Ggra3707.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra3707.t1
Unique NameGgra3707.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length362
Homology
BLAST of Ggra3707.t1 vs. uniprot
Match: A0A2V3IUV9 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUV9_9FLOR)

HSP 1 Score: 473 bits (1216), Expect = 1.370e-164
Identity = 234/335 (69.85%), Postives = 283/335 (84.48%), Query Frame = 0
Query:    1 MMLAARLRSRHECHPSTEVQTLASHPLPTAPPREIDAARIATLEGLPTELVLERARLVSQAPSQMPYIGIFGKYNKRWYVDIVTLPHNALRCLVSSVFELLSASHRLALDMTESDFEQLFTFLAEFDHFTRVVFDAEQKILFPEVEHALKKRPDYTTHALHPTLRATTISTIHALLDKLTDKSLNETPSLTVIHILRTTMDKLSTQLLDYFAVKETVLPRILFRSYRGAKEKNRMEARLIKFFEEASHQYYYTALLTLPLNNEQVRLDFEERHFPKPNHRQQYRDAVNIVQTTLMAIPAQFQHAARQYEQCFSMKTFVEKYGTDRDHHVTTQLVE 335
            M+LA+RLRSRHE   S ++  LAS P P+  PREI AA IAT+E LPTE+VLERARLVS+AP++MPYIGI+GKYNKRWYVDIVTLP NA+RCLVS+ FEL+ A+HRLALDMT  DF+QLF FL+EFDHF RV+FD+E+K+L+PE+EHALKKR DY+T ALHP+ RA T + +HALL++LTD+ L  TPS+T I +L+ TMD LSTQLLDYF VKE  LPR+ FRS+RG KEKNRME RLI++FE+A+++YYY+ALLTLPLNNEQVRLDFEERHF + N R+ YR AVN VQ TL+AIP +F+ AAR YEQ FS+KTFVEKYGTDRD H TTQLV+
Sbjct:    1 MVLASRLRSRHERKRSQQIHALASLPQPSDAPREIQAATIATIEELPTEVVLERARLVSEAPARMPYIGIYGKYNKRWYVDIVTLPDNAIRCLVSAAFELIGAAHRLALDMTVPDFDQLFAFLSEFDHFIRVIFDSEEKVLYPEMEHALKKRADYSTFALHPSSRAATRAHVHALLNQLTDEELRHTPSVTAIRLLQQTMDSLSTQLLDYFNVKECTLPRVFFRSFRGCKEKNRMETRLIRYFEDANNEYYYSALLTLPLNNEQVRLDFEERHFARQNKRESYRHAVNAVQGTLLAIPRRFEQAARSYEQRFSVKTFVEKYGTDRDQHATTQLVD 335          
BLAST of Ggra3707.t1 vs. uniprot
Match: R7QKI7 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QKI7_CHOCR)

HSP 1 Score: 337 bits (865), Expect = 1.240e-111
Identity = 181/334 (54.19%), Postives = 237/334 (70.96%), Query Frame = 0
Query:    1 MMLAARLRSRHECHPSTEVQTLASHPLPTAPPREIDAARIATLEGLPTELVLERARLVSQAPSQMPYIGIFGKYNKRWYVDIVTLPHNALRCLVSSVFELLSASHRLALDMTESDFEQLFTFLAEFDHFTRVVFDAEQKILFPEVEHALKKRPDYTTHALHPTLRATTISTIHALLDKLTDKSLNETPSLTVIHILRTTMDKLSTQLLDYFAVKETVLPRILFRSYRGAKEKNRMEARLIKFFEEASHQYYYTALLTLPLNNEQVRLDFEERHFPKPNHRQQYRDAVNIVQTTLMAIPAQFQHAARQYEQCFSMKTFVEKYGTDRDHHVTTQLV 334
            M +  +L+S    HPS    T    P PTAPP  I+AAR++ ++ L  E +LER+RLVS AP++MPYIG  GKYNKRWYVDIV+LPHN++R L+S VF LL++ HRLALDMT +DF+ LF FLAEF  +T  +  AE ++++PEVE AL+KRPDY  H LHPT RA   + I  LL  LTD +L+   ++ V + L+ T+D+LS QLLDYF+ +E VLPRI   S RG++EKN+MEA+LIK+F +A H++YYTALL LPL++++VR DFEERHF KP    Q+R AV  VQ +L+AIP  F  AA  YE  FSM  F+E YG DRD   TT ++
Sbjct:    5 MQIKEKLKS--SSHPSPISDT--PPPTPTAPPT-IEAARVSQMD-LDRECILERSRLVSIAPARMPYIGFHGKYNKRWYVDIVSLPHNSVRTLISEVFGLLTSVHRLALDMTRADFDNLFLFLAEFQAYTAALLAAEDRLVYPEVEAALRKRPDYAAHVLHPTHRAERKNDIARLLAALTDPTLHYLQAVAVANTLQATVDELSRQLLDYFSAQEAVLPRIFAHSMRGSREKNKMEAKLIKYFADAGHEFYYTALLALPLHSQEVRADFEERHFAKPARAHQFRTAVKRVQDSLIAIPRAFDAAASDYETKFSMAAFLENYGKDRDVDATTTMI 332          
BLAST of Ggra3707.t1 vs. uniprot
Match: R7QIK0 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QIK0_CHOCR)

