Ggra3992.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra3992.t1
Unique NameGgra3992.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length630
Homology
BLAST of Ggra3992.t1 vs. uniprot
Match: A0A2V3ISR9 (Splicing factor 3B subunit 2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISR9_9FLOR)

HSP 1 Score: 609 bits (1570), Expect = 1.060e-210
Identity = 326/504 (64.68%), Postives = 378/504 (75.00%), Query Frame = 0
Query:  130 DAVEYVPEQIAVLDDAQQLAKLDGADRSGDADNIDQVISSMRRFMQRGIPDEDAQPEQPNEDDANASKSEENALQTNGRAHVRAPEHANGQDAEGGKD-GAQLKQMSRKKQKELRRYQISILKSLTNRPEAVDAWDVTAPDPFLLVHLKTWPNSVQVPSNWRQKRKYLQNKRGMEKKAFQLPAYIADTGVGEMRSAQIEADQKKSLKQRQREKMRAKTGRGVEIDHSRLRDAFFKYQTKPRLTSHGDIYYELRELEVDGSQFRPGFLSEELRAALGVSEGDPPLWLVSMQRYGPPPGYPGLKIPGVNAPIPKGGNYGYHMGGWGKPPVDEYGRPIYGDVFGEGLDFGRYDSRFDFDDHKKKKLWGELRKPGSKVTVAVGVDEESEGSEQEGEDHADVGQLKGAAQVPTGNVQERVLREDEHATHGESVR-KGVEPGRLYTVLEDRRVSVGQNTIMGSSHVYDV--SKNVGANADSSREKVSDKRQRDGGEERRDVPVKRSKFKF 629
            D VEYVPE IA L D+Q     D    + DAD+ID ++S+M+RFMQRG+P  D +    +E   +  +S +N  +T G    R  +   G+ +E   D G   K +SRKKQKE RRYQ+S+LKS T RPE VDAWDVTAPDPFLLV LKTWPN+VQVP NWRQKRKYLQNKRGMEKK FQLPAYI DTGVGEMRSAQIEADQKK+LKQRQREKMRAKTGRGVEIDHSRLRDAFFKYQTKPRLT HGD+YYELRELEVDGSQF+PG LSEELRAAL VSEGDPPLWLV+MQRYGPPPGYPGLKIPGVNAPIP G  YGYH+GGWGKPPVDEYGRPIYGDVFGEG+DFG +D RFD +D++KK+LWGE+RKPGSKVTVAVGV E SE  E   ++                                E++R K  E G LY +L+ ++ SVGQN+++GSSHVY++    N   NA + ++K  DKR+RDGG+ERR+  VKRSKFKF
Sbjct:   69 DEVEYVPEPIAALGDSQMQQSGDEK-HALDADDIDNIVSTMQRFMQRGVPQNDEEETITHEGVEDLPESGDNTNKTAGHKEDRVEDEI-GEASETPDDKGTGTKPLSRKKQKETRRYQVSLLKSWTERPEVVDAWDVTAPDPFLLVKLKTWPNAVQVPINWRQKRKYLQNKRGMEKKPFQLPAYIVDTGVGEMRSAQIEADQKKTLKQRQREKMRAKTGRGVEIDHSRLRDAFFKYQTKPRLTKHGDVYYELRELEVDGSQFKPGVLSEELRAALAVSEGDPPLWLVNMQRYGPPPGYPGLKIPGVNAPIPPGARYGYHIGGWGKPPVDEYGRPIYGDVFGEGIDFGNHDKRFDLNDNEKKQLWGEIRKPGSKVTVAVGVQENSE-DEDTDDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETIRPKMAETGSLYKILQQKKSSVGQNSMLGSSHVYEMPDKDNNKGNASARKDKGGDKRERDGGDERREAQVKRSKFKF 569          
BLAST of Ggra3992.t1 vs. uniprot
Match: R7QGY8 (PSP domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QGY8_CHOCR)

HSP 1 Score: 457 bits (1176), Expect = 1.650e-151
Identity = 243/398 (61.06%), Postives = 292/398 (73.37%), Query Frame = 0
