Ggra3737.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra3737.t1
Unique NameGgra3737.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length913
Homology
BLAST of Ggra3737.t1 vs. uniprot
Match: A0A2V3IJY9 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJY9_9FLOR)

HSP 1 Score: 1159 bits (2997), Expect = 0.000e+0
Identity = 582/877 (66.36%), Postives = 695/877 (79.25%), Query Frame = 0
Query:   25 MTRKRPSPQVSDTPKRARCGRRPDVKHEAFPSWLQNAAAAFVNTTPPLKWTGSFYSWAIWLDTLRDQSLWTSTHKGQPPWRQLVDVCRKSGQVCGTAALYRAKNDLVSAIINLGYRRGEAQRITIAKQKPAVEREIMRRVRAVITRQRRHEAASLTLIRYLDLAFVFSAYKDCRLSQVPKESFAEVSRQVEDELNFLEAKPSAKQTGALTQRMESYMWQHRWLPWYEQVPHMKDAMLISAREAALAFCNGLPCPKFGFGTGVRGLSRDHLAGAGIMDEWLITLFDDSISPRWRRLAEVYEEATNDWRGEENKLLEEISRRVIERILEPLIEMNDSLDADHCKLVDATPGIVVTQSARIRGRFTFRLLVELHVHLIMFCEYLHKKFHGRMLPSIEDIHPGVLLFDELSRRIAEVRTHLDDEKAELLIISCLRAPELHDPHTHPSREALQSCKDYQTAAIKAALGPAIMLGCKMPDELAEAETVSESDPLMFAAIIAEWDPILAARIVDAAVRIGKNTREQFLQGGGCGLDIYTHRRVLVCDAAIDRCRGDHRAAAEIMMRLEPVWDACCNDKDIGSFSPDGVLLLKVAVERGNFEAATAFGNFIGEEQWETHRNACGVERDNEAAINYLCRALTAGDVGAARSLIHLLCNPELYRSASDAQKVNNKRVNFSQELVKKARESLEVAARHVPAIALYLGYLQAVGTNGLETDCNSAMGCYKRVLLSNKVNTRFKAHAANNIAVLKALHCIPGDAEYEDVRVCHFLRTAAAATNRKAGANLAALTTVASNAGEPDLDRAVEMYQQIFRSSAEGSPVTVIQADEEKMEVTVMELNIGKDKQDMFCQDLKAGGKNLEKYGKLMAWETVPYTLAKEARVEAGKK 901
            MTRKR +P  SD PKRARCG R DVK EA P WL +AAAAFVN TPPLKWTG FYSW  WLDTLR+QSLWTS    + PW QLV+ CR S  V GTAALYRAKNDLVSAII++ YR GE  R++ ++QKPA ER+IMRR+RAV+TRQRRHEAAS+TLIRYLDLAFVFSAY+DCRL+   +E+ A  +R VE EL FL++KPSAKQT A TQRMESYMWQHRWLPWY+Q+PHM + +LISAREAA AFC+GL CPKF  GTGVRGLSRDHLAG GIMDEWL+TLFD+ +SPRWRRLA VYE A  DWRGEE KL+EEISRRVIERILEPL E++D LD+DHCKLVDATPGIVVTQSA+ RGRFTFRLLVEL++HLIMFCE+LH +FHG++LPSIEDIHP VLLFDELSRR+A+VRTHL+ ++AE L  SCLRAP+LH+ +THPS EALQ+CKDYQTAAIKAALGP+ +  C   +E  E E VSESDPLMFAAI+AEWDP LAARI+DAAVRIGK  RE+FL G  C LD+YTHRR +VCDAAIDRC G+ RAAAEIM +L PVW     DK +GSF+ DG+LLLKVAVERGNFEAA A G FIG+EQWE HR ACGV+RD  A I YLCRA+ AGDVGA+R +IHL+CN     + + + K +++      ELV+K RE LE+AAR VPAIALYLGYL +VG  G+E+DC  AMG YKRVL SNKVNT FKAHAANN A+LKALHC   D E + + V  +LRTA    N KA +NLAAL T A+ A E +L +A +MY+++F+++ +   V+VIQ      E+ V EL +  + Q+ FC+DLK+ G +L++YG+++A ET+ Y+  K  + EA K+
Sbjct:    1 MTRKRTAPLTSDPPKRARCGPRSDVKQEAVPFWLHDAAAAFVNATPPLKWTGGFYSWGTWLDTLRNQSLWTSEPHTKTPWHQLVEACRISDHVRGTAALYRAKNDLVSAIISIVYRCGETLRLSDSEQKPAAERDIMRRIRAVVTRQRRHEAASITLIRYLDLAFVFSAYRDCRLAHASRETLAHANRDVEQELLFLQSKPSAKQTAAATQRMESYMWQHRWLPWYQQMPHMSNDLLISAREAAHAFCDGLHCPKFDVGTGVRGLSRDHLAGTGIMDEWLVTLFDEPVSPRWRRLAHVYESAVKDWRGEEGKLMEEISRRVIERILEPLTEISDGLDSDHCKLVDATPGIVVTQSAKKRGRFTFRLLVELNIHLIMFCEHLHARFHGKILPSIEDIHPAVLLFDELSRRVAQVRTHLEPDQAERLFASCLRAPDLHNAYTHPSAEALQNCKDYQTAAIKAALGPSRIASCTKSEEFPEVENVSESDPLMFAAIVAEWDPQLAARIIDAAVRIGKKKREEFLNGHECSLDLYTHRRTVVCDAAIDRCLGNRRAAAEIMNKLRPVWSVFEGDKGVGSFTRDGLLLLKVAVERGNFEAAVALGIFIGDEQWEDHRQACGVQRDYAAGIEYLCRAVLAGDVGASRDVIHLVCNQIAPMNGAPSLKGDSR-----CELVQKVRECLEIAARDVPAIALYLGYLHSVGAPGVESDCKFAMGYYKRVLQSNKVNTEFKAHAANNTAILKALHCDSIDCE-DGITVAQYLRTAGIVGNPKADSNLAALMT-ANAAEEAELRKAAQMYERVFQANGKEVAVSVIQNSGGGTEMNVFELLVKNEMQEAFCRDLKSEGMDLQRYGRVLANETIAYS-TKAVKAEAEKR 869          
BLAST of Ggra3737.t1 vs. uniprot
Match: R7QT41 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QT41_CHOCR)

HSP 1 Score: 776 bits (2005), Expect = 1.440e-267
Identity = 417/847 (49.23%), Postives = 548/847 (64.70%), Query Frame = 0
Query:   49 VKHEAFPSWLQNAAAAFVNTTPPLKWTGSFYSWAIWLDTLRDQSLWTSTHKGQ---PPWRQLVDVCRKSGQVCGTAALYRAKNDLVSAIINLGYRRGEAQRITIAKQKPAVEREIMRRVRAVITRQRRHEAASLTLIRYLDLAFVFSAYKDCRLSQVP--KESFAEVSRQVEDELNFLEAKPSAKQTGALTQRMESYMWQHRWLPWYEQVPHMKDAMLISAREAALAFCNGLPCPKFGFGTGVRGLSRDHLAGAGIMDEWLITLFDDSISPRWRRLAEVYEEATNDWRGEENKLLEEISRRVIERILEPLIEMNDSLDADHCKLVDATPGIVVTQSARIRGRFTFRLLVELHVHLIMFCEYLHKKFHGRMLPSIEDIHPGVLLFDELSRRIAEVRTHLDDEKAELLIISCLRAPELHDPHTHPSREALQSCKDYQTAAIKAALGPAIMLGCKMPDELAEAETVSESDPLMFAAIIAEWDPILAARIVDAAVRIGKNTREQFLQGGGCGLDIYTHRRVLVCDAAIDRCRGDHRAAAEIMMRLEPVWDACCNDKDIGSFSPDGVLLLKVAVERGNFEAATAFGNFIGEEQWETHRNACGVERDNEAAINYLCRALTAGDVGAARSLIHLLCNPELYRSASDAQKVNNKRVNFSQELVKKARESLEVAARHVPAIALYLGYLQAVGTNGLETDCNSAMGCYKRVLLSNKVNTRFKAHAANNIAVLKALHCIPG--DAEYEDVRVCHFLRTAAAATNRKAGANLAALTTVASNAGEPDLDRAVEMYQQIFRSSAEGSPVTVIQADEEKMEVTVMELNIGKDKQDMFCQDLKAGGKNLEKYGKLMAWETVPY 888
             K EA P WL  AA AFV  TP L+WTG FYSW  WLD LR  S+WT+T +     PPWR L+D C+ S QV GTAALY AK+DLV+ IINL +R+GE QR+T   +  A ER++MRRVRAV+TRQRRHEA SLTLIR+LDLAFVFSA+KDCR++       S  +V+  VE EL FL  KPSAK+   LT RME YMW +RWLPWYEQVP ++D M+I AREAALAFC GLP P+  FGTGVRGLSRDHLAG+  MDEWL+ L D S S RW RL+ +YE A  D RGEE+ LLEE SRRV++ +LEPL E+ + LD+ H KLVDA PGI+V+QS  I GRFTFR L+EL++HL MF EYLH  + GR LPSI++IH G +L++E+ RR+ EVR  ++ +K + L+  CL   EL++        AL+    YQ  A+KAA G AI+     P+       + ++DPL +AAI+AEWDP LAA+IVDAAVRIG   R +F  G   GLD+YT+RRV+VCDAA  R  GD +AAA  M RL PVWD C  DK  G F   GV+ L+ A E GNFEA+  +G F+    W   R  CG+  D E  I ++C+A+  GD  AA  L+HLL         S+  +++      + +LV  + + L+ A R  P++ L++GYL ++G   +  DC  A   Y+ VL S   + RF+A+AANN+ VL+ L+  PG   A  E  +   F+R +A+A + KA +NL AL  + S+     L+ A + Y Q   +    +PVT IQA  +  EV V ++ I    ++ FC++L+A G  +E+YG ++  ETVPY
