Ggra3964.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra3964.t1
Unique NameGgra3964.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length374
Homology
BLAST of Ggra3964.t1 vs. uniprot
Match: A0A2V3IPZ5 (Phycobilisome 31.8 kDa linker polypeptide, phycoerythrin-associated, rod n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IPZ5_9FLOR)

HSP 1 Score: 619 bits (1596), Expect = 6.680e-222
Identity = 318/373 (85.25%), Postives = 342/373 (91.69%), Query Frame = 0
Query:    1 MAFVPVLSLRPASAPLASSFAGSSLRSAAPAAPSRFTARLGTVLGNSSLDKLGLDKFTERFVVEEAGRPAGFSAEYEVYIQAIYRQVFGNAYIMESEREEMKKFESEFRDLRLTVKDFCRALGKTYQYRKRFFDGRPLYGAIELNFKHFLGRTPDGLEQYRAKSAVYDASGYDAFIDAFFDDGXXXXXXXEYRVPYYRGHLTTSRLSMCAFTHMFQVVRGASTSDKANPRTMTNKITLNRAGIQSIPLAVVAPGADGCTFLAPDASSGSWQNGVSGLTMARTSHGTRQQDGKMFRIEVTRLSQQGATNGAAGVTLRSRSGRFYKTKNASSGSKLSDFRRANAVYLVPFSELSDTYVKIHKNGGVIASITPVTG 373
            MAFVPVL LRP++APL+++F G+SLR++AP+A  RFTARLGTVLGNSSLDKLGLDKFTERFV+ EAGRPAGFSA+YEVYIQAIYRQVFGNAYIMESER EM K ESEFRDLRLT K+FCRALGKTYQYRKRFFD RPLYGAIELNFKHFLGRTPDGLEQYRAKSAVYD+ GYDAFIDAFFDDG XXXXX +Y VPYYRGHLTTS LSMCAFTHMFQVVRG+STSDKANPRTMTNKITLNRAGIQSIPL VVAPGADG  F+ PDASSGSWQ GVSG +MARTSHGTRQ  GK+FRIEVT LSQ  A NG AGV LRSR+GRFYKTKNASSGSK+SDFRR+N VY+VPF+ELS TY+KIHKNGGVIASITPVTG
Sbjct:    1 MAFVPVLGLRPSAAPLSTTFTGTSLRTSAPSAQPRFTARLGTVLGNSSLDKLGLDKFTERFVIAEAGRPAGFSADYEVYIQAIYRQVFGNAYIMESERAEMSKLESEFRDLRLTAKEFCRALGKTYQYRKRFFDSRPLYGAIELNFKHFLGRTPDGLEQYRAKSAVYDSHGYDAFIDAFFDDGEXXXXXDQYCVPYYRGHLTTSNLSMCAFTHMFQVVRGSSTSDKANPRTMTNKITLNRAGIQSIPLPVVAPGADGGNFMPPDASSGSWQGGVSGASMARTSHGTRQAGGKIFRIEVTNLSQAKANNGGAGVRLRSRTGRFYKTKNASSGSKISDFRRSNTVYMVPFNELSATYIKIHKNGGVIASITPVTG 373          
BLAST of Ggra3964.t1 vs. uniprot
Match: A0A291FEB2 (LR1 n=1 Tax=Griffithsia pacifica TaxID=35689 RepID=A0A291FEB2_GRIPA)

HSP 1 Score: 528 bits (1359), Expect = 7.400e-186
Identity = 275/372 (73.92%), Postives = 305/372 (81.99%), Query Frame = 0
Query:    1 MAFVPVLSLRPA-SAPLASSFAGSSLRSAAPAAPSRFTARLGTVLGNSSLDKLGLDKFTERFVVEEAGRPAGFSAEYEVYIQAIYRQVFGNAYIMESEREEMKKFESEFRDLRLTVKDFCRALGKTYQYRKRFFDGRPLYGAIELNFKHFLGRTPDGLEQYRAKSAVYDASGYDAFIDAFFDDGXXXXXXXEYRVPYYRGHLTTSRLSMCAFTHMFQVVRGASTSDKANPRTMTNKITLNRAGIQSIPLAVVAPGADGCTFLAPDASSGSWQNGVSGLTMARTSHGTRQQDGKMFRIEVTRLSQQGATNGAAGVTLRSRSGRFYKTKNASSGSKLSDFRRANAVYLVPFSELSDTYVKIHKNGGVIASITPV 371