Query:  234 MSRKKQKELRRYQISILKSLTNRPEAVDAWDVTAPDPFLLVHLKTWPNSVQVPSNWRQKRKYLQNKRGMEKKAFQLPAYIADTGVGEMRSAQIEADQKKSLKQRQREKMRAKTGRGVEIDHSRLRDAFFKYQTKPRLTSHGDIYYELRELEVDGSQFRPGFLSEELRAALGVSEGDPPLWLVSMQRYGPPPGYPGLKIPGVNAPIPKGGNYGYHMGGWGKPPVDEYGRPIYGDVFGEGLDFGRYDSRFDFDDHKKKKLWGELRKPGSKVTVAVGVDEESEGSEQEGEDHADVGQLKGAAQVPTGNVQERVLREDEHATHGES-VRKGVEPGRLYTVLEDRRVSVGQNTIMGSSHVYDVSKNVGANADSSREKVSDKRQRD-GGEERRDVPVKRSKFKF 629
            MSRK++KE +R  IS LK+L+  PE V+AWD+T PDP LLVHLK  PNSV VPSNWRQKRKYLQNKRGMEK+AFQLPAYI DTGVGE+R AQ+EAD+ KSLKQRQREKMRAKTGRGVEIDH+RL DAFFK+QTKPRLT HGD+YYELRELE D S+FRPG L EELRAALG+ EGDPP WLV+MQRYGPPPG+ GL++PGVN PIP G  +G+  GGWGKPPVD  GRP+YGDVF EGL+FG  D RFD  +  K KLWGE+ K  S+  V V  +EE    E+EGE   DV   + A++          + E   A  G++ VRKG+  G+LY+VLE+++VSVG+  +MGSSHVY V++          E   +KR+RD    E +    K  +FKF
Sbjct:  160 MSRKQRKEHQRNLISHLKALSAAPEVVEAWDITGPDPLLLVHLKALPNSVPVPSNWRQKRKYLQNKRGMEKRAFQLPAYIVDTGVGELRHAQMEADESKSLKQRQREKMRAKTGRGVEIDHARLHDAFFKFQTKPRLTPHGDVYYELRELEPDASKFRPGVLGEELRAALGMGEGDPPPWLVNMQRYGPPPGWRGLRVPGVNCPIPSGARFGFQAGGWGKPPVDGRGRPLYGDVFDEGLEFGERDERFDLSEAAKAKLWGEVEKVASEDGVRVVAEEEETEKEEEGEKRRDVESARVASEKGVE------VPESGAAVVGDAPVRKGIPAGQLYSVLEEQQVSVGETGMMGSSHVYRVNE---TGETGGGEDKGEKRKRDESAVEVKRTQKKAKEFKF 548          
BLAST of Ggra3992.t1 vs. uniprot
Match: A0A0A0LMT1 (PSP domain-containing protein n=12 Tax=Cucurbitaceae TaxID=3650 RepID=A0A0A0LMT1_CUCSA)

HSP 1 Score: 311 bits (797), Expect = 1.640e-94
Identity = 173/361 (47.92%), Postives = 235/361 (65.10%), Query Frame = 0
Query:  234 MSRKKQKELRRYQISILKSLTNRPEAVDAWDVTAPDPFLLVHLKTWPNSVQVPSNWRQKRKYLQNKRGMEKKAFQLPAYIADTGVGEMRSAQIEADQKKSLKQRQREKMRAKTGRGVEIDHSRLRDAFFKYQTKPRLTSHGDIYYELRELEVDGSQFRPGFLSEELRAALGVSEGDPPLWLVSMQRYGPPPGYPGLKIPGVNAPIPKGGNYGYHMGGWGKPPVDEYGRPIYGDVFGEGLDFGRYDSRFDFDDHKKKKLWGELRKPGSKVTVAVGVDEESEGSEQEGEDHADVGQLKGAAQVPTGNVQERV--LREDEHATHGESVRKGVEPGR-LYTVLEDRRVSVGQNTIMGSSHVYDVS 591
            +S KK+K  RR +I+ LK + +RP+ V+ WD TA DP LLV+LK++ N+V VP +W QKRK+LQ KRG+EK+ FQLP +IA TG+ ++R A IE +  K LKQ+QRE+M+ K G+ ++ID+  L DAFFKYQTKP+LT+ GD+YYE +E EV   + +PG LS+EL+ ALG+ EG PP WL++MQRYGPPP YP LKIPG+NAPIP G ++GYH GGWGKPPVDEYGRP+YGDVFG      +  + ++ +   K K WG+L +                   ++G +  D       +  PTG     V  LR+ +        RK  EP R LY VLE++   V   T++G+SH Y +S
