Ggra3747.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra3747.t1
Unique NameGgra3747.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length248
Homology
BLAST of Ggra3747.t1 vs. uniprot
Match: A0A2V3IJW6 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJW6_9FLOR)

HSP 1 Score: 373 bits (957), Expect = 9.010e-129
Identity = 166/240 (69.17%), Postives = 183/240 (76.25%), Query Frame = 0
Query:    8 FVAVGLLCYAPALAKSGINPCHGVKSVFGKGVTCEKVEFPVGLCSACKLKPFNPANGFFYDCAAIYDLDDPDCQSKLRHYASMNAHCDPIRLNQVRDFSNGWNRRGLDYFVYSVCEECCDCVPIGARADQHSWRAQNNQLLNSKRGNCPAHAFYDVCAVLPNIRFPKNPGGVDHWDWPKICPLITKWQFSPASKNWLTKSYVNMDWRINRFLVWFFWHNSCGFVDTWKNCVNLEHAQKRV 247
            FVA  L  +  A A+SGINPCH  K+  G GVTC+KV FP GLC ACKLKPFNP NG FYDC +IY+L DP CQ +LR YA   AHCDP+RL Q  DFSN  N R LDYFVYSVCEECCDCVPIG++  ++ WRA  N LL SKRGNCPAHA++D+C VLP IRF KN  G DHWDWP ICPL+TKW FS  S+NWL KSYV MDWRINRFLVWFFW N CG   TWKNCVNLE AQKRV
Sbjct:    6 FVAALLAVWQLAHARSGINPCHDNKAKQGAGVTCQKVVFPEGLCRACKLKPFNPNNGQFYDCTSIYNLTDPQCQQELRLYARWQAHCDPVRLRQTADFSNPSNVRALDYFVYSVCEECCDCVPIGSKTAEYGWRAPTNNLLASKRGNCPAHAYFDICKVLPKIRFSKNINGQDHWDWPMICPLLTKWLFSKNSQNWLKKSYVYMDWRINRFLVWFFWDNRCGNEVTWKNCVNLESAQKRV 245          
BLAST of Ggra3747.t1 vs. uniprot
Match: A0A2V3IQT2 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQT2_9FLOR)

HSP 1 Score: 267 bits (683), Expect = 4.290e-87
Identity = 128/231 (55.41%), Postives = 149/231 (64.50%), Query Frame = 0
Query:   19 ALAKSGINPCHGVKSVFGKGVTCEKVEFPVGLCSACKLKPFNPANGFFYDCAAIYDLDDPDCQSKLRHYASMNAHCDPIRLNQVRDFSNGWNRRGLDYFVYSVCEECCDCVPIGARADQHSWRAQNNQLLNSKRGNCPAHAFYDVCAVLPNIRFPKNPGGVD--HWDWPKICPLITKWQFSPASKNWLTKSYVNMDWRINRFLVWFFWHNSCGFVDTWKNCVNLEHAQKRV 247
            A AKSG+NPCHG K  +G GVTC  V  P  +C+ CKLKP  P +G F DCA+IYDLDDP C+ +LR YA  N HCDP R+ QV+D     NR  LDYFVYSVCEECCDC+P GA A+Q+  R +   L N+ RGNCPAHA YD+C V PNI++    G  D  H DWPKIC  I KW FS   +NWL KS VNMDWRI RFL  F+    C     W  C  LE  Q R+
Sbjct:   17 ATAKSGVNPCHGDKDKYGVGVTCTGVRIPGEMCNQCKLKPHLP-DGQFADCASIYDLDDPACRDQLRIYAQENKHCDPQRVAQVQDMGKYSNRLALDYFVYSVCEECCDCIPRGASANQYQQRLEQGTLGNAYRGNCPAHAHYDICRVFPNIKYTMKAGVEDDTHEDWPKICWHIGKWIFSRDGRNWLYKSNVNMDWRIARFLENFWDDVGCWRQTIWTECTGLEGDQGRL 246          
BLAST of Ggra3747.t1 vs. uniprot
Match: R7QF16 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QF16_CHOCR)

