Ggra3949.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra3949.t1
Unique NameGgra3949.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length188
Homology
BLAST of Ggra3949.t1 vs. uniprot
Match: A0A2V3IQJ8 (Thioredoxin domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQJ8_9FLOR)

HSP 1 Score: 296 bits (758), Expect = 2.840e-100
Identity = 135/187 (72.19%), Postives = 157/187 (83.96%), Query Frame = 0
Query:    1 MLPLGTKAPDFELQEPLTGKKLSLADVKGENGLLLVFICNHCPFVIHLQNELAALGRDLKAKGVGMIGISSNDVKKYPADGPDEMAKLASAKFNTFPYVFDETQEVAKAYRAACTPDIYLFDKDMNLAYRGQIDDSRPGNGRPVTGKTIREAVDLMVEGKQYPEESMRPSIGCNIKWVEGNEPDYFG 187
            MLPLGT A DF L EPLTGK +SLADVK ENG+L+ F+ NHCPFVI LQ++L ALGRDLK KGVGM+GISSND+  YP+D P+ MA+LAS KF TFPY+FD TQE+AK+YRAACTPDIYLFDKD+ L YRG++DD+RPGNG+ VTG++IR AVDLMV GK  P ESM PS+GCNIKW  GN PDYFG
Sbjct:    8 MLPLGTPAADFSLLEPLTGKSVSLADVKLENGVLIAFLSNHCPFVILLQDQLQALGRDLKEKGVGMVGISSNDIVAYPSDNPERMAELASTKFTTFPYLFDATQEIAKSYRAACTPDIYLFDKDLKLVYRGRVDDARPGNGKKVTGRSIRAAVDLMVTGKPIPAESMLPSMGCNIKWARGNAPDYFG 194          
BLAST of Ggra3949.t1 vs. uniprot
Match: Q3JCE8 (Thioredoxin domain-containing protein n=4 Tax=Nitrosococcus TaxID=1227 RepID=Q3JCE8_NITOC)

HSP 1 Score: 244 bits (623), Expect = 9.780e-80
Identity = 108/187 (57.75%), Postives = 142/187 (75.94%), Query Frame = 0
Query:    1 MLPLGTKAPDFELQEPLTGKKLSLADVKGENGLLLVFICNHCPFVIHLQNELAALGRDLKAKGVGMIGISSNDVKKYPADGPDEMAKLASAKFNTFPYVFDETQEVAKAYRAACTPDIYLFDKDMNLAYRGQIDDSRPGNGRPVTGKTIREAVDLMVEGKQYPEESMRPSIGCNIKWVEGNEPDYFG 187
            ML LGT+APDF+L EP TG+ +SLAD KG  GLL++F+CNHCP+V H+ + L+   R+ + KG+ ++GIS NDV+ YP D P++MA+   A+   FPY++DETQE+AKAY+AACTPD +LFDK+  L YRGQ DDSRPGN  PVTG+ ++ AV  ++ G+  P E  RPS+GCNIKW  GNEPDYFG
Sbjct:    8 MLDLGTQAPDFQLLEPATGRTVSLADFKGAGGLLVIFMCNHCPYVKHISSALSQFAREYQPKGLAIVGISVNDVENYPDDSPEKMAEEVEAQGYIFPYLYDETQEIAKAYKAACTPDFFLFDKNHKLVYRGQFDDSRPGNDLPVTGEDLQTAVKAVLSGQPIPNEQ-RPSMGCNIKWKPGNEPDYFG 193          
BLAST of Ggra3949.t1 vs. uniprot
Match: A0A7C5XYP4 (Thioredoxin family protein n=1 Tax=Chromatiales bacterium TaxID=2026725 RepID=A0A7C5XYP4_9GAMM)