            MAFVP+++LRPA SAP  SSF+G  L  A  + P+   ARLGTVLGNSSLDKLGLDKF +RF V EAGRP GFSA+YEV I+A Y Q+F NAYIMESER EM K ESEFRD R TVK+FCRAL K+YQYRKRFFDGRPLYGAIEL FKH LGRTPDGLE YRAKSAVYD  GY+AFIDAFFDDG        Y VP+YRGHLTTS LSM AFTHMFQVVRG+STSDKANPRTMTN+ITLN+AGIQSIPLAVVAPGADG TFLAPDAS+GSWQ G SG T ARTSHG+RQ+ GKMFRIEV   +Q  A  G +G+ L+SRSG+FYK +N +  +K+S FRRAN VYLVPF ELS TY+KIHKNGG IASITPV
Sbjct:    1 MAFVPIVNLRPALSAPSTSSFSGVRLADAPTSTPAPVVARLGTVLGNSSLDKLGLDKFVDRFEVNEAGRPDGFSADYEVIIRACYMQIFANAYIMESERAEMAKAESEFRDGRFTVKEFCRALAKSYQYRKRFFDGRPLYGAIELCFKHILGRTPDGLEHYRAKSAVYDTKGYEAFIDAFFDDGEYDAFYDSYCVPFYRGHLTTSNLSMAAFTHMFQVVRGSSTSDKANPRTMTNQITLNQAGIQSIPLAVVAPGADGATFLAPDASAGSWQTGFSGATKARTSHGSRQEKGKMFRIEVANNTQYSAVGGGSGIKLQSRSGKFYKMRNMAP-AKVSTFRRANNVYLVPFDELSATYIKIHKNGGSIASITPV 371          
BLAST of Ggra3964.t1 vs. uniprot
Match: R7QC84 (Phycobilisome 31.8kD linker polypeptide n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QC84_CHOCR)

HSP 1 Score: 521 bits (1343), Expect = 2.410e-183
Identity = 272/378 (71.96%), Postives = 307/378 (81.22%), Query Frame = 0
Query:    1 MAFVPVLSLRPASA--PLASSFAGSSLRSAAPAA-PSRFTARLGTVLGNSSLDKLGLDKFT-ERFVVEEAGRPAGFSAEYEVYIQAIYRQVFGNAYIMESEREEMKKFESEFRDLRLTVKDFCRALGKTYQYRKRFFDGRPLYGAIELNFKHFLGRTPDGLEQYRAKSAVYDASGYDAFIDAFFDDGXXXXXXX-EYRVPYYRGHLTTSRLSMCAFTHMFQVVRGASTSDKANPRTMTNKITLNRAGIQSIPLAVVAPGADGCTFLAPDASSGSWQNGVSGLTMARTSHGTRQQDGKMFRIEVTRLSQQGATNGAAGVTLRSRSGRFYKTKNASSGSKLSDFRRANAVYLVPFSELSDTYVKIHKNGGVIASITPVTG 373
            MAFVP++ LRPA+A  P  +SF G++L   APA  PSRF ARLGTV GNSSLDKLGL++F  ER+ V +  RP GFS +YEV +Q  YRQ+FGNAYIMESER EM K ESEFRD R TVK+FCR L KTYQYR+RFFD RPLYGAIELNFKHFLGRTPDGLE+YR KSAVYD+ GYDAFIDAFFDD         E+ VP+YRGHLT+S LSMCAFTHMFQVVRGASTSDK+NP  MTN+I LN+AGIQSIPLAV+APG+DGCTF +PDAS+GSWQ G SG TMAR+ HGTR   GKMFRIEV   SQ GATNG AGV+LRSRSG+FYKT+N S  ++ SDFR  N VYLVPF+ELS TYV IHKNGG IASITP+TG