HSP 1 Score: 217 bits (553), Expect = 2.150e-67
Identity = 104/231 (45.02%), Postives = 138/231 (59.74%), Query Frame = 0
Query:   19 ALAKSGINPCHGVKSVFGKGVTCEKVEFPVGLCSACKLKPFNPANGFFYDCAAIYDLDDPDCQSKLRHYASMNAHCDPIRLNQVRDFSNGWNRRGLDYFVYSVCEECCDCVPIGARADQHSWR--AQNNQLLNSKRGNCPAHAFYDVCAVLPNIRFPKNPGGVDHWDWPKICPLITKWQFSPASKNWLTKSYVNMDWRINRFLVWFFWHNSCGFVDTWKNCVNLEHAQKRV 247
            A +KSG NPCH  + V   GV CE +  P G+C  C+L  ++ + G F DC AIY + +P C+S++  Y+ +N  CD +R  Q+ DF +  NR+ LDYFVYSVCEECCDC+P GAR+ Q+  R  A+   L +  RGNCPAHA YD+C V P IR    PGG      PK CP I +W FSPASK W  +   ++   +  FL  F     C    TW+ C +LE AQ+R+
Sbjct:   18 ASSKSGKNPCHPNRRVESLGVPCEGIYLPPGMCDNCELSAYD-SRGNFNDCQAIYKIGEPACRSQIERYSELNP-CDTVRKKQLEDFDDPDNRKALDYFVYSVCEECCDCIPRGARSSQYEERKRARPRTLTSLVRGNCPAHAHYDICRVWPEIRHVTRPGGTLRLGRPKACPKIREWFFSPASKGWAGQDNTDISRDVRNFLGNFNSVARCRRKSTWQRCTDLEVAQRRI 246          
BLAST of Ggra3747.t1 vs. uniprot
Match: A0A2V3IMM0 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMM0_9FLOR)

HSP 1 Score: 202 bits (513), Expect = 9.050e-62
Identity = 94/213 (44.13%), Postives = 125/213 (58.69%), Query Frame = 0
Query:   36 GKGVTCEKVEFPVGLCSACKLKPFNPANGFFYDCAAIYDLDDPDCQSKLRHYASMNAHCDPIRLNQV-RDFSNGWNRRGLDYFVYSVCEECCDCVPIGARADQHSWRAQNNQLLNSKRGNCPAHAFYDVCAVLPNIRFPKNPGGVDHWDWPKICPLITKWQFSPASKNWLTKSYVNMDWRINRFLVWFFWHNSCGFVDTWKNCVNLEHAQKRV 247
            G  VTC  V  P  LCSACKLKP  P  G F DC +I+DL+   C+++L+ Y  +N HCDP+R  QV +  S+G  R+GLDYF+YS+CE+CCDC+P G    Q+ +R    +L N+ RGNCPAHA YDVC V P IR   + G       P +CP +  W  +P + NWL ++ V     +  FL  F     C     W++CV LE  QKR+
Sbjct:    4 GFNVTCGVVALPPRLCSACKLKPILPG-GHFEDCTSIFDLESQSCRAELKEYVRLNKHCDPVRAEQVPKMMSSGGARQGLDYFIYSICEQCCDCIPRGTHISQYGFRESIGKLFNAGRGNCPAHAVYDVCKVWPKIRGVVSAGESRKVSAPMVCPHLKTWLRNPDNANWLHRNQVKYHPAVGNFLNSFIDAAGCSARPFWESCVRLETKQKRL 215          
BLAST of Ggra3747.t1 vs. uniprot
Match: A0A2V3ID26 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ID26_9FLOR)

HSP 1 Score: 177 bits (449), Expect = 6.200e-52
Identity = 92/221 (41.63%), Postives = 117/221 (52.94%), Query Frame = 0
Query:   27 PCHGVKSVFGKGVTCEKVEFPVGLCSACKLKPFNPANGFFYDCAAIYDLDDPDCQSKLRHYASMNAHCDPIRLNQVRDFSNGWNRRGLDYFVYSVCEECCDCVPIGARADQHSWRAQNNQLLNSKRGNCPAHAFYDVCAVLPNIRFPKNPGGVDHWDWPKICPLITKWQFSPASKNWLTKSYVNMDWRINRFLVWFFWHNSCGFVDTWKNCVNLEHAQKRV 247
            PCH  K        C +V  P  LCS C L+     NG F DC +IY+LD P C++KL+ Y  +N  CD  R +QV+ + N  ++  LDYFVYSVCE+CCDC+  GA   Q   R   N+L + +RGNCPAHA YD+C VLPNIR+    G      W   C  +  W  S ASKN+ T     M   I +FL      N CG    W  CV +E  Q  +
Sbjct:   13 PCHMDKQSLNS--MCRQVRLPRELCSKCTLRLVKE-NGGFKDCKSIYNLDAPGCKAKLQRYVDINP-CDGKRASQVKAW-NPTSKMQLDYFVYSVCEQCCDCIYKGATPGQFQRRKNENRLFHPERGNCPAHAVYDICKVLPNIRYMALGGAPFKEGWENTCKDLRMWLRSEASKNFSTNHNAKMSGNIKKFLRSVNVANQCGSETVWTRCVRMERKQMHI 228          
BLAST of Ggra3747.t1 vs. uniprot
Match: R7QE68 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QE68_CHOCR)

