Ggra3977.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra3977.t1
Unique NameGgra3977.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length411
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000908_piloncontigtig00000908_pilon:269113..270345 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra3977Ggra3977Gracilaria gracilis GNS1m malegenetig00000908_pilon 269113..270345 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3977.t1.stop1Ggra3977.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000908_pilon 269113..269115 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3977.t1.CDS1Ggra3977.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000908_pilon 269113..270345 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3977.t1.exon1Ggra3977.t1.exon1Gracilaria gracilis GNS1m maleexontig00000908_pilon 269113..270345 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3977.t1.start1Ggra3977.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000908_pilon 270343..270345 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3977.t1Ggra3977.t1Gracilaria gracilis GNS1m malepolypeptidetig00000908_pilon 269113..270345 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra3977.t1 ID=Ggra3977.t1|Name=Ggra3977.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=411bp
MPTARHFSTKSIKLLADDINSNFAETTVDNFLNTLAKIDSQIHQEFNVLK
NDLSVAHLQVEEANSRCKALQLDNEAYTTKIAQLSAKLATITVTHSVPPP
STPLPASAAAVKCTCAAADGDHQPSCALMHAILATSNPQRLVQLLLAREK
AYRNQHALVQRLKLDNTELRSTYDNLWTRYQNLHQKDNHGDNNIEHLSVR
LQNAGRQACDVATHVEKRLQITAQNINNFRQSVTFRPKVSQDPKQPIIDE
YEQDSDNETELNVTACAAAADELIATLAAQKVAHDRLKSTVMELTKELEQ
GVEKRQQEANQVKQKLDKADNKLKSAHNDIKHKDSEISDLKKQLTKVLAE
YEAISVAHSYSNAELSRIRATNRAKTKERQLLDRNDRHDRPHALMNASEN
RLHHRKIHFR*
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spliced messenger RNA

>Ggra3977.t1 ID=Ggra3977.t1|Name=Ggra3977.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1233bp|location=Sequence derived from alignment at tig00000908_pilon:269113..270345- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGCCTACCGCTAGACATTTTTCCACCAAGTCCATCAAACTTCTTGCGGA
CGACATCAATTCAAACTTTGCGGAGACCACTGTCGACAACTTTCTCAATA
CTCTCGCAAAGATCGATTCTCAAATTCATCAAGAATTCAATGTGCTAAAG
AACGATCTCTCCGTTGCCCATCTTCAAGTAGAAGAAGCCAATTCTCGCTG
CAAAGCGTTGCAACTTGATAATGAAGCGTATACCACGAAAATTGCGCAAC
TCTCGGCAAAGCTTGCGACGATTACCGTTACCCACTCTGTTCCGCCGCCT
TCCACGCCGCTACCTGCCTCTGCTGCCGCTGTTAAGTGTACTTGCGCCGC
