Ggra3977.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra3977.t1
Unique NameGgra3977.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length411
Homology
BLAST of Ggra3977.t1 vs. uniprot
Match: A0A2V3IVL7 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IVL7_9FLOR)

HSP 1 Score: 371 bits (952), Expect = 8.440e-123
Identity = 226/440 (51.36%), Postives = 285/440 (64.77%), Query Frame = 0
Query:    1 MPTARHFSTKSIKLLADDINSNFAETTVDNFLNTLAKIDSQIHQEFNVLKNDLSVAHLQVEEANSRCKALQLDNEAYTTKIAQLSAKLATITVTHSVPPPSTPLPAXXXXXKCTCAAAD----------------GDHQPSCALMHAILATSNPQRLVQLLLAREKAYRNQHALVQRLKLDNTELRSTYDNLWTRYQNLHQKDNHGDN-----NIEHLSVRLQNAGRQACDVATHVEKRLQITAQNINNFRQSVTFRPKVSQDPKQP---IIDEYEQDSDNETELNVTACAAAADELIATLAAQKVAHDRLKSTVMELTKELEQGVEKRQQEANQVKXXXXXXXXXXXXXXXXXXXXDSEISDLKKQLTKVLAEYEAISVAHSYSNAELSRIRATNRAKTKERQLLDRNDRHD------RPHALMNASENRLHHRKIHFR 410
            MP   HFSTKSIKLLADDI+SNFA  +VD+FL TLA IDSQIHQ+FNV K+DL+ +   ++ AN++C ALQLDN  Y  +++ L ++L ++  +     P  P         C+CA AD                 DH PSCAL  A LA   P RLVQLL+ARE+A+ NQ ALV RLKLDN +L++TY+NL TRYQ   QK +   N     NI  LS ++Q+AG+ AC VA+ VE+RLQITA+N+  FRQSV      +  P Q    I DEY+ +SD E + + TAC AAAD+LI+TLAAQKVAH+RL++TV++LT ELE   + ++ +   +                     DS+I+DLKKQL KVLAEY+AISVAHSYSNAELSRIRA NRAKTK+RQ    NDRH       RPH L+N +ENRLHHRKIHFR
Sbjct:    1 MPPHTHFSTKSIKLLADDIHSNFAAASVDHFLTTLANIDSQIHQQFNVFKSDLAASQAALQAANAKCDALQLDNVRYKAQLSALQSELCSVQPSKQPHQPPEP---------CSCATADPSAPAPPKNRLHTGLAADHLPSCALRIAALANCTPHRLVQLLIARERAFTNQQALVHRLKLDNADLKTTYNNLLTRYQ---QKQHSASNALPAHNIHRLSQQIQHAGQTACQVASEVEQRLQITARNLTTFRQSVAPSAPSAPPPTQSTHRIKDEYDNESDAEHDSHATACVAAADQLISTLAAQKVAHERLRNTVVQLTSELESVAQNKKNDTQLLSEKLSTTHSKLAEK-------DSQIADLKKQLNKVLAEYQAISVAHSYSNAELSRIRANNRAKTKDRQF---NDRHXXXXXXXRPHGLINGAENRLHHRKIHFR 418          
BLAST of Ggra3977.t1 vs. uniprot
Match: R7QD43 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QD43_CHOCR)

