Ggra3942.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra3942.t1
Unique NameGgra3942.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length227
Homology
BLAST of Ggra3942.t1 vs. uniprot
Match: A0A2V3IQQ9 (BUD13-like n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQQ9_9FLOR)

HSP 1 Score: 262 bits (670), Expect = 9.430e-86
Identity = 154/227 (67.84%), Postives = 173/227 (76.21%), Query Frame = 0
Query:    1 MYPLSN-EKNSRGCSSTNIEGDNNTKIDEGKVKETSRKYDIPFDTGNVSDASPPRRPRPQPASASRQTRVITSKRDQDEKEXXXXXXXXRRVRSRDSGVYPSPAETRPRKRSRSIEGRRFSTDKMARRTSHSSATDDDLISVRSGANPVASSSPRERLGFHRQTATRFPHFRSPFEQRAPPNRYGIRPGPRWDGVDRTNGFEVRLENMRAEKRSIDYQAYRASVADL 226
            M P  N EK S+G  ST+ +G  +    E + K  S  ++ P +TGNVSDASPPRRPRP   SA R TRV  S+ DQDE+ XXXXXXXXRRVRSRD G YPS A++RPRKRSRSIEGRR STD  ARR SHSS TDDDLISVRS ANP+AS+SPRER+   RQ   R    RSPF  RAPPNRYGI PGPRWDGVDR+NGFEVRLENM+AEKRS +YQAY+ASVADL
Sbjct:    1 MSPSPNDEKQSKGYLSTHRKGSQSANNPEERPKNVSHNHETPIETGNVSDASPPRRPRPI-LSAPRPTRVGASRADQDERXXXXXXXXXRRVRSRDPGAYPSAADSRPRKRSRSIEGRRVSTDITARRASHSSVTDDDLISVRSSANPLASNSPRERMPRQRQAVIRIQQTRSPFAHRAPPNRYGILPGPRWDGVDRSNGFEVRLENMKAEKRSANYQAYKASVADL 226          
BLAST of Ggra3942.t1 vs. uniprot
Match: R7Q464 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q464_CHOCR)

HSP 1 Score: 65.9 bits (159), Expect = 1.920e-9
Identity = 28/46 (60.87%), Postives = 36/46 (78.26%), Query Frame = 0
Query:  181 NRYGIRPGPRWDGVDRTNGFEVRLENMRAEKRSIDYQAYRASVADL 226
            NRY I  GPRWDGVDR+NGFE R+  MRA++R  +  AY+ASV+D+
Sbjct:  185 NRYNISAGPRWDGVDRSNGFESRIAKMRAQRREDERTAYKASVSDM 230          
BLAST of Ggra3942.t1 vs. uniprot
Match: BUD13 homolog n=1 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B88AAF8 (BUD13 homolog n=1 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B88AAF8)

HSP 1 Score: 67.4 bits (163), Expect = 1.970e-9
Identity = 31/59 (52.54%), Postives = 41/59 (69.49%), Query Frame = 0
Query:  168 PHFRSPFEQRAPPNRYGIRPGPRWDGVDRTNGFEVRLENMRAEKRSIDYQAYRASVADL 226
            P +R P   + PPNRYGI PG RWDGVDR+NGFE +L    AE++++D  AY+ S  D+
Sbjct:  487 PKYRGP---QPPPNRYGIPPGYRWDGVDRSNGFEAKLFAKSAERKAVDMMAYKWSTEDM 542          
BLAST of Ggra3942.t1 vs. uniprot
Match: A0A6B2ECE8 (BUD13 homolog (Fragment) n=1 Tax=Phlebotomus kandelakii TaxID=1109342 RepID=A0A6B2ECE8_9DIPT)