TGCGGACGGTGATCATCAACCGTCTTGCGCATTAATGCATGCTATCTTGG
CTACTTCTAACCCGCAACGATTGGTACAACTTCTATTGGCGAGAGAGAAG
GCTTATCGTAATCAGCACGCACTCGTCCAACGTCTCAAACTAGACAACAC
TGAACTGCGAAGCACGTATGACAATCTGTGGACACGCTATCAAAACCTCC
ACCAGAAGGACAACCATGGCGACAATAACATTGAACATTTGTCAGTACGC
CTTCAGAACGCCGGCCGACAGGCTTGTGATGTTGCAACTCATGTTGAGAA
ACGGCTTCAAATCACCGCTCAGAATATCAACAACTTTCGTCAGTCTGTCA
CATTCCGCCCTAAAGTCTCCCAAGACCCCAAGCAACCTATCATAGATGAA
TACGAACAGGACTCGGACAATGAAACAGAACTCAATGTCACGGCGTGTGC
TGCGGCAGCTGATGAACTTATTGCCACTCTAGCAGCCCAGAAAGTGGCTC
ATGATCGTCTGAAAAGCACCGTGATGGAACTGACCAAGGAATTGGAACAG
GGCGTTGAAAAACGGCAACAGGAGGCCAATCAGGTTAAACAGAAGCTTGA
TAAAGCTGATAACAAGCTGAAGAGCGCTCACAATGACATCAAGCACAAGG
ACTCTGAAATCAGTGATTTGAAGAAGCAACTTACAAAGGTGCTTGCTGAG
TATGAGGCTATATCTGTGGCTCACTCCTACTCGAACGCTGAGTTGTCCAG
GATCAGGGCCACCAATCGGGCCAAGACAAAGGAGCGCCAGTTGCTGGATA
GAAACGATCGCCATGATCGGCCTCACGCACTTATGAACGCATCGGAGAAT
CGCCTTCATCATCGCAAGATCCACTTCAGATGA
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protein sequence of Ggra3977.t1

>Ggra3977.t1 ID=Ggra3977.t1|Name=Ggra3977.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=411bp
MPTARHFSTKSIKLLADDINSNFAETTVDNFLNTLAKIDSQIHQEFNVLK
NDLSVAHLQVEEANSRCKALQLDNEAYTTKIAQLSAKLATITVTHSVPPP
STPLPASAAAVKCTCAAADGDHQPSCALMHAILATSNPQRLVQLLLAREK
AYRNQHALVQRLKLDNTELRSTYDNLWTRYQNLHQKDNHGDNNIEHLSVR
LQNAGRQACDVATHVEKRLQITAQNINNFRQSVTFRPKVSQDPKQPIIDE
YEQDSDNETELNVTACAAAADELIATLAAQKVAHDRLKSTVMELTKELEQ
GVEKRQQEANQVKQKLDKADNKLKSAHNDIKHKDSEISDLKKQLTKVLAE
YEAISVAHSYSNAELSRIRATNRAKTKERQLLDRNDRHDRPHALMNASEN
RLHHRKIHFR*
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mRNA from alignment at tig00000908_pilon:269113..270345-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra3977.t1 ID=Ggra3977.t1|Name=Ggra3977.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1233bp|location=Sequence derived from alignment at tig00000908_pilon:269113..270345- (Gracilaria gracilis GNS1m male)
ATGCCTACCGCTAGACATTTTTCCACCAAGTCCATCAAACTTCTTGCGGA
CGACATCAATTCAAACTTTGCGGAGACCACTGTCGACAACTTTCTCAATA
CTCTCGCAAAGATCGATTCTCAAATTCATCAAGAATTCAATGTGCTAAAG
AACGATCTCTCCGTTGCCCATCTTCAAGTAGAAGAAGCCAATTCTCGCTG
CAAAGCGTTGCAACTTGATAATGAAGCGTATACCACGAAAATTGCGCAAC
TCTCGGCAAAGCTTGCGACGATTACCGTTACCCACTCTGTTCCGCCGCCT
TCCACGCCGCTACCTGCCTCTGCTGCCGCTGTTAAGTGTACTTGCGCCGC
TGCGGACGGTGATCATCAACCGTCTTGCGCATTAATGCATGCTATCTTGG
CTACTTCTAACCCGCAACGATTGGTACAACTTCTATTGGCGAGAGAGAAG
GCTTATCGTAATCAGCACGCACTCGTCCAACGTCTCAAACTAGACAACAC