Sbjct:  151 LSNKKKKLQRRMKIAELKQICSRPDVVEIWDATAADPKLLVYLKSYRNTVPVPRHWCQKRKFLQGKRGIEKQPFQLPDFIAATGIEKIRQAYIEKEDSKKLKQKQRERMQPKMGK-MDIDYQVLHDAFFKYQTKPKLTTLGDLYYEGKEFEVKLREMKPGMLSQELKEALGMPEGAPPPWLINMQRYGPPPSYPDLKIPGLNAPIPPGASFGYHPGGWGKPPVDEYGRPLYGDVFGVQQ---QEQANYEEEPVDKTKHWGDLEEEEEXXXXXXXXXXXXXXXMEDGIESVD-----SQSSTPTGVETPDVIDLRKQQ--------RK--EPDRPLYQVLEEKEERVAPGTLLGTSHTYVIS 492          
BLAST of Ggra3992.t1 vs. uniprot
Match: splicing factor 3B subunit 2 n=1 Tax=Dioscorea cayennensis subsp. rotundata TaxID=55577 RepID=UPI0018AF00F4 (splicing factor 3B subunit 2 n=1 Tax=Dioscorea cayennensis subsp. rotundata TaxID=55577 RepID=UPI0018AF00F4)

HSP 1 Score: 310 bits (794), Expect = 3.870e-94
Identity = 168/360 (46.67%), Postives = 233/360 (64.72%), Query Frame = 0
Query:  232 KQMSRKKQKELRRYQISILKSLTNRPEAVDAWDVTAPDPFLLVHLKTWPNSVQVPSNWRQKRKYLQNKRGMEKKAFQLPAYIADTGVGEMRSAQIEADQKKSLKQRQREKMRAKTGRGVEIDHSRLRDAFFKYQTKPRLTSHGDIYYELRELEVDGSQFRPGFLSEELRAALGVSEGDPPLWLVSMQRYGPPPGYPGLKIPGVNAPIPKGGNYGYHMGGWGKPPVDEYGRPIYGDVFG-EGLDFGRYDSRFDFDDHKKKKLWGELRKPGSKVTVAVGVDEESEGSEQEGEDHADVGQLKGAAQVPTGNVQERVLREDEHATHGESVRKGVEPGRLYTVLEDRRVSVGQNTIMGSSHVYDV 590
            K +S KK+K LRR +I+ LK + +RP+ V+ WD TA DP LLV LK++ N+V VP +W QKRK+LQ KRG+EK+ FQLP +IA TG+ ++R A IE +  K LKQ+QRE+M+ K G+ ++ID+  L DAFFKYQTKP+LT+HGD+YYE +E EV   + +PG LS+EL+ ALG+ +G PP WL++MQRYGPPP YP LKIPG+NAPIP G ++G+H GGWGKPPVDE+GRP+YGDVFG + LD   Y+     +   K K WG+L +                   + G     +  +   +  PTG     V   D      +  ++  +P  LY VLE++   +   T++G++H Y V
Sbjct:  142 KGISNKKKKLLRRMKIADLKQICSRPDVVEVWDATAADPRLLVFLKSYRNTVPVPRHWSQKRKFLQGKRGIEKQPFQLPDFIAATGIEKIRQAYIEKEDSKKLKQKQRERMQPKMGK-MDIDYQVLHDAFFKYQTKPKLTTHGDLYYEGKEFEVKLREMKPGMLSKELKEALGMPDGSPPPWLINMQRYGPPPSYPQLKIPGLNAPIPPGASFGFHPGGWGKPPVDEFGRPLYGDVFGVQQLDQPNYEE----EPVDKSKHWGDLEEEXXXXXXXXXXXXXXXXXMEAG-----IQSVDSLSSTPTG-----VETPDVIDLRKQQRKEPEKP--LYQVLEEKEERIAPGTLLGTTHTYVV 484          
BLAST of Ggra3992.t1 vs. uniprot
Match: A0A7R9Z112 (Hypothetical protein n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9Z112_9CHLO)

HSP 1 Score: 311 bits (797), Expect = 6.060e-94
Identity = 177/387 (45.74%), Postives = 228/387 (58.91%), Query Frame = 0