Sbjct:    1 MAFVPIVGLRPAAATRPFVTSFTGTALT--APAVTPSRFVARLGTVAGNSSLDKLGLERFQKERYAVPDPTRPVGFSMDYEVIMQGTYRQIFGNAYIMESERAEMAKLESEFRDGRYTVKEFCRVLAKTYQYRRRFFDSRPLYGAIELNFKHFLGRTPDGLEEYRRKSAVYDSEGYDAFIDAFFDDDYEFDQYYGEWTVPFYRGHLTSSNLSMCAFTHMFQVVRGASTSDKSNPCIMTNRIPLNQAGIQSIPLAVIAPGSDGCTFQSPDASAGSWQGGFSGATMARSYHGTRVSGGKMFRIEVADYSQSGATNGGAGVSLRSRSGKFYKTRNNSFNARRSDFRGTNKVYLVPFNELSKTYVSIHKNGGKIASITPITG 376          
BLAST of Ggra3964.t1 vs. uniprot
Match: Q7XY80 (Phycobilisome 31.8kD linker polypeptide (Fragment) n=1 Tax=Griffithsia japonica TaxID=83288 RepID=Q7XY80_GRIJA)

HSP 1 Score: 478 bits (1231), Expect = 3.870e-167
Identity = 242/324 (74.69%), Postives = 270/324 (83.33%), Query Frame = 0
Query:   48 SLDKLGLDKFTERFVVEEAGRPAGFSAEYEVYIQAIYRQVFGNAYIMESEREEMKKFESEFRDLRLTVKDFCRALGKTYQYRKRFFDGRPLYGAIELNFKHFLGRTPDGLEQYRAKSAVYDASGYDAFIDAFFDDGXXXXXXXEYRVPYYRGHLTTSRLSMCAFTHMFQVVRGASTSDKANPRTMTNKITLNRAGIQSIPLAVVAPGADGCTFLAPDASSGSWQNGVSGLTMARTSHGTRQQDGKMFRIEVTRLSQQGATNGAAGVTLRSRSGRFYKTKNASSGSKLSDFRRANAVYLVPFSELSDTYVKIHKNGGVIASITPV 371
            SLDKLGLDKFT+R+ V EAGRP GFSA+YEV I+A Y Q+F NAYIMESER EM K ESEFRD RLTVKDFCRA+ K+YQY+KRFFDGRPLYGAIEL FKH LGRTPDGLE YRAKSAVYD  GY++FIDAFFDDG       E+ VP+YRGHLTTS LSM AFTHMFQVVRG STS +  PRT+TNKITLN+AGIQSIPLAV+ PGADG  FLAPDASSGSWQ G SG TMARTSHGTRQ  GKMFRIEV   +Q GAT G +G+ L+SRSGRFYK++N S+ +K S FRR+N VYLVPF ELS TY+KIHK+GG IASITP+
Sbjct:    1 SLDKLGLDKFTDRYEVNEAGRPDGFSADYEVIIRACYLQIFANAYIMESERAEMAKAESEFRDGRLTVKDFCRAIAKSYQYKKRFFDGRPLYGAIELCFKHILGRTPDGLEHYRAKSAVYDTKGYESFIDAFFDDGEYDAYFDEFCVPFYRGHLTTSNLSMAAFTHMFQVVRGWSTSGQVKPRTLTNKITLNQAGIQSIPLAVIPPGADGAIFLAPDASSGSWQGGFSGATMARTSHGTRQDKGKMFRIEVAHNTQFGATGGGSGIKLQSRSGRFYKSRN-SAPAKKSTFRRSNNVYLVPFDELSATYIKIHKDGGSIASITPI 323          
BLAST of Ggra3964.t1 vs. uniprot
Match: phycobilisome linker polypeptide n=1 Tax=Escherichia coli TaxID=562 RepID=UPI001CA3EC32 (phycobilisome linker polypeptide n=1 Tax=Escherichia coli TaxID=562 RepID=UPI001CA3EC32)

HSP 1 Score: 390 bits (1001), Expect = 1.600e-131
Identity = 213/356 (59.83%), Postives = 256/356 (71.91%), Query Frame = 0
Query:   18 SSFAGSSLRSAAPAAPSRF-TARLGTVLGNSSLDKLGLDKF-TERFVVEEAGRPAGFSAEYEVYIQAIYRQVFGNAYIMESEREEMKKFESEFRDLRLTVKDFCRALGKTYQYRKRFFDGRPLYGAIELNFKHFLGRTPDGLEQYRAKSAVYDASGYDAFIDAFFDDGXXXXXXXEYRVPYYRGHLTTSRLSMCAFTHMFQVVRGASTSDKANPRTMTNKITLNRAGIQSIPLAVVAPGADGCTFLAPDASSGSWQNGVSGLTMARTSHGTRQQDGKMFRIEVTRLSQQGATNGAAGVTLRSRSGRFYKTKNASSGSKLSDFRRANAVYLVPFSELSDTYVKIHKNGGVIASITPV 371