HSP 1 Score: 243 bits (620), Expect = 2.800e-79
Identity = 109/187 (58.29%), Postives = 140/187 (74.87%), Query Frame = 0
Query:    1 MLPLGTKAPDFELQEPLTGKKLSLADVKGENGLLLVFICNHCPFVIHLQNELAALGRDLKAKGVGMIGISSNDVKKYPADGPDEMAKLASAKFNTFPYVFDETQEVAKAYRAACTPDIYLFDKDMNLAYRGQIDDSRPGNGRPVTGKTIREAVDLMVEGKQYPEESMRPSIGCNIKWVEGNEPDYFG 187
            ML LGT AP F+L EPLTG+++S+ D K   GLL++FICNHCP+V H+Q+ LA  GR+ + KG+ ++ I+SNDV  YP D P++M +       TFPY+FDETQEVAKAYRAACTPD +LFD+D  L YRGQ DD+RP N  PVTGK +R A D ++EG+  P++  +PS+GCNIKW  GNEPDYFG
Sbjct:    8 MLELGTPAPYFKLPEPLTGREVSIDDFKDAPGLLVMFICNHCPYVKHIQHALAEFGREYQQKGLAIVAINSNDVANYPDDSPEKMVEEVRRVGYTFPYLFDETQEVAKAYRAACTPDFFLFDRDRRLVYRGQFDDARPRNDAPVTGKDLRAAADALLEGRPIPQDQ-KPSLGCNIKWKPGNEPDYFG 193          
BLAST of Ggra3949.t1 vs. uniprot
Match: D5BYP3 (Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen n=2 Tax=Nitrosococcus TaxID=1227 RepID=D5BYP3_NITHN)

HSP 1 Score: 242 bits (617), Expect = 8.000e-79
Identity = 107/187 (57.22%), Postives = 142/187 (75.94%), Query Frame = 0
Query:    1 MLPLGTKAPDFELQEPLTGKKLSLADVKGENGLLLVFICNHCPFVIHLQNELAALGRDLKAKGVGMIGISSNDVKKYPADGPDEMAKLASAKFNTFPYVFDETQEVAKAYRAACTPDIYLFDKDMNLAYRGQIDDSRPGNGRPVTGKTIREAVDLMVEGKQYPEESMRPSIGCNIKWVEGNEPDYFG 187
            ML LGT+APDF+L EP TG+ +SLAD K   GLL++F+CNHCP+V H+ + LA   R+ ++KG+ ++ I++NDV+ YP D P++MA+   A+   FPY++D+TQEVAK+Y+AACTPD +LFDKD  L YRGQ DDSRP N  PVTGK +R AV+ ++ G+  P E  RPS+GCNIKW  GNEPDYFG
Sbjct:    8 MLDLGTQAPDFQLPEPATGRTVSLADFKDAPGLLVIFMCNHCPYVKHISDGLAQFAREYQSKGLAIVAINANDVEHYPDDSPEKMAEEVKAQGYVFPYLYDDTQEVAKSYKAACTPDFFLFDKDCKLVYRGQFDDSRPRNDLPVTGKDLRAAVEAVLSGQPVPSEQ-RPSMGCNIKWKAGNEPDYFG 193          
BLAST of Ggra3949.t1 vs. uniprot
Match: A0A7C3SY11 (Thioredoxin family protein n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7C3SY11_9BACT)

HSP 1 Score: 242 bits (617), Expect = 8.270e-79
Identity = 107/186 (57.53%), Postives = 140/186 (75.27%), Query Frame = 0
Query:    1 MLPLGTKAPDFELQEPLTGKKLSLADVKGENGLLLVFICNHCPFVIHLQNELAALGRDLKAKGVGMIGISSNDVKKYPADGPDEMAKLASAKFNTFPYVFDETQEVAKAYRAACTPDIYLFDKDMNLAYRGQIDDSRPGNGRPVTGKTIREAVDLMVEGKQYPEESMRPSIGCNIKWVEGNEPDYF 186
            MLPLGT+APDF L++  TGK +   D +G  GLL++FICNHCPFV H+Q EL  L  + + KG+G++GI+SN+ +KYP D P++M +  +    TFPY++DETQEVA+ Y+AACTPD +LFD+D  L YRGQ DDSRPGN +P+ GK +R A+D ++EGK  PE   +PSIGCNIKW  GNEPDYF
Sbjct:    8 MLPLGTEAPDFSLKDT-TGKIVQRDDFRGRKGLLVMFICNHCPFVKHIQKELVKLTNEYQPKGIGIVGINSNNAEKYPEDSPEKMKEEVAKAGYTFPYLYDETQEVARKYKAACTPDFFLFDEDFKLVYRGQFDDSRPGNSKPIDGKDLRNALDCLLEGKPIPEHQ-KPSIGCNIKWKPGNEPDYF 191          
BLAST of Ggra3949.t1 vs. uniprot
Match: A0A8G0Q4T6 (Thioredoxin family protein n=1 Tax=Leptolyngbya sp. 15MV TaxID=2819933 RepID=A0A8G0Q4T6_9CYAN)

HSP 1 Score: 241 bits (616), Expect = 1.530e-78
Identity = 112/194 (57.73%), Postives = 147/194 (75.77%), Query Frame = 0
Query:    1 MLPLGTKAPDFELQEPLTGKKLSLADVKGENGLLLVFICNHCPFVIHLQNELAALGRDLKAKGVGMIGISSNDVKKYPADGPDEMAKLASAKFNTFPYVFDETQEVAKAYRAACTPDIYLFDKDMNLAYRGQIDDSRP--------GNGRPVTGKTIREAVDLMVEGKQYPEESMRPSIGCNIKWVEGNEPDYF 186
            ML LGT+APDF L + ++GK++ LAD  G+  LL++FICNHCP+V  ++ ELA LGRDL+A+GVG++ ISSND++ +P D P++MA  A     TFPY+FDE+Q VAKAYRAACTPD Y+FD+ + LAYRGQ+DDSRP        G G PVTGK +R+AVD ++ G+  P+   +PSIGCNIKW +GNEPDYF
Sbjct:    8 MLELGTRAPDFTLPDTVSGKRVGLADFAGKPALLVMFICNHCPYVKWVRGELARLGRDLQARGVGVVAISSNDIQTHPEDSPEKMAAEARDAGYTFPYLFDESQAVAKAYRAACTPDFYVFDRSLRLAYRGQLDDSRPSGRSTVLPGAGLPVTGKDVRDAVDAVLAGRPVPQPQ-KPSIGCNIKWKKGNEPDYF 200          
BLAST of Ggra3949.t1 vs. uniprot
Match: A0A3M0ZKK1 (Thioredoxin family protein n=1 Tax=Candidatus Dadabacteria bacterium TaxID=2080303 RepID=A0A3M0ZKK1_9BACT)

HSP 1 Score: 239 bits (611), Expect = 6.330e-78
Identity = 110/187 (58.82%), Postives = 139/187 (74.33%), Query Frame = 0
Query:    1 MLPLGTKAPDFELQEPLTGKKLSLADVKGENGLLLVFICNHCPFVIHLQNELAALGRDLKAKGVGMIGISSNDVKKYPADGPDEMAKLASAKFNTFPYVFDETQEVAKAYRAACTPDIYLFDKDMNLAYRGQIDDSRPGNGRPVTGKTIREAVDLMVEGKQYPEESMRPSIGCNIKWVEGNEPDYFG 187
            MLPLGTKAP+F L +   GK +S  D +G    L++FICNHCP+V H+++ELA +GRD   KGVG++ I+SND + YP D P+ MA+        FPY+ DETQEVAKAYRAACTPD++LFD +  L YRGQIDDSRPGNG PVTGK +R A+D ++EG+  P +  +PS+GCNIKW  GNEPDYFG
Sbjct:    8 MLPLGTKAPEFSLPDT-EGKIVSSKDFRGCRAFLVLFICNHCPYVKHVRDELARIGRDYGPKGVGIVAINSNDYRAYPEDSPERMAEEKRQVGYPFPYLIDETQEVAKAYRAACTPDVFLFDSEQRLVYRGQIDDSRPGNGIPVTGKDLRAALDAVLEGRPVPADQ-KPSVGCNIKWKPGNEPDYFG 192          
BLAST of Ggra3949.t1 vs. uniprot
Match: thioredoxin family protein n=1 Tax=Gracilimonas tropica TaxID=454600 RepID=UPI001B7FCB36 (thioredoxin family protein n=1 Tax=Gracilimonas tropica TaxID=454600 RepID=UPI001B7FCB36)