HSP 1 Score: 181 bits (459), Expect = 2.320e-48
Identity = 172/487 (35.32%), Postives = 233/487 (47.84%), Query Frame = 0
Query:    3 TARHFSTKSIKLLADDINSNFAETTVDNFLNTLAKIDSQIHQEFNVLKNDLSVAHLQVEEANS-------RCKALQLDNEAYTTKIAQLSAKLA-------------TITVTHSVPPPSTPLPAXXXXXKCTCAAA----DG----DHQPSCALMHAILATSNPQRLVQLLLAREKAYRNQHALVQRLKLDNTELRSTYDNLWTRYQNLHQ-KDNHG-------DNNIEHLSVRLQNAGRQACDVATHVEKRLQITAQNINNFRQ--------------------------SVTFRPKVSQDPKQP-----IIDEYEQDSDNETELNVTACA-----AAADELIATLAAQKVAHDRLKSTVMELTKELE-------QGVEKRQQEANQVKXXXXXXXXXXXXXXXXXXXXDSEISDLKKQLTKVLAEYEAISVAHSYSNAELSRIRATNRAKTKERQLLDRNDRHDRPHALMNASENRLHHRKIHFR 410
            ++R FST SIKL+AD++ S  +  +V+  L  L  ID QI  +F  LK DLS A  ++  A S       R   +Q   +A    IA L  +L               +T   S    +   P       C CA      DG    +H+PSC L  A+LA  +P+ L  +L ARE AYR Q  LV+RLK DN EL  TY+ L  RYQ   Q +   G       D +I+H+S R+Q AG  AC VA+H+E+RL ++A++  + +                            ++     SQD ++      ++DEYE DS + TEL+          AA  EL+ TLA Q+ AHD L+ TV+ELTKELE       + + K + E    +               XXXXX             VLAEYEA+S+AHSYSNAELS+IRA  R    +RQ  DR     R HA+ +  EN LHHR+ HFR
Sbjct:   18 SSRPFSTASIKLVADELTST-SSPSVEAVLQKLLHIDGQIDADFKSLKKDLSQALHEISHARSELMRESNRRAEIQHRADAKDETIASLRKELKMAKEAHQNSMAKEALTARKSDAASNRSRPGKSSFGLCKCAGGKENIDGLPGIEHEPSCELKKAVLAEMDPKSLCDILTAREGAYRAQSVLVERLKRDNKELMDTYEKLLARYQAKEQARSARGTKQRMSMDEHIKHISFRVQQAGEAACVVASHIERRLSVSARDAKSVQSISGHSGKGVDVRCTGAGNHQSDRRFADISATTTSSQDKRKQAESFTVVDEYENDSLS-TELDCVRRENDRFDAAGKELLRTLAIQQQAHDCLRGTVLELTKELERIEPQKIEEMRKCRHEVEVAQKRVAVFGGELKKAKKXXXXXXXXXXXXXXXXXXVLAEYEAVSIAHSYSNAELSKIRAKTRH---DRQTNDRPPL--RGHAVNHGVENLLHHRRNHFR 497          
The following BLAST results are available for this feature:
BLAST of Ggra3977.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IVL78.440e-12351.36Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QD432.320e-4835.32Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 284..343
NoneNo IPR availableCOILSCoilCoilcoord: 60..87

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000908_piloncontigtig00000908_pilon:269113..270345 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra3977.t1Ggra3977.t1Gracilaria gracilis GNS1m malemRNAtig00000908_pilon 269113..270345 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra3977.t1 ID=Ggra3977.t1|Name=Ggra3977.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=411bp
MPTARHFSTKSIKLLADDINSNFAETTVDNFLNTLAKIDSQIHQEFNVLK
NDLSVAHLQVEEANSRCKALQLDNEAYTTKIAQLSAKLATITVTHSVPPP
STPLPASAAAVKCTCAAADGDHQPSCALMHAILATSNPQRLVQLLLAREK
AYRNQHALVQRLKLDNTELRSTYDNLWTRYQNLHQKDNHGDNNIEHLSVR
LQNAGRQACDVATHVEKRLQITAQNINNFRQSVTFRPKVSQDPKQPIIDE
YEQDSDNETELNVTACAAAADELIATLAAQKVAHDRLKSTVMELTKELEQ
GVEKRQQEANQVKQKLDKADNKLKSAHNDIKHKDSEISDLKKQLTKVLAE
YEAISVAHSYSNAELSRIRATNRAKTKERQLLDRNDRHDRPHALMNASEN
RLHHRKIHFR*
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