Ggra3629.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra3629.t1
Unique NameGgra3629.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length426
Homology
BLAST of Ggra3629.t1 vs. uniprot
Match: A0A2V3IJW8 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJW8_9FLOR)

HSP 1 Score: 387 bits (993), Expect = 3.820e-129
Identity = 209/379 (55.15%), Postives = 281/379 (74.14%), Query Frame = 0
Query:   47 TETIAIKNKLDTAQGKVSDLISRLDSVSDDATRAKNEIHSTLVEVWNIADMLGQDRCADLQAQARADKQALQLQISRLEQQLAAQLKQLDASKSRAAELQRGETRLVAQLAEQRAARDAADAQARSLADKLHWANAVANETHAYQLVAERLSSLLSVVTERSATLQRLEALVVDATAGSADWRAEVQQLSSVIRDAERDFAGGYQNAAVSGLTRRADELQRRLADALQRGDHLASQKGALQKSLDALQTKLKRALPGGAXXXXXXVLSALTRADVDASFGGAPPPPSSVPADGAQTWVGTLTLCILSVCTGAVLVFLLSNWQANKELVDDTPRADKFGFTPSSSATTPGFQRTSVSPLQYVNSANSKTPASRGSTPRRY 425
            +ETI IKNKL TA+GKVSDLISRLDSVSDDATRAKNEIHSTL+EVW I DMLGQDRC D+  + RA +Q  Q +I  L++++   LK+ ++ K +  + +     L  ++  +R+ R+A + + R L DKLHWANAV+NET  Y+LVAERL +LL VV+ER+  L+R+E +V DA +G ++W+ E++ L++++RDAERDFAGGY++AA+SGL R++++L+RRL DA +  D LA ++ +L+KSL+ LQTKL   +             + ++ +++  +     PP S   +  Q+WVGTLTLCILSVCTGAVLVFLLSNWQ NKE+  ++P  +K+GFTPSSSATTPGFQRTS SPLQ+VNS NSKTP SRGSTPRRY
Sbjct:   35 SETIQIKNKLATAEGKVSDLISRLDSVSDDATRAKNEIHSTLIEVWKIVDMLGQDRCGDVVDKVRAAQQKAQSKIVELQEEIRGHLKETESLKLKLVQQEEATANLNTEIKAERSRREALEIETRELRDKLHWANAVSNETQKYELVAERLQNLLVVVSERTQLLRRIETMVGDAHSGFSNWKEEIESLTNIVRDAERDFAGGYKSAAISGLKRQSEDLERRLRDAQKGKDSLADERNSLRKSLELLQTKLNSGM-------------STSKKNIEYVY----KPPQST--EEGQSWVGTLTLCILSVCTGAVLVFLLSNWQQNKEM--ESPAQEKYGFTPSSSATTPGFQRTSASPLQFVNSGNSKTPTSRGSTPRRY 392          
BLAST of Ggra3629.t1 vs. uniprot
Match: R7QB57 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QB57_CHOCR)

HSP 1 Score: 294 bits (752), Expect = 4.120e-92
Identity = 173/380 (45.53%), Postives = 250/380 (65.79%), Query Frame = 0
Query:   48 ETIAIKNKLDTAQGKVSDLISRLDSVSDDATRAKNEIHSTLVEVWNIADMLGQDRCADLQAQARADKQALQLQISRLEQQLAAQLKQLDASKSRAAELQRGETRLVAQLAEQRAARDAADAQARSLADKLHWANAVANETHAYQLVAERLSSLLSVVTERSATLQRLEALVVDATAGSADWRAEVQQLSSVIRDAERDFAGGYQNAAVSGLTRRADELQRRLADALQRGDHLASQKGALQKSLDALQTKLKRALPGGAXXXXXXVLSALTRADVDASFGGAPPPPSSVPADGAQTWVGTLTLCILSVCTGAVLVFLLSNWQANKELVDDTPRADKFGFTPSS-SATTPGFQRTSVSPLQYVNSAN-SKTPASRGSTPRRY 425
            ET+ IKNKL TA+G+V+DLISRLDSVSDDA+RAKNEIH+TL+EVW + D+LG+DRC ++  + R  ++  + + +  E+++   LK ++  K + A+       L  ++  +R+ R+  + +AR L DKLHWA+AV+NET  Y+LVAERL  LL VVTER+  L R+  +V DA  G ++WR E+  LS+V+RDAERDF+GGYQ+AAV GL R   +L+ RL+ AL+  D L+ ++  L++S++ALQ K+  A  GG       ++    +++ +            V  D   + +G +TLC++SVCTGAV VFLLS+ + +      T  A+K+GFTP+S S T+PGF     SPLQY N  + S+TP SRGSTPRRY
Sbjct:   86 ETLTIKNKLATAEGRVTDLISRLDSVSDDASRAKNEIHTTLMEVWQVVDLLGKDRCGEVVDKVRVAQKKAENKATEQEEEIREHLKSIENLKLQLAKDGDSVNSLQTEIKAERSRREVLETEARDLRDKLHWASAVSNETEKYELVAERLQRLLVVVTERTNLLNRILTMVGDAHNGFSEWRKEISSLSTVVRDAERDFSGGYQSAAVEGLRRHTIDLENRLSQALKGRDTLSDERTVLRRSIEALQKKISSA--GG-------IMGGTGKSERERIV---------VQTDSGTSMLGVVTLCLISVCTGAVAVFLLSSQRGSSNA---TQTAEKYGFTPTSASRTSPGFPSGGPSPLQYANPGSASRTPGSRGSTPRRY 444          
BLAST of Ggra3629.t1 vs. uniprot
Match: A0A5J4YKW1 (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YKW1_PORPP)