HSP 1 Score: 238 bits (607), Expect = 1.840e-77
Identity = 109/187 (58.29%), Postives = 139/187 (74.33%), Query Frame = 0
Query:    1 MLPLGTKAPDFELQEPLTGKKLSLADVKGENGLLLVFICNHCPFVIHLQNELAALGRDLKAKGVGMIGISSNDVKKYPADGPDEMAKLASAKFNTFPYVFDETQEVAKAYRAACTPDIYLFDKDMNLAYRGQIDDSRPGNGRPVTGKTIREAVDLMVEGKQYPEESMRPSIGCNIKWVEGNEPDYFG 187
            ML LGT+APDF L E + G  LSL       G +++FICNHCP+V+H++NEL  L  +  AKG+G I ISSNDV+KYP D P++MA+    K   FPY++DE QEVAKAY+AACTPD+++FD D  L YRGQ DDSRP N  PVTGK +R+A+D ++EGK  PE+  +PSIGCNIKW +GNEP+YFG
Sbjct:    1 MLELGTEAPDFTL-ESVNGGSLSLNYTNQSKGFVVMFICNHCPYVLHIENELVKLANEYIAKGIGFIAISSNDVEKYPQDSPEKMAE----KNYPFPYLYDEDQEVAKAYKAACTPDLFVFDGDRKLVYRGQFDDSRPKNDEPVTGKDLRQAMDAVLEGKTIPEDRQKPSIGCNIKWKKGNEPEYFG 182          
BLAST of Ggra3949.t1 vs. uniprot
Match: A0A7C2K0Z4 (Thioredoxin family protein n=1 Tax=Schlesneria paludicola TaxID=360056 RepID=A0A7C2K0Z4_9PLAN)

HSP 1 Score: 238 bits (607), Expect = 3.140e-77
Identity = 112/186 (60.22%), Postives = 138/186 (74.19%), Query Frame = 0
Query:    1 MLPLGTKAPDFELQEPLTGKKLSLADVKGENGLLLVFICNHCPFVIHLQNELAALGRDLKAKGVGMIGISSNDVKKYPADGPDEMAKLASAKFNTFPYVFDETQEVAKAYRAACTPDIYLFDKDMNLAYRGQIDDSRPGNGRPVTGKTIREAVDLMVEGKQYPEESMRPSIGCNIKWVEGNEPDYF 186
            MLPLGTKAPDF L   + GK +SL DV G  GLL++F+CNHCPFV HL++ LAA G++ +AKG+ ++ ISSND++ +P D PD+MA  A A   TFPY++D TQEVAKAY+AACTPD YLFD ++ L YRGQ DDSRP NG+PVTG  +R A D ++ GK  P    RPSIGCNIKW  G EP YF
Sbjct:    8 MLPLGTKAPDFSLPN-VDGKTVSLRDVSGGKGLLVMFLCNHCPFVKHLRSALAAFGKEYQAKGLKIVAISSNDIESHPDDSPDKMAAEAKAVGYTFPYLYDATQEVAKAYKAACTPDFYLFDANLALVYRGQFDDSRPSNGKPVTGADLRAAADAVLAGKA-PLPEQRPSIGCNIKWKPGREPAYF 191          
BLAST of Ggra3949.t1 vs. uniprot
Match: K9PUL0 (Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen n=1 Tax=Leptolyngbya sp. PCC 7376 TaxID=111781 RepID=K9PUL0_9CYAN)