HSP 1 Score: 161 bits (408), Expect = 2.240e-46
Identity = 79/185 (42.70%), Postives = 100/185 (54.05%), Query Frame = 0
Query:   72 IYDLDDPDCQSKLRHYASMNAHCDPIRLNQVRDFSNGWNRRGLDYFVYSVCEECCDCVPIGARADQHSWRAQNNQLLNSKRGNCPAHAFYDVCAVLPNIRFPKNPGGVDHWD---------WPKICPLITKWQFSPASKNWLTKSYVNMDWRINRFLVWFFWHNSCGFVDTWKNCVNLEHAQKRV 247
            IYD  +P C+  LR YAS+N  CD  R   VRDFSN  N   LDYF+YSVCE+CCDC+P G +  + + R     L+   R NCPAHA YDVC V PNIR  ++P     W+         WPKICP+I KW  SP  +N   K  +N    + +FL  +     C     W  C  LE +Q R+
Sbjct:    3 IYDTSNPQCRQALRRYASLNP-CDVQRNRHVRDFSNSQNLIALDYFIYSVCEQCCDCIPRGTKPGEFAKRKAAGTLIKVDRANCPAHARYDVCKVWPNIRHLRSP-----WERLPRDLNTLWPKICPIIFKWADSPDGQNLYNKDQINQPASMTQFLTRYVKVAFCSKKAFWNECTALEKSQLRI 181          
BLAST of Ggra3747.t1 vs. uniprot
Match: A0A2V3IEV2 (Desert hedgehog protein A n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEV2_9FLOR)

HSP 1 Score: 168 bits (425), Expect = 2.430e-44
Identity = 91/231 (39.39%), Postives = 116/231 (50.22%), Query Frame = 0
Query:   24 GINPCHGVKSVFGKGVTCEKVEFPVGLCSACKLKPFNPANGFFYDCAAIYDLDDPDCQSKLRHYASMNAHCDPIRLNQVRDFSNGWNRRG--LDYFVYSVCEECCDCVPIG-ARADQHSWRA----QNNQLLNSKRGNCPAHAFYDVCAVLPNIRFPKNPGGVDHWDWPKICPLITKWQFSPASKNWLTKSYVNMDWRINRFLVWFFWHNSCGFVDTWKNCVNLEHAQKRV 247
            G  PCH  KS     VTC  V  P   CS C LKP   +NG F  C  I+ L+ P CQ  L  Y  +N +CDP+R   +  +  G       LDYF+YSVCE CCDCVP+G   AD  + +A    QN  L  + RGNCPAHA YD+C VLP+++    PG  D    P  CP +  W  S  S NW T    ++D  +  FL        C   D W+ C ++E  Q  +
Sbjct:  159 GFFPCHPTKSRKQTEVTCSTVRIPPAFCSRCALKPVT-SNGQFARCDDIFQLETPSCQLALEEYVDLNRNCDPVREQALNAWKAGDASAATQLDYFMYSVCELCCDCVPMGITAADYPALKAAHSEQNPTLWAADRGNCPAHAQYDLCNVLPSVQAFVKPGEPDKV-MPPACPPLNAWLNSARSTNWQTNPDASIDGSVRIFLNDALQALECEREDVWRTCFHMEDLQNHI 387          
BLAST of Ggra3747.t1 vs. uniprot
Match: A0A2V3IVT7 (Protein qua-1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IVT7_9FLOR)

HSP 1 Score: 152 bits (385), Expect = 1.440e-39
Identity = 91/248 (36.69%), Postives = 122/248 (49.19%), Query Frame = 0
Query:    9 VAVGLLCYA--PALAKSGINPCHGVKSVFGKGVTCEKVEFPVGLCSACKLKPFNPANGFFYDCAAIYDLDDPDCQSKLRHYASMNAHCDPIR---LNQVRDFSNGWNRRGLDYFVYSVCEECCDCVPIGAR-------ADQHSWRAQNNQLLNSKRGNCPAHAFYDVCAVLPNIRFPKNPGGVDHWDWPKICPLITKWQFSPASKNWLTKSYVNMDWRINRFLVWFFWHNSCGFVDTWKNCVNLEHAQ 244
            V V +LC +   AL      PCH  K+     V C  V+ P  LC  C L+P    +G F  C  IYD   P C S +R Y + N  CD  R   L+++    +   R  +DYF+YSVCE+CCDCVP+G +       +  HS  A +  L ++ RGNCPAHA YDVC VLP+I         D      ICP + KW  +PA+++W T   V +   I +FL        CG    W +C  +E  Q
Sbjct:    6 VVVAVLCVSLFHALHAKSFFPCHSTKASVHNDVKCTSVKLPPRLCGLCPLRP-TLQDGSFDVCDRIYDTTSPACMSAMRTYVNDNE-CDARRREALDRLEKNGDEDARSEIDYFLYSVCEQCCDCVPMGVKQGDFAQLSKAHS--ASSPTLWSATRGNCPAHARYDVCKVLPSIATFT----ADKSKTKPICPSLNKWINTPAAEDWQTNPEVTLAADIEQFLNGMLVATHCGDAQIWNSCQQMEFKQ 245          
BLAST of Ggra3747.t1 vs. uniprot
Match: R7QFW8 (HintN domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QFW8_CHOCR)

