKLAGLKVYYPSSTIAMCASLHALEDFISTEEGQGVRAVVIDSLGSFHYIDKYNFDNSVADTSVRK----QSHELVLGKVIENLLSLRKVVVFASKACLYDE--TTLDVPWPFPQ------------SGVPMVP--KEFMPDLWKNLVTHLLLM 253
P+RLG+++++ G + SGKT +L IL + G +V + DL+ D RL HL+ + N N D H + + L+ Y I+ +LH G GVR ++ID++G+FH++D+ + + RK QS + + I+ LL + +++ ++K + + +T + W F + S P +E+MP +W++ VTH +++
Sbjct: 37 PLRLGNVIELVGPSPSGKTHILMEAAITCILPREYGGLGHLVIFIDLDCRFDISRLSHLLNHRILL-LNANDDLHQLFVSCMTRFLYLRCYDSLQLISTLKTLHYRLQKERETHGVGVRFLIIDNIGAFHWVDRAA-TQAPPQGNYRKCLSLQSVSEAVVEEIKKLLLVHPMLLISTKTTVLGDKFSTNEAKWNFGKRSSLDTSYSRNISSSTRQPSYREYMPSVWQSFVTHRIIV 270
BLAST of Ggra4002.t1 vs. uniprot
Match: A0A2G5BCH6 (Rad51 domain-containing protein n=1 Tax=Coemansia reversa (strain ATCC 12441 / NRRL 1564) TaxID=763665 RepID=A0A2G5BCH6_COERN) HSP 1 Score: 60.1 bits (144), Expect = 1.070e-6 Identity = 45/142 (31.69%), Postives = 75/142 (52.82%), Query Frame = 0
Query: 33 TGVGILDEVDQNPVRLGSLVDISGVTMSGKTQLLH-VITAHILLDQSNEKGSVVCWFDLNRGLDPDRLRHLMRLKHNKNSNINHDDHI--DKLAGLKVYYPSSTIAMCASLHALEDFISTEEGQGVRAVVIDSLGSFHYIDK 171
TGV +D + ++V+++G SGKTQ L+ + AH L E+G VV + D++ +D +L MR DD + + L + V+ P++T+A+ A+L L ++ + V AVV+D LGS H+ID+
Sbjct: 41 TGVEAIDAALRQTDGTQTVVELAGTAGSGKTQTLYRICAAHALAGADGERGHVV-FVDVDGRMDVRQLAQTMRATAG-------DDAVAAEALQRVHVFAPATTVALIATLATLGVYVGARRAR-VTAVVVDGLGSNHWIDQ 173
BLAST of Ggra4002.t1 vs. uniprot
Match: DNA repair protein XRCC2 homolog n=2 Tax=Maleae TaxID=721813 RepID=UPI000511508D (DNA repair protein XRCC2 homolog n=2 Tax=Maleae TaxID=721813 RepID=UPI000511508D) HSP 1 Score: 58.5 bits (140), Expect = 3.800e-6 Identity = 57/245 (23.27%), Postives = 115/245 (46.94%), Query Frame = 0
Query: 37 ILDEVDQNPVRLGSLVDISGVTMSGKTQLLHVITAHILLDQS------NEKGSVVCWFDLNRGLDPDRLRHLMRLK-HNKNSNINHDDHIDKLAG-----LKVYYPSSTIAMCASLHALEDFISTEEGQGVRAVVIDSLGSFHYIDKYNFDNSVADTSVRKQSHELVLGKVIENLLSLRKV---VVFASKACL----YDETTLDVPWPFPQ--------SGVPMVP-KEFMPDLWKNLVTHLLLM 253
++ + + P+R+G++V++ G + S KT +L + +L + +V + DL+ D RL +++L+ N ++N+D+ + L ++ Y +A ++H E + ++IDS+GSFH+ID+ + + D ++ S + V V++ + L+ V +V A+K + Y FP+ S +P +E+MP +W++ VTH LL+
Sbjct: 28 LIPPLHRVPLRVGNVVELVGPSSSAKTLILIQAAVNCILPKEWNGVHYGGLERLVMFLDLDCRFDILRLSEVLKLRIMEPNGSMNYDEGLFNLCMRRFLYVRCYDSRQFLATLKTMHYRLRKEKEEHHVSIYLLMIDSIGSFHWIDRGSTFFPLGDEKRKRLSLQSVSDAVVQEIRKLQLVHPMLVIATKEIILGNAYGAYEAKQNTSFPEVSDLRNSTSNTQQLPYREYMPSVWQSFVTHKLLV 272 The following BLAST results are available for this feature:
BLAST of Ggra4002.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 5
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Ggra4002.t1 ID=Ggra4002.t1|Name=Ggra4002.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=311bpback to top |