HSP 1 Score: 67.0 bits (162), Expect = 2.540e-9
Identity = 29/48 (60.42%), Postives = 39/48 (81.25%), Query Frame = 0
Query:  179 PPNRYGIRPGPRWDGVDRTNGFEVRLENMRAEKRSIDYQAYRASVADL 226
            PPNR+GIRPG RWDGVDR+NG+E R  +M+ +K++I+ +AYR S  DL
Sbjct:  435 PPNRFGIRPGYRWDGVDRSNGYEKRWFDMQNKKKAIEEEAYRYSTEDL 482          
BLAST of Ggra3942.t1 vs. uniprot
Match: A0A835CNT8 (BUD13 homolog n=1 Tax=Aphidius gifuensis TaxID=684658 RepID=A0A835CNT8_9HYME)

HSP 1 Score: 63.2 bits (152), Expect = 3.520e-9
Identity = 26/47 (55.32%), Postives = 37/47 (78.72%), Query Frame = 0
Query:  180 PNRYGIRPGPRWDGVDRTNGFEVRLENMRAEKRSIDYQAYRASVADL 226
            PNR+GIRPG RWDGVDR+NG+E R  N R  + +++ +AY+ S+AD+
Sbjct:   88 PNRFGIRPGCRWDGVDRSNGYEKRWFNARNARTAVEEEAYKWSIADM 134          
BLAST of Ggra3942.t1 vs. uniprot
Match: B7QIA6 (BUD13 homolog (Fragment) n=5 Tax=Ixodes TaxID=6944 RepID=B7QIA6_IXOSC)

HSP 1 Score: 66.6 bits (161), Expect = 3.740e-9
Identity = 30/48 (62.50%), Postives = 37/48 (77.08%), Query Frame = 0
Query:  179 PPNRYGIRPGPRWDGVDRTNGFEVRLENMRAEKRSIDYQAYRASVADL 226
            PPNRYGIRPG RWDGVDR+NGFE +L  MR  K++ +  AY+ SV +L
Sbjct:  556 PPNRYGIRPGYRWDGVDRSNGFEKKLVEMRNNKKATEEIAYKWSVEEL 603          
BLAST of Ggra3942.t1 vs. uniprot
Match: pre-mRNA-splicing factor cwf26-like isoform X1 n=2 Tax=Camellia sinensis TaxID=4442 RepID=UPI00103615AD (pre-mRNA-splicing factor cwf26-like isoform X1 n=2 Tax=Camellia sinensis TaxID=4442 RepID=UPI00103615AD)

HSP 1 Score: 61.6 bits (148), Expect = 6.760e-9
Identity = 27/49 (55.10%), Postives = 35/49 (71.43%), Query Frame = 0
Query:  178 APPNRYGIRPGPRWDGVDRTNGFEVRLENMRAEKRSIDYQAYRASVADL 226
            APPNRY IRPG  WDGVDR+NGFE  +     EK++ + +AY  SV+D+
Sbjct:   57 APPNRYAIRPGRHWDGVDRSNGFEKEIFKRTNEKQATEREAYLWSVSDM 105          
BLAST of Ggra3942.t1 vs. uniprot
Match: A0A2J6MBR0 (Uncharacterized protein n=2 Tax=Lactuca TaxID=4235 RepID=A0A2J6MBR0_LACSA)

HSP 1 Score: 65.5 bits (158), Expect = 7.960e-9
Identity = 29/49 (59.18%), Postives = 38/49 (77.55%), Query Frame = 0
Query:  178 APPNRYGIRPGPRWDGVDRTNGFEVRLENMRAEKRSIDYQAYRASVADL 226
            A PNRYGIRPG  WDGVDR+NGFE ++ N + EK++ + +AY  SVAD+
Sbjct:  379 AAPNRYGIRPGRHWDGVDRSNGFEKQMFNRQNEKQATEREAYLWSVADM 427          
BLAST of Ggra3942.t1 vs. uniprot
Match: A0A2G5BE90 (Uncharacterized protein n=1 Tax=Coemansia reversa (strain ATCC 12441 / NRRL 1564) TaxID=763665 RepID=A0A2G5BE90_COERN)