HSP 1 Score: 72.8 bits (177), Expect = 3.040e-10
Identity = 85/367 (23.16%), Postives = 156/367 (42.51%), Query Frame = 0
Query:   12 LLAAAVFITATAAADQPHNVVTTXXXXXXXXXXXXTETIAIKNKLDTAQGKVSDLISRLDSVSDDATRAKNEIHSTLVEVWNIADMLGQDRCADLQAQARADKQALQ---LQISRLEQQLAAQLKQLDASKSRAAELQRGETRLVAQLAEQRAA----RDAADAQARSLADKLHWANAVANETHAYQLVAERLSSLLSVVTERSATLQRLEALVVDATAGSADWRAEVQQLSSVIRDAERDFAGGYQNAAVSGLTRRADELQRRLADALQRGDHLASQKGALQKSLDALQTKLKRALP--GGAXXXXXXVLSALTRADVDASFGGAPPPPSSVPADGAQ------TWVGTLTLCILSVCTGAVLVFL 363
            +L  +V ++A   A+  +   TT             E + ++ KL+ A+G+V +L+S L+ VS DA+RAK EIH  L E W++ DML +D+C D     R  ++ ++   ++   + +     + +L+  K  AA++++       +L E+  A    RD    + +   +K+  A+A+ N +  YQ +  +   + ++V  R   L +L  ++   +    +       L + ++D + +F        +S L                        + A+QK   AL+ +L  AL     A      V  +   A    S   AP  PSS  + GA       +W    T+    +C GAV++ L
Sbjct:   22 MLVVSVAVSAARQAEYEYTATTTRSSTGSKVVSNEKEAMQLRTKLEHAEGRVRELVSNLEVVSVDASRAKTEIHEMLHEAWSMVDMLSRDKCGDAVETVRIKQREIESALIESREMVEDRERVIAKLEKEKGAAAKVRK-------ELEEKEDAWADERDKLMREIQLEREKVVVAHALFNASSIYQKLHPQFDEVATLVHSRFELLTKLRTMIGQLSGEHDELVGAFSSLETFVKDVDAEFKSKISGLKLSSLD-----------------------QSAVQKHAAALEARLHEALVERDAAMREVRQVYDSFNAAQGAESHIIAPAFPSSSGSGGASGSGVSSSWSTGWTIFFTFIC-GAVMMAL 357          
The following BLAST results are available for this feature:
BLAST of Ggra3629.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3IJW83.820e-12955.15Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QB574.120e-9245.53Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A5J4YKW13.040e-1023.16Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 225..245
NoneNo IPR availableCOILSCoilCoilcoord: 107..141
NoneNo IPR availableCOILSCoilCoilcoord: 255..282
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 394..425
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 365..425
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 343..364
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..342
NoneNo IPR availableTMHMMTMhelixcoord: 342..364

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000850_piloncontigtig00000850_pilon:346578..347855 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra3629.t1Ggra3629.t1Gracilaria gracilis GNS1m malemRNAtig00000850_pilon 346578..347855 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra3629.t1 ID=Ggra3629.t1|Name=Ggra3629.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=426bp
MSPCALLPFSVLLAAAVFITATAAADQPHNVVTTTTTTSSKSKSKSTETI
AIKNKLDTAQGKVSDLISRLDSVSDDATRAKNEIHSTLVEVWNIADMLGQ
DRCADLQAQARADKQALQLQISRLEQQLAAQLKQLDASKSRAAELQRGET
RLVAQLAEQRAARDAADAQARSLADKLHWANAVANETHAYQLVAERLSSL
LSVVTERSATLQRLEALVVDATAGSADWRAEVQQLSSVIRDAERDFAGGY
QNAAVSGLTRRADELQRRLADALQRGDHLASQKGALQKSLDALQTKLKRA
LPGGAAGGGGGVLSALTRADVDASFGGAPPPPSSVPADGAQTWVGTLTLC
ILSVCTGAVLVFLLSNWQANKELVDDTPRADKFGFTPSSSATTPGFQRTS
VSPLQYVNSANSKTPASRGSTPRRY*
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