HSP 1 Score: 117 bits (292), Expect = 9.950e-27
Identity = 55/139 (39.57%), Postives = 74/139 (53.24%), Query Frame = 0
Query:  114 LDYFVYSVCEECCDCVPIGARADQHSWRAQNNQ-----LLNSKRGNCPAHAFYDVCAVLPNIRFPKNPGGVDHWDWPKICPLITKWQFSPASKNWLTKSYVNMDWRINRFLVWFFWHNSCGFVDTWKNCVNLEHAQKRV 247
            LDYF+YSVCE+CCDC+P+G R   +   A  +      L    RGNCPAHA +DVC VLPN+R+   PG  +    PKICP + +WQ SP + +W      N++  + RFL        C     W  C  +E  Q  +
Sbjct:    3 LDYFLYSVCEQCCDCIPMGTRRRDYDALASAHSPADPTLWKEDRGNCPAHAQFDVCKVLPNVRYFAKPGDPELVA-PKICPKLREWQKSPEAADWPVNPETNIESDVRRFLNGILVATDCDNKLIWGRCYEMEDKQSNL 140          
BLAST of Ggra3747.t1 vs. uniprot
Match: A0A7S3ZCA3 (Hypothetical protein (Fragment) n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3ZCA3_9EUKA)

HSP 1 Score: 105 bits (262), Expect = 3.320e-22
Identity = 63/198 (31.82%), Postives = 95/198 (47.98%), Query Frame = 0
Query:   64 GFFYDCAAIYDLDDPDCQSKLRHYASMNAHCDPIRLNQVRDFSNGWNR-------RGLDYFVYSVCEECCDCVPIGARADQHSWRAQNNQLLNSKRGNCPAHAFYDVCAVLPNIRF--PKNPGGVDHWDWPKICPLITKWQFSPASKNWLTKSYVNM----DWRINRFLVWFFWHN-SCGFVDTWKNCVNLEHAQKRV 247
            G F DCAA++D+    C ++L+ Y   N  CD  R + +    NG N         GLD+FVY++CE CCDC+P G   D  S         N  RGNC AH  +D C++ PN+ +  P  P          +CP +  ++  P  +N+L + Y +      +RI    +   W+   C  V  ++ C +LE AQ R+
Sbjct:   48 GEFKDCAAMFDVATDGCLAELQKYVDDNV-CDDKRRDFLSIVKNGPNHPNYATAVEGLDFFVYAMCEACCDCIPFGGHRDDSSQ-------YNIHRGNCYAHPRFDTCSLFPNLTWIGPNKPPNA-----APVCPALEDFEAGPG-RNFLLQEYQHEFEEPRYRIIPPFLESMWNGLHCSAVGAYQQCFDLECAQNRI 231          
The following BLAST results are available for this feature:
BLAST of Ggra3747.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
A0A2V3IJW69.010e-12969.17Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IQT24.290e-8755.41Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QF162.150e-6745.02Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3IMM09.050e-6244.13Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3ID266.200e-5241.63Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QE682.240e-4642.70Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3IEV22.430e-4439.39Desert hedgehog protein A n=1 Tax=Gracilariopsis c... [more]
A0A2V3IVT71.440e-3936.69Protein qua-1 n=1 Tax=Gracilariopsis chorda TaxID=... [more]
R7QFW89.950e-2739.57HintN domain-containing protein n=1 Tax=Chondrus c... [more]
A0A7S3ZCA33.320e-2231.82Hypothetical protein (Fragment) n=1 Tax=Lotharella... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..247
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000850_piloncontigtig00000850_pilon:1296349..1297092 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra3747.t1Ggra3747.t1Gracilaria gracilis GNS1m malemRNAtig00000850_pilon 1296349..1297092 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra3747.t1 ID=Ggra3747.t1|Name=Ggra3747.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=248bp
MRAVLLLFVAVGLLCYAPALAKSGINPCHGVKSVFGKGVTCEKVEFPVGL
CSACKLKPFNPANGFFYDCAAIYDLDDPDCQSKLRHYASMNAHCDPIRLN
QVRDFSNGWNRRGLDYFVYSVCEECCDCVPIGARADQHSWRAQNNQLLNS
KRGNCPAHAFYDVCAVLPNIRFPKNPGGVDHWDWPKICPLITKWQFSPAS
KNWLTKSYVNMDWRINRFLVWFFWHNSCGFVDTWKNCVNLEHAQKRV*
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