Query:  213 APEHANGQDAEGGKDGAQLKQMSRKKQKELRRYQISILKSLTNRPEAVDAWDVTAPDPFLLVHLKTWPNSVQVPSNWRQKRKYLQNKRGMEKKAFQLPAYIADTGVGEMRSAQIEADQKKSLKQRQREKMRAKTGRGVEIDHSRLRDAFFKYQTKPRLTSHGDIYYELRELEVDGSQFRPGFLSEELRAALGVSEGDPPLWLVSMQRYGPPPGYPGLKIPGVNAPIPKGGNYGYHMGGWGKPPVDEYGRPIYGDVFGEGLDFGRYDSRFDFDDHKKKKLWGELRKPGSKVTVAVGVDEESEGSEQEGEDHADVGQLKGAAQVPTGNVQERV-----------LREDEHATHGESVRKGVEPGRLYTVLEDRRVSVGQNTIMGSSHVY 588
            AP  A G+ ++   DG   K +S++++K L R +I+ LK L  RPE V+ WDVTAPDP LLV+LK + N+V VP +W QKRKYLQ KRG+EK  F+LP +I  TG+GEMR    E ++ K LKQ+QR++M  K GR ++ID+  L DAFFKYQT+P+L+  G+IYYE +E EV     RPG LS+ LR ALG+ E  PP WL++MQRYGPPP YP LKIPG+NAPIP G ++GY  GGWGKPPVDE G  +YGDVFG+ +D    DS  D D   K   WGEL             DEE E                G A                      +   +   +        +P +LY VLE ++ SVG  TI+G+ HVY
Sbjct:  159 APAKAGGEASDSDSDGEDKKALSKRQRKMLSRLKIAELKQLCERPEVVEVWDVTAPDPQLLVYLKAYRNTVHVPRHWSQKRKYLQGKRGIEKPPFKLPDFIEATGIGEMRQTYAEKEESKKLKQKQRDRMAPKMGR-MDIDYQILHDAFFKYQTRPKLSDMGEIYYEGKEFEVTVGNLRPGVLSDALREALGMGENTPPPWLINMQRYGPPPSYPDLKIPGLNAPIPPGCSFGYQPGGWGKPPVDEAGNAVYGDVFGQHVD--EVDSDEDVD---KASKWGELD-----------ADEEEEXXXXXXXXXXXXXXXXGTAXXXXXXXXXXXXXXXXXXXXSGIETPDTMLNLRKASDSEQPKQLYQVLEQKQASVGAGTILGTDHVY 528          
BLAST of Ggra3992.t1 vs. uniprot
Match: A0A1U7YVT3 (splicing factor 3B subunit 2-like n=2 Tax=Nelumbo nucifera TaxID=4432 RepID=A0A1U7YVT3_NELNU)

HSP 1 Score: 309 bits (791), Expect = 1.160e-93
Identity = 166/356 (46.63%), Postives = 230/356 (64.61%), Query Frame = 0
Query:  234 MSRKKQKELRRYQISILKSLTNRPEAVDAWDVTAPDPFLLVHLKTWPNSVQVPSNWRQKRKYLQNKRGMEKKAFQLPAYIADTGVGEMRSAQIEADQKKSLKQRQREKMRAKTGRGVEIDHSRLRDAFFKYQTKPRLTSHGDIYYELRELEVDGSQFRPGFLSEELRAALGVSEGDPPLWLVSMQRYGPPPGYPGLKIPGVNAPIPKGGNYGYHMGGWGKPPVDEYGRPIYGDVFG-EGLDFGRYDSRFDFDDHKKKKLWGELRKPGSKVTVAVGVDEESEGSEQEGEDHADVGQLKGAAQVPTGNVQERVLREDEHATHGESVRKGVEPGRLYTVLEDRRVSVGQNTIMGSSHVY 588
            +S KK+K  RR  I+ LK + +RP+ V+ WD TA DP LLV+LK++ N+V VP +W QKRK+LQ KRG+EK+ FQLP +IA TG+ ++R A IE +  K LKQ+QRE+M+ K G+ ++ID+  L DAFFKYQTKP+LT+HGD+Y+E +E EV   +F+PG LS+EL+ ALG+ EG PP WL++MQRYGPPP YP LKIPG+NAPIP G ++GYH GGWGKPPVDEYGRP+YGDVFG +  +   Y+     +   + K WG+L +                      E  A +  +   +  PTG     V   D      +  ++  +P  LY VLE++   +   T++G++H Y
Sbjct:  149 LSNKKKKLQRRMNIAELKQICSRPDVVEVWDATAADPKLLVYLKSYRNTVPVPRHWCQKRKFLQGKRGIEKQPFQLPDFIAATGIEKIRQAYIEKEDSKKLKQKQRERMQPKMGK-MDIDYQVLHDAFFKYQTKPKLTTHGDLYHEGKEFEVKLREFKPGLLSQELKEALGMPEGAPPPWLINMQRYGPPPSYPHLKIPGLNAPIPPGASFGYHPGGWGKPPVDEYGRPLYGDVFGVQQQELPNYEE----EPVDRSKHWGDLEEEXXXXXXXXXX------XXXXXELEAGIQSVDSLSSTPTG-----VETPDVIDLRKQQRKEPEKP--LYQVLEEKEEKIAPGTLLGTTHTY 486          
BLAST of Ggra3992.t1 vs. uniprot
Match: A0A5J4ZA33 (PSP domain-containing protein n=2 Tax=Nyssaceae TaxID=4289 RepID=A0A5J4ZA33_9ASTE)

HSP 1 Score: 310 bits (794), Expect = 1.760e-93
Identity = 166/358 (46.37%), Postives = 231/358 (64.53%), Query Frame = 0
Query:  234 MSRKKQKELRRYQISILKSLTNRPEAVDAWDVTAPDPFLLVHLKTWPNSVQVPSNWRQKRKYLQNKRGMEKKAFQLPAYIADTGVGEMRSAQIEADQKKSLKQRQREKMRAKTGRGVEIDHSRLRDAFFKYQTKPRLTSHGDIYYELRELEVDGSQFRPGFLSEELRAALGVSEGDPPLWLVSMQRYGPPPGYPGLKIPGVNAPIPKGGNYGYHMGGWGKPPVDEYGRPIYGDVFGEGLDFGRYDSRFDFDDHKKKKLWGELRKPGSKVTVAVGVDEESEGSEQEGEDHADVGQLKGAAQVPTGNVQERVLREDEHATHGESVRKGVEPGRLYTVLEDRRVSVGQNTIMGSSHVYDVS 591
            +S KK+K  RR +I+ LK + +RP+ V+ WD T+ DP LLV+LK++ N+V VP +W QKRK+LQ KRG+EK+ FQLP +IA TG+ ++R A IE +  K LKQ+QRE+M+ K G+ ++ID+  L DAFFKYQTKP+LT+HGD+Y+E +E EV   + +PG LS+EL+ ALG+ EG PP WL++MQRYGPPP YP LKIPG+NAPIP G  +GYH GGWGKPPVDEYGRP+YGDVFG  L   +    ++ +   K K WG+L +                      E  A +  +   +  PTG     V   D      +  ++  +P  LY VLE++   +   T++G++H Y +S
Sbjct:  158 ISNKKKKLQRRMKIAELKQICSRPDVVEVWDATSADPKLLVYLKSYRNTVPVPRHWCQKRKFLQGKRGIEKQPFQLPDFIAATGIEKIRQAYIEKEDSKKLKQKQRERMQPKMGK-MDIDYQVLHDAFFKYQTKPKLTTHGDLYHEGKEFEVKLREMKPGMLSQELKEALGMPEGAPPPWLINMQRYGPPPSYPHLKIPGLNAPIPPGATFGYHPGGWGKPPVDEYGRPLYGDVFGVQL---QEQPNYEEEPVDKTKHWGDLEEEXXXXXXXXXX------XXXXXELEAGIQSVDSLSSTPTG-----VETPDVIDLRKQQRKEPEKP--LYQVLEEKEEKIAPGTLLGTTHTYVIS 498          
BLAST of Ggra3992.t1 vs. uniprot
Match: A0A0U9HJV8 (Splicing factor 3B subunit 2 n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A0U9HJV8_KLENI)

HSP 1 Score: 308 bits (788), Expect = 2.600e-93
Identity = 171/350 (48.86%), Postives = 224/350 (64.00%), Query Frame = 0
Query:  242 LRRYQISILKSLTNRPEAVDAWDVTAPDPFLLVHLKTWPNSVQVPSNWRQKRKYLQNKRGMEKKAFQLPAYIADTGVGEMRSAQIEADQKKSLKQRQREKMRAKTGRGVEIDHSRLRDAFFKYQTKPRLTSHGDIYYELRELEVDGSQFRPGFLSEELRAALGVSEGDPPLWLVSMQRYGPPPGYPGLKIPGVNAPIPKGGNYGYHMGGWGKPPVDEYGRPIYGDVFGEGLDFGRYDSRFDFDDHKKKKLWGELRKPGSKVTVAVGVDEESEGSEQEGEDHADVGQLK-GAAQVPTGNVQERVLREDEHATHGESVRKGVEPGRLYTVLEDRRVSVGQNTIMGSSHVYDV 590
            L+R +I+ LK L+ RPE V+ WD TA DP LLV+LK + N+V VP +W QKRK+LQ KRG+EK  FQLP +IA+TG+ ++R A  E +  K LKQ+QRE+M+ K G+ ++ID+  L DAFFK+QTKP+LT  GD+YYE +E E   + ++PG LSEELR ALG+ E  PP WLV+MQRYGPPP YP LKIPG+NAPIP+G ++GYH GGWGKPPV+EYG+PIYGDVFG        +  F+ +   + K WGEL               E  G ++E        Q++ G A V T +     L   +      ++RKG     LY VLE R   V +  +MGSSH Y V
Sbjct:  150 LKRLKIAELKQLSRRPETVEIWDTTAMDPKLLVYLKAYRNTVPVPRHWSQKRKFLQGKRGIEKIPFQLPDFIANTGIEKIRQAYQEKEDSKKLKQKQRERMQPKMGK-LDIDYQVLHDAFFKHQTKPKLTGQGDLYYEGKEYERKMNDYKPGELSEELREALGMDEQSPPPWLVNMQRYGPPPSYPSLKIPGLNAPIPEGASFGYHPGGWGKPPVNEYGQPIYGDVFGTTKKDVE-EEVFEDEPVDRSKHWGELESDEXXXXXXXXXXXEDAGMDEE--------QMQAGMASVDTVSTTPAGLETPDLI----NLRKGQPEKPLYQVLEQREGRVAEGELMGSSHTYAV 485          
BLAST of Ggra3992.t1 vs. uniprot
Match: A0A8B8P4Z3 (splicing factor 3B subunit 2 n=3 Tax=Myrtoideae TaxID=1699513 RepID=A0A8B8P4Z3_9MYRT)

HSP 1 Score: 308 bits (788), Expect = 4.090e-93
Identity = 172/374 (45.99%), Postives = 234/374 (62.57%), Query Frame = 0
Query:  234 MSRKKQKELRRYQISILKSLTNRPEAVDAWDVTAPDPFLLVHLKTWPNSVQVPSNWRQKRKYLQNKRGMEKKAFQLPAYIADTGVGEMRSAQIEADQKKSLKQRQREKMRAKTGRGVEIDHSRLRDAFFKYQTKPRLTSHGDIYYELRELEVDGSQFRPGFLSEELRAALGVSEGDPPLWLVSMQRYGPPPGYPGLKIPGVNAPIPKGGNYGYHMGGWGKPPVDEYGRPIYGDVFGEGLDFGRYDSRFDFDDHKKKKLWGELRKPGSKVTVAVGVDEESEGSEQEGEDHADVGQLKGAAQVPTGNVQERVLREDEHATHGESVRKGVEPGRLYTVLEDRRVSVGQNTIMGSSHVYDVSKNVGANADSSREKVSD 607
            +S KK+K  RR +I+ LK + +RP+ V+ WD TA DP LLV LK++ N+V VP +W QKRK+LQ KRG+EK+ FQLP +IA TG+ ++R A IE +  K LKQ+QRE+M+ K G+ ++ID+  L DAFFKYQTKP+LT+HGD+Y+E +E EV   + +PG LS EL+ ALG+ EG PP WL++MQRYGPPP YP LKIPG+NAPIP G ++GYH GGWGKPPVDE+GRP+YGDVFG      +    ++ +   K K WG+L +                   + G +  D       +  PTG     V   D      +  ++   P  LYTVLE++   +   T++G+SH Y V  N G   D +  K  D
Sbjct:  156 VSNKKKKLQRRMKIAELKQICSRPDVVEIWDATAADPKLLVFLKSYRNTVPVPRHWCQKRKFLQGKRGIEKQPFQLPDFIAATGIEKIRQAYIEKEDSKKLKQKQRERMQPKMGK-MDIDYQVLHDAFFKYQTKPKLTTHGDLYFEGKEFEVKLREMKPGMLSHELKEALGMPEGAPPPWLINMQRYGPPPSYPQLKIPGLNAPIPPGASFGYHPGGWGKPPVDEFGRPLYGDVFGVQQ---QEQPNYEEEPLDKTKHWGDLEEEEXXXXXXXXXXXXXXXXLEAGIESVD-----SLSSTPTG-----VETPDVIDLRKQQRKEADRP--LYTVLEEKEEKIAPGTLLGTSHTYVV--NTGGTQDKAGAKRVD 511          
BLAST of Ggra3992.t1 vs. uniprot