            S FAG+++ +AAP   +   TARLGTV GN+SLDKLGLDK   ERF V +  RPAGFSA+YE  I  +YR VFGNAYIM+SER  M K ESEFRD R TVKDF RAL K+ +Y++RFFD RPLYGAIEL +KH LGRTPDGLE+YR +S VYD  GY+A +D+F DDG       E  VPY RGHLTT+  SM AFTHMFQ+ RG+  SDK+NPRTM N ITLNRAGI+SIPL VVAPG+ G  F +   ++GSW +GVSG   ARTSHG R + G M+R+E T   Q+ + NGAAGV  +    + Y+ +N S  S +S +R  +  YLVP+SELS  Y KIHK GGVIASITPV
Sbjct:   16 SGFAGTAVSTAAPTVSAMTPTARLGTVAGNTSLDKLGLDKQQAERFSVMDNCRPAGFSADYEEIISNVYRTVFGNAYIMDSERATMAKDESEFRDGRTTVKDFVRALVKSNEYKRRFFDSRPLYGAIELAYKHVLGRTPDGLEEYRVRSGVYDTKGYEAAMDSFLDDGEYDQAFGEDMVPYQRGHLTTTNKSMAAFTHMFQMHRGSGVSDKSNPRTMVNGITLNRAGIRSIPLPVVAPGSAGAAFASVAPNAGSWISGVSGGDAARTSHGGRNEGGGMYRVEATGFGQRASVNGAAGVPGK----KLYRGRNGSR-SAISQYRFPSQSYLVPYSELSSIYQKIHKQGGVIASITPV 366          
BLAST of Ggra3964.t1 vs. uniprot
Match: A0A1X6NR82 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NR82_PORUM)

HSP 1 Score: 385 bits (989), Expect = 9.580e-129
Identity = 215/374 (57.49%), Postives = 264/374 (70.59%), Query Frame = 0
Query:    1 MAFVPVLSLRPAS-APLASSFAGSSLRSAAPAAPSRF-TARLGTVLGNSSLDKLGLDKF-TERFVVEEAGRPAGFSAEYEVYIQAIYRQVFGNAYIMESEREEMKKFESEFRDLRLTVKDFCRALGKTYQYRKRFFDGRPLYGAIELNFKHFLGRTPDGLEQYRAKSAVYDASGYDAFIDAFFDDGXXXXXXXEYRVPYYRGHLTTSRLSMCAFTHMFQVVRGASTSDKANPRTMTNKITLNRAGIQSIPLAVVAPGADGCTFLAPDASSGSWQNGVSGLTMARTSHGTRQQDGKMFRIEVTRLSQQGATNGAAGVTLRSRSGRFYKTKNASSGSKLSDFRRANAVYLVPFSELSDTYVKIHKNGGVIASITPV 371
            MAFV   +    S A   S FAG+++ +AAP   +   TARLGTV GN+SL KLGLDK   ERF V +  RPAGFS++YE  I  +YR VFGNAYIMESER  M K ESEFRD R TVKDF RAL K+ +Y++RFF+ RPLYGAIEL +KH LGRTPDGLE+YR +S VYD  GYDA++D+F DDG       E  VPY RGHLTT+  SM AFTHMFQ+ RG+  SDK+NPRTM + ITLN AGI+SIP+AVVAPGA G T+ +    +GSW +GV+G   AR+SHG R + G+MFR+E TR +Q  + NG AG+  +    + Y+ +N S  S +S +R  N  +LVP+SELS  Y KIHK GGVIASITPV
Sbjct:   64 MAFVSTFAAAAGSVAARTSGFAGAAVSTAAPTVSAMTPTARLGTVAGNNSLPKLGLDKQQAERFSVMDNVRPAGFSSDYEEIISNVYRTVFGNAYIMESERATMAKDESEFRDGRTTVKDFVRALVKSNEYKRRFFESRPLYGAIELAYKHILGRTPDGLEEYRVRSGVYDTKGYDAYMDSFLDDGEYDQAFGEDLVPYLRGHLTTTNKSMAAFTHMFQMHRGSGVSDKSNPRTMVHGITLNGAGIRSIPIAVVAPGAAGATYQSVAPFAGSWISGVTGGDAARSSHGARNEGGQMFRVEATRFNQAASINGRAGLPGK----KLYRGRNGSR-SAISQYRFPNQSFLVPYSELSAIYQKIHKQGGVIASITPV 432          
