Ggra370.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra370.t1
Unique NameGgra370.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length531
Homology
BLAST of Ggra370.t1 vs. uniprot
Match: A0A2V3IN56 (Female germline-specific tumor suppressor gld-1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IN56_9FLOR)

HSP 1 Score: 634 bits (1635), Expect = 4.500e-221
Identity = 377/589 (64.01%), Postives = 421/589 (71.48%), Query Frame = 0
Query:    1 MARVST-HLEQLVREAEVLSSIKNDVPNAWKILELEIGRARAAVVRAVDADHSLPLHPASSSDACVPTSSATLHDHAPRHSVRKRVKLRVPADQYPEYNFVGRLLGPRGATLKRLERDTGCRIMIRGKGSIRKDKEAEVRGKPGWEHVFNEPLHVVIEVVDSPDELSASRILNHAKQLVEILLIPVPEERDSLKRAQLRDLAILNGTHRSVSDLLGATPHNMPLSTVHRSNPLATSPPPLRRAQSQHTKPSQKMYANDYANMFEPLLPFARHNSYSPPVPSPPRALHNLASY--------------------------------------------------------------SQPNSSTSNTN---------------------FPLPVPSPTIVDPEIYPYPPTPGLLTADQQLSAFASPTWTPSRPPASAMSXXXXXXXXXXXXXD-----------SNTQPSSSFLLGRTLGDFSRHSHSHNTPSLDSTSLDALSFDASFGAARAPQFADLDARDSVHAQKHPFSAMRNSNGDAIVLANLFPPSATVASTTAKPFEQRRELSHVQHADSHHVKQHAHSRQSSPQ 494
            MARV+T  LE+LVREAEVLS IK DVPNAWKILE+EIGRARAA+VRA D + S+ L    S+D   P     L DHAPRHSVRKRVKLRVPADQYPEYNFVGRLLGPRGATLKRLERDTGCRIMIRGKGSIRKDKEA+VRGKPGWEHVFNEPLHVVIEVVDSPDELSA+RIL HAKQLVE+LLIPVPEERDSLKRAQLRDLAILNGTHRSVSDLLGA+ H  PLS++HRSNPLATSP PLRRAQSQH+KPSQKMYANDYANMFEPLLPFARHNSYSPP P   R++HNL++Y                                                              S P+  T   N                     FP+P PSPTIVDPEIYPYPPTPG+L+A+QQLSAFASPTWTPSRPPAS +SXXXXXXXXXXXXX             + QP++SFLLGRTLGDFSRHS   +   L  + +DALSFD SFG+  A  F D+D RD + +QKHPFS MRN NGDAIVLANLFP SA  ++  ++PF+QRRE+  ++H+DS +VKQH HS Q   Q
Sbjct:    1 MARVTTLRLEELVREAEVLSRIKADVPNAWKILEMEIGRARAAIVRANDPEASVSL----STDPTPP-----LQDHAPRHSVRKRVKLRVPADQYPEYNFVGRLLGPRGATLKRLERDTGCRIMIRGKGSIRKDKEADVRGKPGWEHVFNEPLHVVIEVVDSPDELSATRILAHAKQLVEMLLIPVPEERDSLKRAQLRDLAILNGTHRSVSDLLGASQHTNPLSSMHRSNPLATSPAPLRRAQSQHSKPSQKMYANDYANMFEPLLPFARHNSYSPPAPQ--RSMHNLSAYPSAQPPXXXXXXXXXXXXXXXXXXXXXXXXXXXTPTFASTSHDSLLPELEKLRIPSLDFDHISDPSLCTFQNNNPXXXXXXXXXXXXXXXXXXXFPMPAPSPTIVDPEIYPYPPTPGILSAEQQLSAFASPTWTPSRPPASTISXXXXXXXXXXXXXXXXXXXXXXXXTGSHQPTASFLLGRTLGDFSRHSQLQSGHEL--SGVDALSFDQSFGS-HAAHFGDMDGRDGMASQKHPFSTMRNGNGDAIVLANLFPSSAAASTHVSRPFDQRREMP-LEHSDSLNVKQHEHSVQQQHQ 574          
BLAST of Ggra370.t1 vs. uniprot
Match: A0A7S0BGQ7 (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BGQ7_9RHOD)