HSP 1 Score: 237 bits (605), Expect = 5.350e-77
Identity = 103/187 (55.08%), Postives = 144/187 (77.01%), Query Frame = 0
Query:    1 MLPLGTKAPDFELQEPLTGKKLSLADVKGENGLLLVFICNHCPFVIHLQNELAALGRDLKAKGVGMIGISSNDVKKYPADGPDEMAKLASAKFNTFPYVFDETQEVAKAYRAACTPDIYLFDKDMNLAYRGQIDDSRPGNGRPVTGKTIREAVDLMVEGKQYPEESMRPSIGCNIKWVEGNEPDYFG 187
            M+PLG+ APDF L +  TG+ ++L + +G++GLL++F+C HCPFVIHLQ+ELA +G+D   K +GM+GIS+N V+ +PAD PD++ ++ +     FP ++D+TQE AK Y+AACTPD +LFDKD+ LAYRGQ+DDSRPGN +PVTGK +REA+  ++ G+    +  +PSIGCNIKW  GNEP YFG
Sbjct:    8 MMPLGSAAPDFVLPDVTTGEDVTLENFQGKDGLLVIFMCRHCPFVIHLQDELAKIGQDFIPKNLGMVGISANSVETHPADAPDKLKEMVAELNFNFPILYDKTQETAKTYQAACTPDFFLFDKDLKLAYRGQLDDSRPGNDKPVTGKDLREAIAQVLAGESVSADQ-KPSIGCNIKWKPGNEPSYFG 193          
The following BLAST results are available for this feature:
BLAST of Ggra3949.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IQJ82.840e-10072.19Thioredoxin domain-containing protein n=1 Tax=Grac... [more]
Q3JCE89.780e-8057.75Thioredoxin domain-containing protein n=4 Tax=Nitr... [more]
A0A7C5XYP42.800e-7958.29Thioredoxin family protein n=1 Tax=Chromatiales ba... [more]
D5BYP38.000e-7957.22Alkyl hydroperoxide reductase/ Thiol specific anti... [more]
A0A7C3SY118.270e-7957.53Thioredoxin family protein n=1 Tax=Candidatus Hydr... [more]
A0A8G0Q4T61.530e-7857.73Thioredoxin family protein n=1 Tax=Leptolyngbya sp... [more]
A0A3M0ZKK16.330e-7858.82Thioredoxin family protein n=1 Tax=Candidatus Dada... [more]
thioredoxin family protein n=1 Tax=Gracilimonas tropica TaxID=454600 RepID=UPI001B7FCB361.840e-7758.29thioredoxin family protein n=1 Tax=Gracilimonas tr... [more]
A0A7C2K0Z43.140e-7760.22Thioredoxin family protein n=1 Tax=Schlesneria pal... [more]
K9PUL05.350e-7755.08Alkyl hydroperoxide reductase/ Thiol specific anti... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.30.10Glutaredoxincoord: 1..180
e-value: 4.9E-53
score: 181.5
NoneNo IPR availablePANTHERPTHR43640OS07G0260300 PROTEINcoord: 2..181
NoneNo IPR availableCDDcd02969PRX_like1coord: 5..177
e-value: 1.15267E-85
score: 247.923
IPR000866Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidantPFAMPF00578AhpC-TSAcoord: 5..129
e-value: 1.0E-19
score: 70.7
IPR013766Thioredoxin domainPROSITEPS51352THIOREDOXIN_2coord: 2..158
score: 14.368243
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 1..185

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000908_piloncontigtig00000908_pilon:192518..193162 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra3949.t1Ggra3949.t1Gracilaria gracilis GNS1m malemRNAtig00000908_pilon 192518..193162 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra3949.t1 ID=Ggra3949.t1|Name=Ggra3949.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=188bp
MLPLGTKAPDFELQEPLTGKKLSLADVKGENGLLLVFICNHCPFVIHLQN
ELAALGRDLKAKGVGMIGISSNDVKKYPADGPDEMAKLASAKFNTFPYVF
DETQEVAKAYRAACTPDIYLFDKDMNLAYRGQIDDSRPGNGRPVTGKTIR
EAVDLMVEGKQYPEESMRPSIGCNIKWVEGNEPDYFG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000866AhpC/TSA
IPR013766Thioredoxin_domain
IPR036249Thioredoxin-like_sf