HSP 1 Score: 132 bits (332), Expect = 1.280e-31
Identity = 88/280 (31.43%), Postives = 145/280 (51.79%), Query Frame = 0
Query:   65 MPYIGIFG-KYNKRWYVDIVTLPHNALRCLVSSVFELLSASHRLALDMTESDFEQLFTFLAEFDHFTRVVFDAEQKILFPEVEHALKKRPDYTTHALH-PTLRA--------TTISTIHALLDKLTDKSLNETPSLTVIHILRTTMDKLSTQLLDYFAVKETVLPRILFRSYR-GAKEKNRMEARLIKFFEEASHQYYYTALLTLPLNNEQVRLDFEERHFPKPNHRQQYRDAVNIVQTTLMAIPAQFQHAARQYEQCFSMKTFVEKYGTDRDHHVTTQL 333
            MP +  FG ++  +WYVD+V LPHNA+RC + + F + +A  +LALD+ E+D  +++ +L   D F   +  AE + ++P V+  L+K        LH P L +        T I  + A   K  D +   T +   I+ LR  +D+L   LLDYFA  E  +P++L ++ R G KEK+++E ++ ++     H     ALL   + +   R +F  R+  K N R  ++  V  V+ + M +   F   A +YE+ F+M TFV+ Y  + D +    L
Sbjct:    1 MPAVAYFGARFGDKWYVDLVALPHNAIRCQLRAAFIIANALGKLALDVGEADLARVYAWLGTLDRFVAALLTAEDRFVYPLVDANLRKAKTPEGAQLHLPELLSLRGRDVAKTRIRELLADARKTRDVATGATRA--KINALRFALDQLGANLLDYFAAMEKFVPKLLKKALRNGPKEKDKVEKKMFEYLYAQPHGAMLGALLLQCIESRSRRAEFVNRNIRKKNDRASFKLHVKKVEASHMRLALAFDDVANKYERRFNMSTFVKHYDANTDGYAQETL 278          
BLAST of Ggra3707.t1 vs. uniprot
Match: A0A2V3IVC6 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IVC6_9FLOR)

HSP 1 Score: 122 bits (306), Expect = 4.920e-28
Identity = 88/294 (29.93%), Postives = 148/294 (50.34%), Query Frame = 0
Query:   52 LERARLVSQAPSQMPYIGIFG-KYNKRWYVDIVTLPHNALRCLVSSVFELLSASHRLALDMTESDFEQLFTFLAEFDHFTRVVFDAEQKILFPEVEHALKKRPDYTTHALH-PTL-----RATTISTIHALLD---KLTDKSLNETPSLTVIHILRTTMDKLSTQLLDYFAVKETVLPRILFRSYR-GAKEKNRMEARLIKFFEEASHQYYYTALLTLPLNNEQVRLDFEERHFPKPNHRQQYRDAVNIVQTTLMAIPAQFQHAARQYEQCFSMKTFVEKYGTDRDHHVTTQLV 334
            +ERA++V  +  +MP +G FG +Y  +WYVD+V LPHNA+R  +   F + +A   L LD+ + D  +++ +L   + F R VF+AE + + P ++  + K        L+ P L     R T    I  LL    K  D +  E  S+  I+ LR  +D+    +LDYFA  E + P++  R+ R G +++ ++E ++ +F           AL    + +   R  F ER+  K   R  +   V  VQ T M + A F+ AA +YE+ F++  F++ Y    D  +T  ++
Sbjct:   39 MERAKVVMTSSPRMPAVGYFGGRYGHKWYVDLVALPHNAIRRQLCDAFIMANALGTLQLDVADGDLARVYAWLGTLESFVRAVFNAEARFILPLLDANVVKASSSDGKQLYLPELISVRGRVTAQQRIFDLLKTARKTRDVATGE--SVAKINALRYALDQFGANVLDYFAAIEKIAPKLFKRTLRNGQRQQIKLEHKMFEFVHRHEQGAMLAALFMQCIESRTTRQAFLERNLKK-RQRGDFIVDVKRVQNTHMRLAAAFEDAAAKYEKRFNVNKFLQHYDAQGDSKMTLAML 329          
The following BLAST results are available for this feature:
BLAST of Ggra3707.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3IUV91.370e-16469.85Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QKI71.240e-11154.19Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R7QIK01.280e-3131.43Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3IVC64.920e-2829.93Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 337..361

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000850_piloncontigtig00000850_pilon:1153482..1154567 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra3707.t1Ggra3707.t1Gracilaria gracilis GNS1m malemRNAtig00000850_pilon 1153482..1154567 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra3707.t1 ID=Ggra3707.t1|Name=Ggra3707.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=362bp
MMLAARLRSRHECHPSTEVQTLASHPLPTAPPREIDAARIATLEGLPTEL
VLERARLVSQAPSQMPYIGIFGKYNKRWYVDIVTLPHNALRCLVSSVFEL
LSASHRLALDMTESDFEQLFTFLAEFDHFTRVVFDAEQKILFPEVEHALK
KRPDYTTHALHPTLRATTISTIHALLDKLTDKSLNETPSLTVIHILRTTM
DKLSTQLLDYFAVKETVLPRILFRSYRGAKEKNRMEARLIKFFEEASHQY
YYTALLTLPLNNEQVRLDFEERHFPKPNHRQQYRDAVNIVQTTLMAIPAQ
FQHAARQYEQCFSMKTFVEKYGTDRDHHVTTQLVENVSQANSPTNPSDTP
VSAEQQATDQM*
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