HSP 1 Score: 216 bits (551), Expect = 6.600e-62
Identity = 115/203 (56.65%), Postives = 148/203 (72.91%), Query Frame = 0
Query:    8 LEQLVREAEVLSSIKNDVPNAWKILELEIGRARAAVVRAVDADHSLPLHPASSSDACVPTSSATLHDHAPRHSV--RKRVKLRVPADQYPEYNFVGRLLGPRGATLKRLERDTGCRIMIRGKGSIRKDKEAEVRGKPGWEHVFNEPLHVVIEVVDSPDELSASRILNHAKQLVEILLIPVPEERDSLKRAQLRDLAILNGTHR 208
            LE+L++E  V+  IK+  P +W +++ EI R +    +       +  + A+++D    + ++T    +   ++  +KRVKL +PAD+YPEYNFVGRLLGPRGATLK LER+TGC+IMIRG+GSIRKDKE EVRGKPGWEHVFNEPLHVVIE     +E  ASR LN AK+ +E+LL+PVPEE DSLKR QLRDLAILNGT R
Sbjct:   23 LEELIKERTVMEQIKSKCPLSWSVIDTEITRLQLETQQFSGIASGMS-NGATANDVNDSSHNSTSSRRSASSNMGSKKRVKLPIPADKYPEYNFVGRLLGPRGATLKALERETGCKIMIRGRGSIRKDKETEVRGKPGWEHVFNEPLHVVIEA--DFEEPHASRALNRAKEAIELLLVPVPEENDSLKRQQLRDLAILNGTFR 222          
BLAST of Ggra370.t1 vs. uniprot
Match: A0A7S1T622 (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1T622_9RHOD)

HSP 1 Score: 218 bits (555), Expect = 2.040e-61
Identity = 128/249 (51.41%), Postives = 159/249 (63.86%), Query Frame = 0
Query:    7 HLEQLVREAEVLSSIKNDVPNAWKILELEIGRARAAVVR---------------------------AVDADHS-------------LPLHPASSSDACVPTSSATLHDHA------PRHSV-RKRVKLRVPADQYPEYNFVGRLLGPRGATLKRLERDTGCRIMIRGKGSIRKDKEAEVRGKPGWEHVFNEPLHVVIEVVDSPDELSASRILNHAKQLVEILLIPVPEERDSLKRAQLRDLAILNGTHR 208
            H+++L+RE   L  ++  +P A  +L+ EI R +AAV R                           ++D +H+             L LH ++S     PTSS   +  +      P  SV +KRVKL +PAD+YP YNFVGRLLGPRGATLK LER+TGC+IMIRG+GSIRKDKE EVRGKPGWEHVFNEPLHVVIE     DE+SA+R LN AK+ VE+LL+PVPE+RDSLKR QLR+LAILNGT R
Sbjct:   19 HMDELLRERAALEPLRGSLPIASSLLDAEILRVQAAVDRVGDVVTNASVMAVQSSVSMAASSTGTLSLDVEHAAGLAEDPALLVQQLTLHASTSVAGSSPTSSPPPYTRSRSAPGIPTASVVKKRVKLPIPADKYPVYNFVGRLLGPRGATLKALERETGCKIMIRGRGSIRKDKEIEVRGKPGWEHVFNEPLHVVIEA--EMDEISATRALNRAKEAVELLLVPVPEDRDSLKRQQLRELAILNGTFR 265          
BLAST of Ggra370.t1 vs. uniprot
Match: A0A2V3IKH8 (Female germline-specific tumor suppressor gld-1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IKH8_9FLOR)