BLAST of Ggra3964.t1 vs. uniprot
Match: A0A5J4YM59 (Phycobilisome 31.8 kDa linker polypeptide, phycoerythrin-associated, rod n=2 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YM59_PORPP)

HSP 1 Score: 358 bits (919), Expect = 3.600e-119
Identity = 204/372 (54.84%), Postives = 248/372 (66.67%), Query Frame = 0
Query:    2 AFVPVLSLRPASAPLASSFAGSSLRSAAPAAPSRFTARLGTVLGNSSLDKLGLDKF-TERFVVEEAGRPAGFSAEYEVYIQAIYRQVFGNAYIMESEREEMKKFESEFRDLRLTVKDFCRALGKTYQYRKRFFDGRPLYGAIELNFKHFLGRTPDGLEQYRAKSAVYDASGYDAFIDAFFDDGXXXXXXXEYRVPYYRGHLTTSRLSMCAFTHMFQVVRGASTSDKANPRTMTNKITLNRAGIQSIPLAVVAPGADGCTFLAPDASSGSWQNGVSGLTMARTSHGT-RQQDGKMFRIEVTRLSQQGATNGAAGVTLRSRSGRFYKTKNASSGSKLSDFRRANAVYLVPFSELSDTYVKIHKNGGVIASITPV 371
            AFV  +   P S   + S +   +RS +  AP   T RLGTV GNSSLDKLGLDKF +E           GFS+EYE  I A Y+Q+FGNAYIM+SER EM K ES FRD +LT+KDFCRAL KT QY+KRFFD RPLYGAIELNFK+ LGRTPDGLE YRAKSAVYD  GY+AF+DAFFDDG       +Y VP+YRG+ T + LSM AFTH F++VRG+STSDKANP +M   I LN  GI   PLAV+APGA G  +    + +GSWQ+G +GL  AR + G     +GK FR+EVT  +Q G      G+T  +  G+ YK       +KLS + R+N  Y+V F EL+  Y +I KNGG IASITP+
Sbjct:    3 AFVTGMGAAPRSQMRSVSGSAVCVRSDSVRAPGALTMRLGTVSGNSSLDKLGLDKFLSESNRAYTPRAQPGFSSEYEQIISATYKQLFGNAYIMDSERAEMAKQESMFRDGQLTLKDFCRALAKTEQYKKRFFDSRPLYGAIELNFKNILGRTPDGLEHYRAKSAVYDTKGYEAFVDAFFDDGEYDEVYDDYTVPFYRGYKTEANLSMAAFTHFFRMVRGSSTSDKANPNSMQKDIPLNYYGITKTPLAVIAPGAAGTAYTESFSGTGSWQSGRAGLNAARVALGVPATANGKSFRVEVTGYTQPGF-----GITAGTAVGKLYKA------NKLSRYPRSNKSYVVGFDELTPLYQRITKNGGTIASITPL 363          
BLAST of Ggra3964.t1 vs. uniprot
Match: A0A7S2ZQY3 (Hypothetical protein n=2 Tax=Eukaryota TaxID=2759 RepID=A0A7S2ZQY3_9RHOD)

HSP 1 Score: 270 bits (689), Expect = 1.300e-84
Identity = 166/358 (46.37%), Postives = 215/358 (60.06%), Query Frame = 0
Query:   18 SSFAGSSLRSAAPAAPSRFTARLGTVLGNSSLDKLGLDKFTERFVVEEAGRPAGFSAEYEVYIQAIYRQVFGNAYIMESEREEMKKFESEFRDLRLTVKDFCRALGKTYQYRKRFFDGRPLYGAIELNFKHFLGRTPDGLEQYRAKSAVYDASGYDAFIDAFFDDGXXXXXXXEYRVPYYRGHLTTSRLSMCAFTHMFQVVRGASTSDKANPRTMTNKITLNRAGIQSIPLAVVAPG----ADGCTFLAPDASSGSWQNGVSGLTMARTSHGTRQQDGKMFRIEVTRLSQQGATNGAAGVTLRSRSGRFYKTKNASSGSKLSDFRRANAVYLVPFSELSDTYVKIHKNGGVIASITPV 371
