Ggra3707.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra3707.t1
Unique NameGgra3707.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length362
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000850_piloncontigtig00000850_pilon:1153482..1154567 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra3707Ggra3707Gracilaria gracilis GNS1m malegenetig00000850_pilon 1153482..1154567 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3707.t1.start1Ggra3707.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000850_pilon 1153482..1153484 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3707.t1.CDS1Ggra3707.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000850_pilon 1153482..1154567 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3707.t1.exon1Ggra3707.t1.exon1Gracilaria gracilis GNS1m maleexontig00000850_pilon 1153482..1154567 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3707.t1.stop1Ggra3707.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000850_pilon 1154565..1154567 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3707.t1Ggra3707.t1Gracilaria gracilis GNS1m malepolypeptidetig00000850_pilon 1153482..1154567 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra3707.t1 ID=Ggra3707.t1|Name=Ggra3707.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=362bp
MMLAARLRSRHECHPSTEVQTLASHPLPTAPPREIDAARIATLEGLPTEL
VLERARLVSQAPSQMPYIGIFGKYNKRWYVDIVTLPHNALRCLVSSVFEL
LSASHRLALDMTESDFEQLFTFLAEFDHFTRVVFDAEQKILFPEVEHALK
KRPDYTTHALHPTLRATTISTIHALLDKLTDKSLNETPSLTVIHILRTTM
DKLSTQLLDYFAVKETVLPRILFRSYRGAKEKNRMEARLIKFFEEASHQY
YYTALLTLPLNNEQVRLDFEERHFPKPNHRQQYRDAVNIVQTTLMAIPAQ
FQHAARQYEQCFSMKTFVEKYGTDRDHHVTTQLVENVSQANSPTNPSDTP
VSAEQQATDQM*
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spliced messenger RNA

>Ggra3707.t1 ID=Ggra3707.t1|Name=Ggra3707.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1086bp|location=Sequence derived from alignment at tig00000850_pilon:1153482..1154567+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGATGCTGGCGGCTCGTCTTCGCAGCCGCCATGAATGTCACCCATCCAC
GGAGGTGCAGACCCTCGCCTCGCATCCGCTACCAACTGCACCGCCTCGCG
AGATAGACGCTGCTAGAATTGCCACGCTGGAGGGACTGCCCACTGAGCTC
GTGTTGGAGCGCGCTCGTCTCGTGTCTCAGGCACCTTCTCAAATGCCTTA
CATTGGCATTTTTGGCAAGTACAACAAACGATGGTATGTTGATATCGTCA
CCTTGCCGCATAATGCGCTTCGCTGCCTTGTCTCGAGCGTGTTTGAGTTG
CTTTCCGCTTCGCATCGATTGGCGCTTGATATGACCGAGTCCGACTTTGA
GCAGTTGTTCACCTTTCTGGCTGAGTTTGATCACTTCACCCGCGTTGTGT
TCGACGCTGAGCAGAAGATTCTGTTTCCTGAAGTGGAGCATGCGCTTAAG
AAACGCCCTGATTACACCACACATGCGCTTCATCCCACCCTTCGTGCAAC
AACAATCTCTACAATTCATGCGCTTCTTGACAAGTTGACGGACAAATCTC
TCAACGAGACTCCCAGTCTAACTGTCATTCACATCCTTCGAACCACCATG
GACAAACTGTCCACACAACTGCTGGACTACTTTGCCGTCAAAGAAACAGT
TCTGCCTCGCATTCTGTTCCGTTCGTACCGCGGAGCAAAGGAAAAGAATC
GAATGGAAGCACGGCTGATAAAGTTTTTTGAAGAAGCCAGTCATCAGTAT
TACTACACCGCTTTATTGACGTTGCCGCTTAACAATGAACAGGTACGCCT
CGATTTTGAAGAGCGTCATTTCCCCAAGCCCAATCACCGTCAACAATATC
GTGACGCTGTGAACATTGTACAAACCACATTGATGGCAATTCCAGCTCAG
TTTCAACACGCCGCTCGACAATATGAACAATGCTTCTCCATGAAGACTTT
TGTAGAGAAATATGGAACTGATCGTGATCATCATGTAACCACTCAGCTTG
TCGAAAACGTCTCTCAAGCCAACAGCCCAACCAATCCATCTGACACACCG
GTTTCGGCAGAACAACAAGCCACCGATCAAATGTGA
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protein sequence of Ggra3707.t1