HSP 1 Score: 211 bits (537), Expect = 1.250e-59
Identity = 124/235 (52.77%), Postives = 144/235 (61.28%), Query Frame = 0
Query:    8 LEQLVREAEVLSSIKNDVPNAWKILELEIGRARAAVVRAVDADHSLPLHPASSSDACVPTSSATLHDHAPRHSVRKRVKLRVPADQYPEYNFVGRLLGPRGATLKRLERDTGCRIMIRGKGSIRKDKEAEVRGKPGWEHVFNEPLHVVIEVVDSPDELSASRILNHAKQLVEILLIPVPEERDSLKRAQLRDLAILNGTHRSVSDLLGATPHNMPLSTVHRSNPLATSPPPLRRA 242
            L QL+RE + +   +  +PN   +L+ EI RARAA             HP                        RKRVKL VP+D++P+YNFVGRLLGPRG TL+ LERDTGCRIMIRGKGSIRKDKE +VRGKPGWEHVFNEPLHVVIE  D   E SAS  L  A   VE+LL+PVPEERD+LKR QLR LAI+NGT+R      GA     P+     S PLA  P P+  A
Sbjct:   33 LAQLLRERDRILPFRASLPNLVALLDAEIARARAATPST---------HP------------------------RKRVKLPVPSDKFPDYNFVGRLLGPRGTTLRTLERDTGCRIMIRGKGSIRKDKEPDVRGKPGWEHVFNEPLHVVIEAPDGLQEPSASAALARAADAVELLLVPVPEERDALKRHQLRALAIMNGTYR------GAPHAQYPIPYPIESEPLAPLPSPILSA 228          
BLAST of Ggra370.t1 vs. uniprot
Match: M2XRR5 (RNA-binding protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XRR5_GALSU)

HSP 1 Score: 207 bits (527), Expect = 1.190e-57
Identity = 113/204 (55.39%), Postives = 142/204 (69.61%), Query Frame = 0
Query:    8 LEQLVREAEVLSSIKNDVPNAWKILELEIGRARAAVVRAVDADHSLPLHPASSSDACVPTSSATLHDHAPRHSVRKRVKLRVPADQYPEYNFVGRLLGPRGATLKRLERDTGCRIMIRGKGSIRKDKEAEVRGKPGWEHVFNEPLHVVIEVVDSPDELSASRILNHAKQLVEILLIPVPEERDSLKRAQLRDLAILNGTHRSVS 211
            L  L+RE   L ++K+ VP  + +LE EI      +    D+  S+      + +     ++   ++  P   V+KR+KL +PA +YP+YNFVGRLLGPRGATLK LER+TGC+IMIRGKGSIRKDKE EVRGKPGWEHVFNEPLHVV+E     DE SA   LN AK+ +E+LL+PVPEE+DSLKR QLRDLAILNGT R  +
Sbjct:   10 LGDLIRERNTLETLKSAVPQTYWLLEREISEIETLLR---DSSSSIQDVYFGNVNQTQNQTNKYTYNSVP---VKKRIKLPIPAHKYPDYNFVGRLLGPRGATLKALERETGCKIMIRGKGSIRKDKENEVRGKPGWEHVFNEPLHVVVEA--EMDEASALVALNRAKESIELLLVPVPEEKDSLKRQQLRDLAILNGTFRGTN 205          
BLAST of Ggra370.t1 vs. uniprot
Match: A0A7S0ZJQ1 (Hypothetical protein (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZJQ1_9RHOD)

HSP 1 Score: 204 bits (519), Expect = 1.080e-56
Identity = 99/130 (76.15%), Postives = 112/130 (86.15%), Query Frame = 0
Query:   82 RKRVKLRVPADQYPEYNFVGRLLGPRGATLKRLERDTGCRIMIRGKGSIRKDKEAEVRGKPGWEHVFNEPLHVVIEVVDSPDELSASRILNHAKQLVEILLIPVPEERDSLKRAQLRDLAILNGTHRSVS 211
            +KRVKL VPA++YPEYNFVGRLLGPRGATLK+LER+TGC+IMIRG+GSIRKDKE EVRGKPGWEHVFNEPLHVVIE     D+    R LN A++ VE+LL+PVPE+RDSLKR QLRDLAILNGT R  S
Sbjct:  209 KKRVKLAVPAERYPEYNFVGRLLGPRGATLKQLERETGCKIMIRGRGSIRKDKEGEVRGKPGWEHVFNEPLHVVIEADSMEDDAVCHRALNRAREAVELLLVPVPEDRDSLKRQQLRDLAILNGTFRGSS 338          
BLAST of Ggra370.t1 vs. uniprot
Match: A0A5J4Z4E7 (Protein quaking-A n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z4E7_PORPP)