TGAACTGCGAAGCACGTATGACAATCTGTGGACACGCTATCAAAACCTCC
ACCAGAAGGACAACCATGGCGACAATAACATTGAACATTTGTCAGTACGC
CTTCAGAACGCCGGCCGACAGGCTTGTGATGTTGCAACTCATGTTGAGAA
ACGGCTTCAAATCACCGCTCAGAATATCAACAACTTTCGTCAGTCTGTCA
CATTCCGCCCTAAAGTCTCCCAAGACCCCAAGCAACCTATCATAGATGAA
TACGAACAGGACTCGGACAATGAAACAGAACTCAATGTCACGGCGTGTGC
TGCGGCAGCTGATGAACTTATTGCCACTCTAGCAGCCCAGAAAGTGGCTC
ATGATCGTCTGAAAAGCACCGTGATGGAACTGACCAAGGAATTGGAACAG
GGCGTTGAAAAACGGCAACAGGAGGCCAATCAGGTTAAACAGAAGCTTGA
TAAAGCTGATAACAAGCTGAAGAGCGCTCACAATGACATCAAGCACAAGG
ACTCTGAAATCAGTGATTTGAAGAAGCAACTTACAAAGGTGCTTGCTGAG
TATGAGGCTATATCTGTGGCTCACTCCTACTCGAACGCTGAGTTGTCCAG
GATCAGGGCCACCAATCGGGCCAAGACAAAGGAGCGCCAGTTGCTGGATA
GAAACGATCGCCATGATCGGCCTCACGCACTTATGAACGCATCGGAGAAT
CGCCTTCATCATCGCAAGATCCACTTCAGATGA
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Coding sequence (CDS) from alignment at tig00000908_pilon:269113..270345-

>Ggra3977.t1 ID=Ggra3977.t1|Name=Ggra3977.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1233bp|location=Sequence derived from alignment at tig00000908_pilon:269113..270345- (Gracilaria gracilis GNS1m male)
ATGCCTACCGCTAGACATTTTTCCACCAAGTCCATCAAACTTCTTGCGGA
CGACATCAATTCAAACTTTGCGGAGACCACTGTCGACAACTTTCTCAATA
CTCTCGCAAAGATCGATTCTCAAATTCATCAAGAATTCAATGTGCTAAAG
AACGATCTCTCCGTTGCCCATCTTCAAGTAGAAGAAGCCAATTCTCGCTG
CAAAGCGTTGCAACTTGATAATGAAGCGTATACCACGAAAATTGCGCAAC
TCTCGGCAAAGCTTGCGACGATTACCGTTACCCACTCTGTTCCGCCGCCT
TCCACGCCGCTACCTGCCTCTGCTGCCGCTGTTAAGTGTACTTGCGCCGC
TGCGGACGGTGATCATCAACCGTCTTGCGCATTAATGCATGCTATCTTGG
CTACTTCTAACCCGCAACGATTGGTACAACTTCTATTGGCGAGAGAGAAG
GCTTATCGTAATCAGCACGCACTCGTCCAACGTCTCAAACTAGACAACAC
TGAACTGCGAAGCACGTATGACAATCTGTGGACACGCTATCAAAACCTCC
ACCAGAAGGACAACCATGGCGACAATAACATTGAACATTTGTCAGTACGC
CTTCAGAACGCCGGCCGACAGGCTTGTGATGTTGCAACTCATGTTGAGAA
ACGGCTTCAAATCACCGCTCAGAATATCAACAACTTTCGTCAGTCTGTCA
CATTCCGCCCTAAAGTCTCCCAAGACCCCAAGCAACCTATCATAGATGAA
TACGAACAGGACTCGGACAATGAAACAGAACTCAATGTCACGGCGTGTGC
TGCGGCAGCTGATGAACTTATTGCCACTCTAGCAGCCCAGAAAGTGGCTC
ATGATCGTCTGAAAAGCACCGTGATGGAACTGACCAAGGAATTGGAACAG
GGCGTTGAAAAACGGCAACAGGAGGCCAATCAGGTTAAACAGAAGCTTGA
TAAAGCTGATAACAAGCTGAAGAGCGCTCACAATGACATCAAGCACAAGG
ACTCTGAAATCAGTGATTTGAAGAAGCAACTTACAAAGGTGCTTGCTGAG
TATGAGGCTATATCTGTGGCTCACTCCTACTCGAACGCTGAGTTGTCCAG
GATCAGGGCCACCAATCGGGCCAAGACAAAGGAGCGCCAGTTGCTGGATA
GAAACGATCGCCATGATCGGCCTCACGCACTTATGAACGCATCGGAGAAT
CGCCTTCATCATCGCAAGATCCACTTCAGATGA
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