HSP 1 Score: 63.5 bits (153), Expect = 8.010e-9
Identity = 30/49 (61.22%), Postives = 35/49 (71.43%), Query Frame = 0
Query:  178 APPNRYGIRPGPRWDGVDRTNGFEVRLENMRAEKRSIDYQAYRASVADL 226
            APPNR+GIRPG RWDGVDR+NGFE +L   +A   S   Q Y  SVAD+
Sbjct:  147 APPNRFGIRPGYRWDGVDRSNGFEKQLFEAKASSSSRRAQDYAYSVADM 195          
BLAST of Ggra3942.t1 vs. uniprot
Match: K7VPB1 (Pre-mRNA-splicing factor of RES complex protein n=5 Tax=Zea mays TaxID=4577 RepID=K7VPB1_MAIZE)

HSP 1 Score: 65.5 bits (158), Expect = 8.840e-9
Identity = 27/49 (55.10%), Postives = 39/49 (79.59%), Query Frame = 0
Query:  178 APPNRYGIRPGPRWDGVDRTNGFEVRLENMRAEKRSIDYQAYRASVADL 226
            APPNRYGI+PG  WDGVDR+NGFE  +  ++ EK++++ +AY  SV+D+
Sbjct:  483 APPNRYGIKPGRHWDGVDRSNGFEKDMFKLKNEKQAMEQEAYLWSVSDM 531          
The following BLAST results are available for this feature:
BLAST of Ggra3942.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IQQ99.430e-8667.84BUD13-like n=1 Tax=Gracilariopsis chorda TaxID=448... [more]
R7Q4641.920e-960.87Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
BUD13 homolog n=1 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B88AAF81.970e-952.54BUD13 homolog n=1 Tax=Gigantopelta aegis TaxID=173... [more]
A0A6B2ECE82.540e-960.42BUD13 homolog (Fragment) n=1 Tax=Phlebotomus kande... [more]
A0A835CNT83.520e-955.32BUD13 homolog n=1 Tax=Aphidius gifuensis TaxID=684... [more]
B7QIA63.740e-962.50BUD13 homolog (Fragment) n=5 Tax=Ixodes TaxID=6944... [more]
pre-mRNA-splicing factor cwf26-like isoform X1 n=2 Tax=Camellia sinensis TaxID=4442 RepID=UPI00103615AD6.760e-955.10pre-mRNA-splicing factor cwf26-like isoform X1 n=2... [more]
A0A2J6MBR07.960e-959.18Uncharacterized protein n=2 Tax=Lactuca TaxID=4235... [more]
A0A2G5BE908.010e-961.22Uncharacterized protein n=1 Tax=Coemansia reversa ... [more]
K7VPB18.840e-955.10Pre-mRNA-splicing factor of RES complex protein n=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018609Bud13PFAMPF09736Bud13coord: 115..204
e-value: 9.7E-15
score: 55.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 23..39
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..22
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 134..150
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..165
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 105..133
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 70..95
NoneNo IPR availablePANTHERPTHR31809BUD13 HOMOLOGcoord: 178..226

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000908_piloncontigtig00000908_pilon:174090..174770 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra3942.t1Ggra3942.t1Gracilaria gracilis GNS1m malemRNAtig00000908_pilon 174090..174770 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra3942.t1 ID=Ggra3942.t1|Name=Ggra3942.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=227bp
MYPLSNEKNSRGCSSTNIEGDNNTKIDEGKVKETSRKYDIPFDTGNVSDA
SPPRRPRPQPASASRQTRVITSKRDQDEKEVSDASPPRRRVRSRDSGVYP
SPAETRPRKRSRSIEGRRFSTDKMARRTSHSSATDDDLISVRSGANPVAS
SSPRERLGFHRQTATRFPHFRSPFEQRAPPNRYGIRPGPRWDGVDRTNGF
EVRLENMRAEKRSIDYQAYRASVADL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018609Bud13