HSP 1 Score: 206 bits (523), Expect = 3.730e-56
Identity = 102/128 (79.69%), Postives = 114/128 (89.06%), Query Frame = 0
Query:   81 VRKRVKLRVPADQYPEYNFVGRLLGPRGATLKRLERDTGCRIMIRGKGSIRKDKEAEVRGKPGWEHVFNEPLHVVIEVVDSPDELSASRILNHAKQLVEILLIPVPEERDSLKRAQLRDLAILNGTHR 208
            V+KRVKL VPAD+YP+YNFVGRLLGPRGATLK LERDTGC+IMIRGKGSIRKDKE EVRGKPGWEHVFNEPLHVV+E  +  +E  A+R LN AK+ VE+LL+PVPE+RDSLKR QLRDLAILNGT R
Sbjct:  192 VKKRVKLPVPADKYPDYNFVGRLLGPRGATLKALERDTGCKIMIRGKGSIRKDKEMEVRGKPGWEHVFNEPLHVVVEAEN--EEAVATRALNRAKEAVELLLVPVPEDRDSLKRQQLRDLAILNGTFR 317          
BLAST of Ggra370.t1 vs. uniprot
Match: A0A7S1XEW8 (Hypothetical protein (Fragment) n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XEW8_9RHOD)

HSP 1 Score: 184 bits (468), Expect = 1.330e-51
Identity = 87/133 (65.41%), Postives = 111/133 (83.46%), Query Frame = 0
Query:   76 APRHSVRKRVKLRVPADQYPEYNFVGRLLGPRGATLKRLERDTGCRIMIRGKGSIRKDKEAEVRGKPGWEHVFNEPLHVVIEVVDSPDELSASRILNHAKQLVEILLIPVPEERDSLKRAQLRDLAILNGTHR 208
            A     RKRV++ VP ++YP+YNFVGRLLGPRGATLK+LE+DTGCRI+IRGKGS+RK++EAEV GKPGWEHVF +PLHV+IE   S  +  A + LN AK+ +E+LL+PVP+++DSLKR QLR+LAI+NGT R
Sbjct:    6 AQEEMARKRVRVPVPTEKYPDYNFVGRLLGPRGATLKKLEQDTGCRILIRGKGSVRKEREAEVVGKPGWEHVFTDPLHVIIE--SSSTDAHAQKALNRAKEAIELLLVPVPDDQDSLKRHQLRELAIINGTFR 136          
BLAST of Ggra370.t1 vs. uniprot
Match: M1VE76 (Similar to RNA-binding protein QKI n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1VE76_CYAM1)

HSP 1 Score: 195 bits (495), Expect = 3.040e-51
Identity = 98/145 (67.59%), Postives = 118/145 (81.38%), Query Frame = 0
Query:   78 RHSVRKRVKLRVPADQYPEYNFVGRLLGPRGATLKRLERDTGCRIMIRGKGSIRKDKEAEVRGKPGWEHVFNEPLHVVIEVVDSPDELSASRILNHAKQLVEILLIPVPEERDSLKRAQLRDLAILNGTHRSVSDLLGATPHNMP 222
            R+ V+KR ++ VPADQYP+YNFVGRLLGPRGATLK+LE++TGC+IMIRGKGSIRKDKE EVRGKPGWEHVF+EPLHV++E     +E  A   L  AK+LVE+LLIPVPE+RD+LKR QLR+LA+LNGT R       AT H +P
Sbjct:  431 RNIVKKRCRVSVPADQYPDYNFVGRLLGPRGATLKKLEKETGCKIMIRGKGSIRKDKENEVRGKPGWEHVFSEPLHVILEA--EMEESQADYALERAKELVELLLIPVPEDRDTLKREQLRELAMLNGTLRQ-----SATEHEIP 568          
BLAST of Ggra370.t1 vs. uniprot
Match: A0A7J7IBG4 (KH domain-containing protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IBG4_9RHOD)

HSP 1 Score: 196 bits (497), Expect = 3.960e-51
Identity = 95/131 (72.52%), Postives = 114/131 (87.02%), Query Frame = 0
Query:   78 RHSVRKRVKLRVPADQYPEYNFVGRLLGPRGATLKRLERDTGCRIMIRGKGSIRKDKEAEVRGKPGWEHVFNEPLHVVIEVVDSPDELSASRILNHAKQLVEILLIPVPEERDSLKRAQLRDLAILNGTHR 208
            R+ ++KR ++ VPADQYP+YNFVGRLLGPRGATLK+LER+TGC+IMIRGKGSIRKDKE+EVRGKPGWEHVF+EPLHV++E     +E  A   L  AK+LVE+LLIPVPE+RD+LKR QLR+LAILNGT R
Sbjct:  497 RNIIKKRCRVSVPADQYPDYNFVGRLLGPRGATLKKLERETGCKIMIRGKGSIRKDKESEVRGKPGWEHVFSEPLHVILEA--EMEESQADYALERAKELVELLLIPVPEDRDTLKREQLRELAILNGTLR 625          
The following BLAST results are available for this feature:
BLAST of Ggra370.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IN564.500e-22164.01Female germline-specific tumor suppressor gld-1 n=... [more]
A0A7S0BGQ76.600e-6256.65Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A7S1T6222.040e-6151.41Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A2V3IKH81.250e-5952.77Female germline-specific tumor suppressor gld-1 n=... [more]
M2XRR51.190e-5755.39RNA-binding protein n=1 Tax=Galdieria sulphuraria ... [more]
A0A7S0ZJQ11.080e-5676.15Hypothetical protein (Fragment) n=1 Tax=Timspurcki... [more]
A0A5J4Z4E73.730e-5679.69Protein quaking-A n=1 Tax=Porphyridium purpureum T... [more]
A0A7S1XEW81.330e-5165.41Hypothetical protein (Fragment) n=1 Tax=Compsopogo... [more]
M1VE763.040e-5167.59Similar to RNA-binding protein QKI n=1 Tax=Cyanidi... [more]
A0A7J7IBG43.960e-5172.52KH domain-containing protein n=1 Tax=Cyanidiococcu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004087K Homology domainSMARTSM00322kh_6coord: 81..179
e-value: 7.2E-9
score: 45.5
IPR036612K Homology domain, type 1 superfamilyGENE3D3.30.1370.10K Homology domain, type 1coord: 3..213
e-value: 5.9E-55
score: 188.2
IPR036612K Homology domain, type 1 superfamilySUPERFAMILY54791Eukaryotic type KH-domain (KH-domain type I)coord: 87..207
IPR004088K Homology domain, type 1PFAMPF00013KH_1coord: 87..142
e-value: 6.4E-8
score: 32.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 228..252
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 323..380
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 327..379
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 476..513
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 286..307
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 273..308
NoneNo IPR availablePROSITEPS50084KH_TYPE_1coord: 98..155
score: 9.498
NoneNo IPR availableCDDcd02395SF1_like-KHcoord: 86..208
e-value: 9.74777E-52
score: 170.502
IPR045071KH domain-containing BBP-likePANTHERPTHR11208RNA-BINDING PROTEIN RELATEDcoord: 80..369

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000950_piloncontigtig00000950_pilon:183278..185431 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra370.t1Ggra370.t1Gracilaria gracilis GNS1m malemRNAtig00000950_pilon 183278..185431 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra370.t1 ID=Ggra370.t1|Name=Ggra370.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=531bp
MARVSTHLEQLVREAEVLSSIKNDVPNAWKILELEIGRARAAVVRAVDAD
HSLPLHPASSSDACVPTSSATLHDHAPRHSVRKRVKLRVPADQYPEYNFV
GRLLGPRGATLKRLERDTGCRIMIRGKGSIRKDKEAEVRGKPGWEHVFNE
PLHVVIEVVDSPDELSASRILNHAKQLVEILLIPVPEERDSLKRAQLRDL
AILNGTHRSVSDLLGATPHNMPLSTVHRSNPLATSPPPLRRAQSQHTKPS
QKMYANDYANMFEPLLPFARHNSYSPPVPSPPRALHNLASYSQPNSSTSN
TNFPLPVPSPTIVDPEIYPYPPTPGLLTADQQLSAFASPTWTPSRPPASA
MSSSSLPPRSPPAAADSNTQPSSSFLLGRTLGDFSRHSHSHNTPSLDSTS
LDALSFDASFGAARAPQFADLDARDSVHAQKHPFSAMRNSNGDAIVLANL
FPPSATVASTTAKPFEQRRELSHVQHADSHHVKQHAHSRQSSPQQLEAAH
GLSAHSIGVPDTSGRLLADEKDCFFSSSIS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004087KH_dom
IPR036612KH_dom_type_1_sf
IPR004088KH_dom_type_1
IPR045071BBP-like