Match: A0A2U1L5X0 (PSP domain-containing protein n=1 Tax=Artemisia annua TaxID=35608 RepID=A0A2U1L5X0_ARTAN)

HSP 1 Score: 307 bits (786), Expect = 4.850e-93
Identity = 166/355 (46.76%), Postives = 229/355 (64.51%), Query Frame = 0
Query:  234 MSRKKQKELRRYQISILKSLTNRPEAVDAWDVTAPDPFLLVHLKTWPNSVQVPSNWRQKRKYLQNKRGMEKKAFQLPAYIADTGVGEMRSAQIEADQKKSLKQRQREKMRAKTGRGVEIDHSRLRDAFFKYQTKPRLTSHGDIYYELRELEVDGSQFRPGFLSEELRAALGVSEGDPPLWLVSMQRYGPPPGYPGLKIPGVNAPIPKGGNYGYHMGGWGKPPVDEYGRPIYGDVFGEGLDFGRYDSRFDFDDHKKKKLWGELRKPGSKVTVAVGVDEESEGSEQEGEDHADVGQLKGAAQVPTGNVQERVLREDEHATHGESVRKGVEPGRLYTVLEDRRVSVGQNTIMGSSHVY 588
            +S KK+K  RR +I+ LK +++RP+ V+ WD T+ DP LLV LK++ N+V VP +W QKRK+LQ KRG+EK+ FQLP +IA TG+ ++R A IE +  K LKQ+QRE+M+ K G+ ++ID+  L DAFFKYQTKP+LTSHGD+Y+E +E EV   + +PG LS EL+ ALG+ EG PP WL++MQRYGPPP YP LKIPG+NAPIP G ++GYH GGWGKPPVDE+GRP+YGDVFG+  +   Y+     +   K K WG+L +                  E E      +  +   +  PTG     V   D      +  ++  +P  LY VLE++   +   T++G+SH Y
Sbjct:  138 ISNKKKKLQRRMKIAELKQISSRPDVVEVWDATSADPKLLVFLKSYRNTVPVPRHWCQKRKFLQGKRGIEKQPFQLPDFIAATGIEKIRQAYIEKEDNKKLKQKQRERMQPKMGK-MDIDYQVLHDAFFKYQTKPKLTSHGDLYHEGKEFEVKLREMKPGSLSHELKEALGMPEGAPPPWLINMQRYGPPPSYPHLKIPGLNAPIPLGASFGYHPGGWGKPPVDEFGRPVYGDVFGQQEEPPSYEE----EPIDKSKHWGDLEEEXXXXXXXXXXXXXXXXXELED----GIQSVDSFSSTPTG-----VETPDVIDLRKQQRKEPEKP--LYQVLEEKEEKIAPGTLLGTSHTY 476          
The following BLAST results are available for this feature:
BLAST of Ggra3992.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3ISR91.060e-21064.68Splicing factor 3B subunit 2 n=1 Tax=Gracilariopsi... [more]
R7QGY81.650e-15161.06PSP domain-containing protein n=1 Tax=Chondrus cri... [more]
A0A0A0LMT11.640e-9447.92PSP domain-containing protein n=12 Tax=Cucurbitace... [more]
splicing factor 3B subunit 2 n=1 Tax=Dioscorea cayennensis subsp. rotundata TaxID=55577 RepID=UPI0018AF00F43.870e-9446.67splicing factor 3B subunit 2 n=1 Tax=Dioscorea cay... [more]
A0A7R9Z1126.060e-9445.74Hypothetical protein n=1 Tax=Chlamydomonas euryale... [more]
A0A1U7YVT31.160e-9346.63splicing factor 3B subunit 2-like n=2 Tax=Nelumbo ... [more]
A0A5J4ZA331.760e-9346.37PSP domain-containing protein n=2 Tax=Nyssaceae Ta... [more]
A0A0U9HJV82.600e-9348.86Splicing factor 3B subunit 2 n=1 Tax=Klebsormidium... [more]
