Ggra3792.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra3792.t1
Unique NameGgra3792.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length553
Homology
The following BLAST results are available for this feature:
BLAST of Ggra3792.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 314..334
NoneNo IPR availableGENE3D3.10.450.50coord: 425..550
e-value: 6.2E-7
score: 31.5
NoneNo IPR availableGENE3D3.30.70.100coord: 36..118
e-value: 1.3E-11
score: 46.0
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..552
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
IPR007138Antibiotic biosynthesis monooxygenase domainPFAMPF03992ABMcoord: 45..108
e-value: 1.9E-6
score: 27.9
IPR011008Dimeric alpha-beta barrelSUPERFAMILY54909Dimeric alpha+beta barrelcoord: 43..111

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000850_piloncontigtig00000850_pilon:1786512..1788170 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra3792.t1Ggra3792.t1Gracilaria gracilis GNS1m malemRNAtig00000850_pilon 1786512..1788170 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra3792.t1 ID=Ggra3792.t1|Name=Ggra3792.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=553bp
MTSISLLLFLACATLGHCQPSGGSTNENQCATVTPTSIQGFSVFHSRPED
HNALVQELQNTVKPSQSEPGNLQYYMFTDPNQPELIGYFESYVDEEALYS
HLSQDYITDIFTGRYYNELRSKPADLYGPWLLHNVDVDDEIMEMVFYWEM
NCTRQHIWDIITNFTDASWIPGAPTTTIVALDENGQVIEGQEVNPDEVDP
LGPYAQRRTWENTGNVMDVRKVYQNESVYTFTQMNINDVVFSFADVVFYD
YNVTFTLDTEGVDPDSQSRGRYHVQTRIRKGDMQEGRAVEKQLFYSVAVN
HYQTIWNCTQGVFMKNARETVQKVHRALEALADERSGMLQGLYEEGFDME
GFVDDTIGADNGMEAAVIVKEVTSLQATPDLQVVAVEDIMIQTVLGIDVS
SRIIIYQLNEWARIVSIRVYEEGAVRSPRERRLSRATNKYYNTLEKGNAK
AVERLFARKNEVHNPAGYGVTEAEKAYEDFYAKYDSFDYTRSKDRTFVDV
ENMQTAQLITAEYVLANKTTVVEYPVEILTFNRRNLITKLESFHNPIATP
TS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007138ABM_dom
IPR011008Dimeric_a/b-barrel