            S F G+++ SAAP    + T  +G  +GN +L  LGLDKF ++++V           +Y+  I A+Y  VFGNAYIMESER EM   ES+F+    +VK+F  AL  T +Y++RFFD RPLYGAIE+NFKHFLGRTPDGLE+YRAKSAVYDA GY  F+ AFFDDG       ++ VP+YRG+ T + LSM AFTH F+VVRG STSDK +   +TN I LN  GI+SIP+ V+ PG     +G  F+AP A+  S  N         T        G ++RIE+T   Q  A  G +GV   S  G+ Y   N       S F R+N   +    EL+  + +I +NGG I SITPV
Sbjct:   20 SGFTGAAISSAAP--KGKATIMMG--IGNQALGSLGLDKFMDKYMVTGVPMNQVSPTDYQRVIDAVYHHVFGNAYIMESERAEMAVAESQFKLGEYSVKEFVMALAMTEEYQRRFFDNRPLYGAIEMNFKHFLGRTPDGLEEYRAKSAVYDAKGYAKFVQAFFDDGEYDLAFGDWMVPFYRGYRTEANLSMAAFTHFFKVVRGGSTSDKGS---ITNPIPLNSKGIRSIPIPVIEPGRAVYVEG--FVAPGAAGNS-TNSAPASKFGATP-------GPLYRIEITGYGQT-AARGRSGV---SAVGKVYSRANG-----YSTFARSNKAIVCSKDELNKKFQEITRNGGKICSITPV 351          
BLAST of Ggra3964.t1 vs. uniprot
Match: A0A0D6AEB0 (Phycobilisome phycoerythrin-associated linker polypeptide n=1 Tax=Geminocystis sp. NIES-3708 TaxID=1615909 RepID=A0A0D6AEB0_9CHRO)

HSP 1 Score: 218 bits (556), Expect = 2.050e-65
Identity = 141/323 (43.65%), Postives = 184/323 (56.97%), Query Frame = 0
Query:   51 KLGLDKFTERFVVEEAGRPAGFSAEYEVYIQAIYRQVFGNAYIMESEREEMKKFESEFRDLRLTVKDFCRALGKTYQYRKRFFDGRPLYGAIELNFKHFLGRTPDGLEQYRAKSAVYDASGYDAFIDAFFDDGXXXXXXXEYRVPYYRGHLTTSRLSMCAFTHMFQVVRGASTSDKANPRTMTNKITLNRAGIQSIPLAVVAP--GADGCTFLAPDASSGSWQNGVSGLTMARTSHGTRQQDGKMFRIEVTRLSQQGATNGAAGVTLRSRSGRFYKTKNASSGSKLSDFRRANAVYLVPFSELSDTYVKIHKNGGVIASITPV 371
            +LG+  F E   +E    P   + + E  I+A+YRQVFGNAYIMESER  +   ES+F+   L+V++F RALGK+  Y  RFFD  P Y  IELNFKHFLGRTP+GLE+ RA S + D  G++A ID++ D         E  VPYYRG+ T    +M  FTHMF ++RGAS+SD     +  + + LN+  IQ  PLAV+ P  G+ G  +   D + GS   G         S GT  + GK+FRIEVT                       Y +      +++S FRR+N VYLVPF+ LS TY KIH+ GG IASITPV
Sbjct:    8 QLGVSLFEETAPIERL--PNSSTEDLETIIRAVYRQVFGNAYIMESERAIVP--ESQFKRGELSVREFIRALGKSSAYSSRFFDTCPRYRFIELNFKHFLGRTPEGLEETRAHSTILDTEGFEAEIDSYLDSDEYQNAYGENIVPYYRGYKTEPNRTMVEFTHMFAMLRGASSSDFKGSLSGKSPV-LNQYVIQGTPLAVIPPSGGSAGDGWSFQDRTIGSRSQG---------SFGTGDE-GKVFRIEVTG----------------------YGSPKGKGVNRVSAFRRSNQVYLVPFNRLSATYQKIHRQGGTIASITPV 293          
BLAST of Ggra3964.t1 vs. uniprot