A0A8B8P4Z34.090e-9345.99splicing factor 3B subunit 2 n=3 Tax=Myrtoideae Ta... [more]
A0A2U1L5X04.850e-9346.76PSP domain-containing protein n=1 Tax=Artemisia an... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 66..86
NoneNo IPR availableCOILSCoilCoilcoord: 321..341
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 590..629
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 63..92
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 38..62
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 98..112
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 601..623
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 508..533
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 38..238
NoneNo IPR availablePANTHERPTHR12785:SF6SPLICING FACTOR 3B SUBUNIT 2coord: 74..597
NoneNo IPR availablePANTHERPTHR12785SPLICING FACTOR 3Bcoord: 74..597
IPR006568PSP, proline-richSMARTSM00581testneucoord: 387..440
e-value: 6.3E-24
score: 95.5
IPR006568PSP, proline-richPFAMPF04046PSPcoord: 391..436
e-value: 2.7E-20
score: 72.0
IPR007180Domain of unknown function DUF382PFAMPF04037DUF382coord: 256..382
e-value: 1.7E-47
score: 160.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000908_piloncontigtig00000908_pilon:300373..302262 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra3992.t1Ggra3992.t1Gracilaria gracilis GNS1m malemRNAtig00000908_pilon 300373..302262 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra3992.t1 ID=Ggra3992.t1|Name=Ggra3992.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=630bp
MVPHADDLEAAKAAALRDLLSSAGADILQAADTAVELTEQTESDSNKVGG
NAEIQQNKDLSEKQAFADLKQERKDSNNESDAAAREARESQTKRSQIQPQ
KRTRRRRRPKSRTHQTPIEPSDEDEDDTDDAVEYVPEQIAVLDDAQQLAK
LDGADRSGDADNIDQVISSMRRFMQRGIPDEDAQPEQPNEDDANASKSEE
NALQTNGRAHVRAPEHANGQDAEGGKDGAQLKQMSRKKQKELRRYQISIL
KSLTNRPEAVDAWDVTAPDPFLLVHLKTWPNSVQVPSNWRQKRKYLQNKR
GMEKKAFQLPAYIADTGVGEMRSAQIEADQKKSLKQRQREKMRAKTGRGV
EIDHSRLRDAFFKYQTKPRLTSHGDIYYELRELEVDGSQFRPGFLSEELR
AALGVSEGDPPLWLVSMQRYGPPPGYPGLKIPGVNAPIPKGGNYGYHMGG
WGKPPVDEYGRPIYGDVFGEGLDFGRYDSRFDFDDHKKKKLWGELRKPGS
KVTVAVGVDEESEGSEQEGEDHADVGQLKGAAQVPTGNVQERVLREDEHA
THGESVRKGVEPGRLYTVLEDRRVSVGQNTIMGSSHVYDVSKNVGANADS
SREKVSDKRQRDGGEERRDVPVKRSKFKF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006568PSP_pro-rich
IPR007180DUF382