Ggra3852.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra3852.t1
Unique NameGgra3852.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length320
Homology
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BLAST of Ggra3852.t1 vs. uniprot
Match: A0A2V3IMH0 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMH0_9FLOR)

HSP 1 Score: 291 bits (744), Expect = 1.780e-93
Identity = 136/317 (42.90%), Postives = 201/317 (63.41%), Query Frame = 0 
Query:    1 MGYQNREGIGQTLLRNQFAVFVAQILSSKLAFPEHESEHGYNYAEVFDRCNPPPEHVSSDTNANEAHENQACILRQADLLFEHCGRGDCECLKRDVMKHVLPLSGRCKTIGVEHNGFKTQEYSGCIGDVVKRYLGGSNRWPTPYNAIHYRQGDLADKRNAADFWLLELNSMVKFMCKHSDLDIIVVTQGEPQIPKCGNRIVLASNTSETAAFSIMQNARWIGLGISGFALAMAQVSSPERIVMPEYAMPYYDWLRGPKWTVFTKTGADFSFRNGDEALSAIYHPEALDVRTHRLGFSRKHLRFETEVPTRQWQKEAL 317
            +G+QN EGIGQ L RNQ AVFVA+++ +KL+ P   + HGY  +  FD C+ P            A +   C L Q+ LL   C R DC+CL+R +  +V  ++ RCKTIGV  + +K+ EY+GC+ + + RY GG  RW  PY+A+H+R GDLA ++  +    L ++ ++ F+CKHSD DIIVVTQG P IP+CG+R+VLASNT+   AF I Q+A W  +  SG A+AM Q+S P+R+++  + + ++DWL  P WT+    GA F F + + A+ A +    L +R++R    RK+ + E E+P+R+WQ EAL
Sbjct:   60 LGFQNNEGIGQALRRNQMAVFVAEMVQAKLSLPNRTTAHGYALSSFFDHCDMP------------AEQEPFCTLDQSSLLLNRCERADCDCLQRQLAPYVQRMAHRCKTIGVVTDNYKSLEYAGCLRNTLTRYFGGPTRWKRPYDAVHFRLGDLAHRKADSRTTRLWMHFVITFLCKHSDRDIIVVTQGNPTIPRCGSRVVLASNTTIQEAFGIFQHATWTSMEHSGLAIAMMQISRPQRVILSRWTLDFWDWLVVPSWTIVDGDGALFHFDSKELAMKAAFAGGDLSIRSYRNPSLRKYFKIEDEIPSRRWQDEAL 364
The following BLAST results are available for this feature:
BLAST of Ggra3852.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IMH01.780e-9342.90Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000850_piloncontigtig00000850_pilon:2229050..2230009 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra3852.t1Ggra3852.t1Gracilaria gracilis GNS1m malemRNAtig00000850_pilon 2229050..2230009 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra3852.t1 ID=Ggra3852.t1|Name=Ggra3852.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=320bp
MGYQNREGIGQTLLRNQFAVFVAQILSSKLAFPEHESEHGYNYAEVFDRC
NPPPEHVSSDTNANEAHENQACILRQADLLFEHCGRGDCECLKRDVMKHV
LPLSGRCKTIGVEHNGFKTQEYSGCIGDVVKRYLGGSNRWPTPYNAIHYR
QGDLADKRNAADFWLLELNSMVKFMCKHSDLDIIVVTQGEPQIPKCGNRI
VLASNTSETAAFSIMQNARWIGLGISGFALAMAQVSSPERIVMPEYAMPY
YDWLRGPKWTVFTKTGADFSFRNGDEALSAIYHPEALDVRTHRLGFSRKH
LRFETEVPTRQWQKEALLS*
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