Match: A0A6I5NSN2 (Photosystem I reaction center subunit XII n=1 Tax=Leptolyngbya sp. SIOISBB TaxID=2607771 RepID=A0A6I5NSN2_9CYAN)

HSP 1 Score: 210 bits (535), Expect = 2.300e-62
Identity = 138/323 (42.72%), Postives = 178/323 (55.11%), Query Frame = 0
Query:   51 KLGLDKFTERFVVEEAGRPAGFSAEYEVYIQAIYRQVFGNAYIMESEREEMKKFESEFRDLRLTVKDFCRALGKTYQYRKRFFDGRPLYGAIELNFKHFLGRTPDGLEQYRAKSAVYDASGYDAFIDAFFDDGXXXXXXXEYRVPYYRGHLTTSRLSMCAFTHMFQVVRGASTSD-KANPRTMTNKITLNRAGIQSIPLAVVAPGADGCTFLAPDASSGSWQNGVSGLTMARTSHGT-RQQDGKMFRIEVTRLSQQGATNGAAGVTLRSRSGRFYKTKNASSGSKLSDFRRANAVYLVPFSELSDTYVKIHKNGGVIASITPV 371
            +LG+  F E   VE    P   + E E YI+A+YRQV GNAY+MESER  +   ES+F+   L+V++F RA+ K+  YR RFF   P Y A ELNF+H LGRTP  LE+ R  S + D  G++A IDA+ D         E  VPY RG+ T +  SM  FTH+FQ+VRGAS+S  KA+      K  LN   IQ  P  VV+P +DG TF  P  +             AR  HG     DGK++R+EVT                            A++  K+S FRRAN VYLVPF +LS+TY ++H+ GGVIASIT V
Sbjct:    8 RLGVSLFDETPPVEWV--PGRSAEEAEAYIRAVYRQVLGNAYVMESERLALP--ESQFKLGELSVREFVRAVAKSDLYRSRFFASCPRYRATELNFRHLLGRTPLDLEEMRMHSTILDTEGFEADIDAYLDSDEYQNTFGENFVPYIRGYKTEACDSMVQFTHLFQMVRGASSSSLKADVSGKQPK--LNSLVIQGTPTPVVSPASDGATFQNPPVA-------------ARQRHGVGATADGKVYRVEVTGY-------------------------RANTARKVSQFRRANQVYLVPFDKLSETYQRVHRQGGVIASITAV 286          
The following BLAST results are available for this feature:
BLAST of Ggra3964.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IPZ56.680e-22285.25Phycobilisome 31.8 kDa linker polypeptide, phycoer... [more]
A0A291FEB27.400e-18673.92LR1 n=1 Tax=Griffithsia pacifica TaxID=35689 RepID... [more]
R7QC842.410e-18371.96Phycobilisome 31.8kD linker polypeptide n=1 Tax=Ch... [more]
Q7XY803.870e-16774.69Phycobilisome 31.8kD linker polypeptide (Fragment)... [more]
phycobilisome linker polypeptide n=1 Tax=Escherichia coli TaxID=562 RepID=UPI001CA3EC321.600e-13159.83phycobilisome linker polypeptide n=1 Tax=Escherich... [more]
A0A1X6NR829.580e-12957.49Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A5J4YM593.600e-11954.84Phycobilisome 31.8 kDa linker polypeptide, phycoer... [more]
A0A7S2ZQY31.300e-8446.37Hypothetical protein n=2 Tax=Eukaryota TaxID=2759 ... [more]
A0A0D6AEB02.050e-6543.65Phycobilisome phycoerythrin-associated linker poly... [more]
A0A6I5NSN22.300e-6242.72Photosystem I reaction center subunit XII n=1 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 94..114
NoneNo IPR availablePANTHERPTHR34011:SF5PHYCOBILISOME 32.1 KDA LINKER POLYPEPTIDE, PHYCOCYANIN-ASSOCIATED, ROD 2coord: 68..241
NoneNo IPR availablePANTHERPTHR34011PHYCOBILISOME 32.1 KDA LINKER POLYPEPTIDE, PHYCOCYANIN-ASSOCIATED, ROD 2-RELATEDcoord: 68..241
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 29..373
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..28
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 11..28
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..10
IPR008213CpcD-like domainSMARTSM01094CpcD_2coord: 291..371
e-value: 1.4E-7
score: 41.2
IPR008213CpcD-like domainPFAMPF01383CpcDcoord: 331..370
e-value: 1.7E-10
score: 41.0
IPR008213CpcD-like domainPROSITEPS51441CPCD_LIKEcoord: 291..371
score: 13.176981
IPR001297Phycobilisome linker domainPFAMPF00427PBS_linker_polycoord: 74..198
e-value: 4.2E-32
score: 110.8
IPR001297Phycobilisome linker domainPROSITEPS51445PBS_LINKERcoord: 43..226
score: 24.990108
IPR038255Phycobilisome linker domain superfamilyGENE3D1.10.3130.20Phycobilisome linker domaincoord: 68..206
e-value: 3.0E-35
score: 122.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000908_piloncontigtig00000908_pilon:227829..228950 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra3964.t1Ggra3964.t1Gracilaria gracilis GNS1m malemRNAtig00000908_pilon 227829..228950 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra3964.t1 ID=Ggra3964.t1|Name=Ggra3964.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=374bp
MAFVPVLSLRPASAPLASSFAGSSLRSAAPAAPSRFTARLGTVLGNSSLD
KLGLDKFTERFVVEEAGRPAGFSAEYEVYIQAIYRQVFGNAYIMESEREE
MKKFESEFRDLRLTVKDFCRALGKTYQYRKRFFDGRPLYGAIELNFKHFL
GRTPDGLEQYRAKSAVYDASGYDAFIDAFFDDGEYDAFFDEYRVPYYRGH
LTTSRLSMCAFTHMFQVVRGASTSDKANPRTMTNKITLNRAGIQSIPLAV
VAPGADGCTFLAPDASSGSWQNGVSGLTMARTSHGTRQQDGKMFRIEVTR
LSQQGATNGAAGVTLRSRSGRFYKTKNASSGSKLSDFRRANAVYLVPFSE
LSDTYVKIHKNGGVIASITPVTG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008213CpcD-like_dom
IPR001297PBS_linker_dom
IPR038255PBS_linker_sf