>Ggra3707.t1 ID=Ggra3707.t1|Name=Ggra3707.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=362bp
MMLAARLRSRHECHPSTEVQTLASHPLPTAPPREIDAARIATLEGLPTEL
VLERARLVSQAPSQMPYIGIFGKYNKRWYVDIVTLPHNALRCLVSSVFEL
LSASHRLALDMTESDFEQLFTFLAEFDHFTRVVFDAEQKILFPEVEHALK
KRPDYTTHALHPTLRATTISTIHALLDKLTDKSLNETPSLTVIHILRTTM
DKLSTQLLDYFAVKETVLPRILFRSYRGAKEKNRMEARLIKFFEEASHQY
YYTALLTLPLNNEQVRLDFEERHFPKPNHRQQYRDAVNIVQTTLMAIPAQ
FQHAARQYEQCFSMKTFVEKYGTDRDHHVTTQLVENVSQANSPTNPSDTP
VSAEQQATDQM*
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mRNA from alignment at tig00000850_pilon:1153482..1154567+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra3707.t1 ID=Ggra3707.t1|Name=Ggra3707.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1086bp|location=Sequence derived from alignment at tig00000850_pilon:1153482..1154567+ (Gracilaria gracilis GNS1m male)
ATGATGCTGGCGGCTCGTCTTCGCAGCCGCCATGAATGTCACCCATCCAC
GGAGGTGCAGACCCTCGCCTCGCATCCGCTACCAACTGCACCGCCTCGCG
AGATAGACGCTGCTAGAATTGCCACGCTGGAGGGACTGCCCACTGAGCTC
GTGTTGGAGCGCGCTCGTCTCGTGTCTCAGGCACCTTCTCAAATGCCTTA
CATTGGCATTTTTGGCAAGTACAACAAACGATGGTATGTTGATATCGTCA
CCTTGCCGCATAATGCGCTTCGCTGCCTTGTCTCGAGCGTGTTTGAGTTG
CTTTCCGCTTCGCATCGATTGGCGCTTGATATGACCGAGTCCGACTTTGA
GCAGTTGTTCACCTTTCTGGCTGAGTTTGATCACTTCACCCGCGTTGTGT
TCGACGCTGAGCAGAAGATTCTGTTTCCTGAAGTGGAGCATGCGCTTAAG
AAACGCCCTGATTACACCACACATGCGCTTCATCCCACCCTTCGTGCAAC
AACAATCTCTACAATTCATGCGCTTCTTGACAAGTTGACGGACAAATCTC
TCAACGAGACTCCCAGTCTAACTGTCATTCACATCCTTCGAACCACCATG
GACAAACTGTCCACACAACTGCTGGACTACTTTGCCGTCAAAGAAACAGT
TCTGCCTCGCATTCTGTTCCGTTCGTACCGCGGAGCAAAGGAAAAGAATC
GAATGGAAGCACGGCTGATAAAGTTTTTTGAAGAAGCCAGTCATCAGTAT
TACTACACCGCTTTATTGACGTTGCCGCTTAACAATGAACAGGTACGCCT
CGATTTTGAAGAGCGTCATTTCCCCAAGCCCAATCACCGTCAACAATATC
GTGACGCTGTGAACATTGTACAAACCACATTGATGGCAATTCCAGCTCAG
TTTCAACACGCCGCTCGACAATATGAACAATGCTTCTCCATGAAGACTTT
TGTAGAGAAATATGGAACTGATCGTGATCATCATGTAACCACTCAGCTTG
TCGAAAACGTCTCTCAAGCCAACAGCCCAACCAATCCATCTGACACACCG
GTTTCGGCAGAACAACAAGCCACCGATCAAATGTGA
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Coding sequence (CDS) from alignment at tig00000850_pilon:1153482..1154567+

>Ggra3707.t1 ID=Ggra3707.t1|Name=Ggra3707.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1086bp|location=Sequence derived from alignment at tig00000850_pilon:1153482..1154567+ (Gracilaria gracilis GNS1m male)
ATGATGCTGGCGGCTCGTCTTCGCAGCCGCCATGAATGTCACCCATCCAC
GGAGGTGCAGACCCTCGCCTCGCATCCGCTACCAACTGCACCGCCTCGCG
AGATAGACGCTGCTAGAATTGCCACGCTGGAGGGACTGCCCACTGAGCTC
GTGTTGGAGCGCGCTCGTCTCGTGTCTCAGGCACCTTCTCAAATGCCTTA
CATTGGCATTTTTGGCAAGTACAACAAACGATGGTATGTTGATATCGTCA
CCTTGCCGCATAATGCGCTTCGCTGCCTTGTCTCGAGCGTGTTTGAGTTG
CTTTCCGCTTCGCATCGATTGGCGCTTGATATGACCGAGTCCGACTTTGA
GCAGTTGTTCACCTTTCTGGCTGAGTTTGATCACTTCACCCGCGTTGTGT
TCGACGCTGAGCAGAAGATTCTGTTTCCTGAAGTGGAGCATGCGCTTAAG
AAACGCCCTGATTACACCACACATGCGCTTCATCCCACCCTTCGTGCAAC
AACAATCTCTACAATTCATGCGCTTCTTGACAAGTTGACGGACAAATCTC
TCAACGAGACTCCCAGTCTAACTGTCATTCACATCCTTCGAACCACCATG
GACAAACTGTCCACACAACTGCTGGACTACTTTGCCGTCAAAGAAACAGT
TCTGCCTCGCATTCTGTTCCGTTCGTACCGCGGAGCAAAGGAAAAGAATC
GAATGGAAGCACGGCTGATAAAGTTTTTTGAAGAAGCCAGTCATCAGTAT
TACTACACCGCTTTATTGACGTTGCCGCTTAACAATGAACAGGTACGCCT
CGATTTTGAAGAGCGTCATTTCCCCAAGCCCAATCACCGTCAACAATATC
GTGACGCTGTGAACATTGTACAAACCACATTGATGGCAATTCCAGCTCAG
TTTCAACACGCCGCTCGACAATATGAACAATGCTTCTCCATGAAGACTTT
TGTAGAGAAATATGGAACTGATCGTGATCATCATGTAACCACTCAGCTTG
TCGAAAACGTCTCTCAAGCCAACAGCCCAACCAATCCATCTGACACACCG
GTTTCGGCAGAACAACAAGCCACCGATCAAATGTGA
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