Sbjct:   35 TKPEAVPQWLNEAATAFVARTPTLRWTGGFYSWGTWLDDLRQLSVWTTTPENTNIAPPWRILIDACKASRQVRGTAALYAAKSDLVNIIINLVFRKGEEQRLTHVNETAAAERDVMRRVRAVVTRQRRHEALSLTLIRFLDLAFVFSAFKDCRVAGAIALNRSAEQVAADVEAELLFLNRKPSAKEIRDLTNRMEQYMWDNRWLPWYEQVPGVRDDMVIRAREAALAFCKGLPFPQIRFGTGVRGLSRDHLAGSKSMDEWLLLLLDPSQSERWSRLSVIYESAVRDERGEEDPLLEETSRRVLQTVLEPLTELREGLDSAHSKLVDAAPGIIVSQSVNIPGRFTFRQLLELYIHLSMFGEYLHTTYRGRALPSIDEIHTGAVLYEEIRRRVWEVRCVINADKMDTLLTWCLATQELYN-----GMPALERRISYQQIAVKAAFGSAIIRHAANPNAPFPEPFIMQNDPLSYAAIVAEWDPPLAAKIVDAAVRIGPAIRARFESGHSDGLDLYTYRRVVVCDAARQRSAGDLQAAARTMARLHPVWDVCEPDKAYGPFDMRGVMRLQAAAEEGNFEASAVYGCFLCSLDWIDRRRQCGIPEDMERGIRFICKAVALGDTAAAADLMHLLL--------SNPTRIDGHIWEMTPQLVWHSVQCLKEAVREEPSMRLFVGYLYSLGATDVPVDCRVAAKAYQCVLESVTSSPRFQAYAANNLGVLRLLNT-PGASSALPEANKAFEFIRASASAADPKAESNLGALLCLESSDSYQQLEMAKQTYWQCLSNRDYNNPVTTIQARRDTSEVNVYKMRIAPQLREKFCRELRAEGMVMERYGTVLETETVPY 867          
The following BLAST results are available for this feature:
BLAST of Ggra3737.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IJY90.000e+066.36Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QT411.440e-26749.23Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 427..447
NoneNo IPR availableCOILSCoilCoilcoord: 204..224
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 7..32
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 33..48
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..48
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 601..839
e-value: 3.9E-9
score: 37.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000850_piloncontigtig00000850_pilon:1262479..1265217 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra3737.t1Ggra3737.t1Gracilaria gracilis GNS1m malemRNAtig00000850_pilon 1262479..1265217 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra3737.t1 ID=Ggra3737.t1|Name=Ggra3737.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=913bp
MLMVENAPPSSHSTPAQDAHQSPSMTRKRPSPQVSDTPKRARCGRRPDVK
HEAFPSWLQNAAAAFVNTTPPLKWTGSFYSWAIWLDTLRDQSLWTSTHKG
QPPWRQLVDVCRKSGQVCGTAALYRAKNDLVSAIINLGYRRGEAQRITIA
KQKPAVEREIMRRVRAVITRQRRHEAASLTLIRYLDLAFVFSAYKDCRLS
QVPKESFAEVSRQVEDELNFLEAKPSAKQTGALTQRMESYMWQHRWLPWY
EQVPHMKDAMLISAREAALAFCNGLPCPKFGFGTGVRGLSRDHLAGAGIM
DEWLITLFDDSISPRWRRLAEVYEEATNDWRGEENKLLEEISRRVIERIL
EPLIEMNDSLDADHCKLVDATPGIVVTQSARIRGRFTFRLLVELHVHLIM
FCEYLHKKFHGRMLPSIEDIHPGVLLFDELSRRIAEVRTHLDDEKAELLI
ISCLRAPELHDPHTHPSREALQSCKDYQTAAIKAALGPAIMLGCKMPDEL
AEAETVSESDPLMFAAIIAEWDPILAARIVDAAVRIGKNTREQFLQGGGC
GLDIYTHRRVLVCDAAIDRCRGDHRAAAEIMMRLEPVWDACCNDKDIGSF
SPDGVLLLKVAVERGNFEAATAFGNFIGEEQWETHRNACGVERDNEAAIN
YLCRALTAGDVGAARSLIHLLCNPELYRSASDAQKVNNKRVNFSQELVKK
ARESLEVAARHVPAIALYLGYLQAVGTNGLETDCNSAMGCYKRVLLSNKV
NTRFKAHAANNIAVLKALHCIPGDAEYEDVRVCHFLRTAAAATNRKAGAN
LAALTTVASNAGEPDLDRAVEMYQQIFRSSAEGSPVTVIQADEEKMEVTV
MELNIGKDKQDMFCQDLKAGGKNLEKYGKLMAWETVPYTLAKEARVEAGK
KSQSPSIKRGLS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf