Ggra3768.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra3768.t1
Unique NameGgra3768.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length611
Homology
The following BLAST results are available for this feature:
BLAST of Ggra3768.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 190..587
e-value: 1.3E-19
score: 71.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..67
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 207..483

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000850_piloncontigtig00000850_pilon:1510294..1512126 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra3768.t1Ggra3768.t1Gracilaria gracilis GNS1m malemRNAtig00000850_pilon 1510294..1512126 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra3768.t1 ID=Ggra3768.t1|Name=Ggra3768.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=611bp
MSSNASTIASDEELPQLFSTESEIGFPTSVSRSGSDITTPDASSPDTTVS
NELQTPATPPTNAHAGSDASSIGGFGFGSISTLPFFELSPSIRSAIAPPI
PPQAGERVTIMNLPNEVVDLIFRYLSSRPRAKEPLWDTYAHTRNAMSFAL
TNSRFLSLFRARMVSIRTKPERFREDLLYTAPQNGVVIEARSPQDVKHLS
STLCLAGAALRELVLTKNLPNHSWVDGYLKYVTHLRKLSLRDVSPQYPLE
VILEASSRTLRELELVGATGMALSTNQLHAIATHCSSVTSLALRLSMFDH
DWTNVWMGVGPGLKRLSLGATRFWIMDTEEVPLLEQVGRYCADITELHFY
HLGPTLGMACARLCARYGSQLEKLEFEQSQLLRPDLMVIAEGCTAAKLSI
SHGSSLFSHSYNVDVIDMLGGQIQALRYRSQLSHDESLWEIGRQCVQLRE
LRLDSASTLTEQALENILGATAPRLESVSLSFFVRGVERTVASCALRVLA
RKARQLRELYIGGQQMDVATFGRVMAACAATLEQVAVTFGFRTAAERAVV
EADTLVEVVRATHVCARLRSLVVVDRTSRDSRGASAAMRDAVFPLRRRAE
RVSVCGVHFV*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf