Ggra3629.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra3629.t1
Unique NameGgra3629.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length426
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000850_piloncontigtig00000850_pilon:346578..347855 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra3629Ggra3629Gracilaria gracilis GNS1m malegenetig00000850_pilon 346578..347855 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3629.t1.start1Ggra3629.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000850_pilon 346578..346580 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3629.t1.CDS1Ggra3629.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000850_pilon 346578..347855 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3629.t1.exon1Ggra3629.t1.exon1Gracilaria gracilis GNS1m maleexontig00000850_pilon 346578..347855 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3629.t1.stop1Ggra3629.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000850_pilon 347853..347855 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra3629.t1Ggra3629.t1Gracilaria gracilis GNS1m malepolypeptidetig00000850_pilon 346578..347855 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra3629.t1 ID=Ggra3629.t1|Name=Ggra3629.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=426bp
MSPCALLPFSVLLAAAVFITATAAADQPHNVVTTTTTTSSKSKSKSTETI
AIKNKLDTAQGKVSDLISRLDSVSDDATRAKNEIHSTLVEVWNIADMLGQ
DRCADLQAQARADKQALQLQISRLEQQLAAQLKQLDASKSRAAELQRGET
RLVAQLAEQRAARDAADAQARSLADKLHWANAVANETHAYQLVAERLSSL
LSVVTERSATLQRLEALVVDATAGSADWRAEVQQLSSVIRDAERDFAGGY
QNAAVSGLTRRADELQRRLADALQRGDHLASQKGALQKSLDALQTKLKRA
LPGGAAGGGGGVLSALTRADVDASFGGAPPPPSSVPADGAQTWVGTLTLC
ILSVCTGAVLVFLLSNWQANKELVDDTPRADKFGFTPSSSATTPGFQRTS
VSPLQYVNSANSKTPASRGSTPRRY*
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spliced messenger RNA

>Ggra3629.t1 ID=Ggra3629.t1|Name=Ggra3629.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1278bp|location=Sequence derived from alignment at tig00000850_pilon:346578..347855+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGTCTCCGTGCGCGCTTCTCCCGTTCTCCGTGCTGCTGgccgccgccgt
cttcatcaccgccaccgccgccgccgaccagccccacaacgtcgtcacta
ccaccaccaccaccTCCTCCAAGTCCAAGTCCAAGTCCACCGAGACCATC
GCCATCAAGAATAAGCTCGACACCGCGCAGGGCAAGGTGAGCGACCTCAT
CTCGCGCCTGGACTCCGTGTCCGACGACGCCACGCGCGCCAAGAACGAGA
TCCACTCCACGCTGGTGGAGGTGTGGAACATTGCCGACATGCTCGGTCAG
GACCGCTGCGCCGACCTCCAAGCGCAGGCGCGCGCCGACAAGCAAGCGCT
GCAGCTGCAAATCTCGCGCCTGGAGCAGCAGCTGGCGGCGCAGCTCAAGC
AGCTGGACGCGTCCAAAAGCCGCGCGGCCGAGCTGCAGCGCGGCGAGACG
CGCCTGGTGGCGCAGCTCGCCGAGCAACGCGCGGCGCGCGACGCCGCCGA
CGCGCAGGCGCGCTCGCTGGCAGACAAGCTGCACTGGGCAAACGCCGTCG
CCAACGAGACGCACGCGTACCAGCTGGTGGCGGAGCGGCTGTCGTCGCTG
CTGTCCGTGGTCACGGAGCGCAGCGCCACGCTGCAGCGCCTGGAGGCGCT
GGTGGTGGACGCCACCGCCGGCTCGGCCGACTGGCGCGCCGAAGTGCAGC
AGCTCTCGTCCGTCATCCGCGACGCGGAGCGCGACTTTGCGGGCGGCTAC
CAGAACGCCGCCGTGTCCGGCCTCACCAGGCGCGCCGACGAGCTGCAGCG
CCGCCTGGCTGACGCGCTGCAGCGCGGCGATCACCTCGCGTCGCAGAAGG
GCGCGCTGCAAAAGTCGCTCGACGCGCTGCAGACAAAGCTCAAGCGCGCG
CTGCCGggcggcgccgcgggcggcggcggcggcgtgctgtcggcgctgac
gcgcgccgacgtggacgcgtcgttcggcggcgcgccgccgccgccgtcgt
ccgtgcccgcggacggcgCGCAGACGTGGGTCGGCACGCTCACGCTGTGC
ATCCTGTCCGTGTGCACGGGCGCCGTGCTGGTGTTCTTGTTGTCCAACTG
GCAGGCCAACAAGGAGCTGGTGGACGACACGCCGCGCGCGGATAAGTTTG
GTTTCACCCCGTCGTCGTCCGCCACCACGCCGGGCTTTCAGCGCACCAGC
GTTTCGCCGCTGCAGTATGTGAATAGCGCAAACTCCAAGACGCCCGCGTC
CAGAGGCAGCACGCCCAGGCGGTATTGA
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protein sequence of Ggra3629.t1

>Ggra3629.t1 ID=Ggra3629.t1|Name=Ggra3629.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=426bp
MSPCALLPFSVLLAAAVFITATAAADQPHNVVTTTTTTSSKSKSKSTETI
AIKNKLDTAQGKVSDLISRLDSVSDDATRAKNEIHSTLVEVWNIADMLGQ
DRCADLQAQARADKQALQLQISRLEQQLAAQLKQLDASKSRAAELQRGET
RLVAQLAEQRAARDAADAQARSLADKLHWANAVANETHAYQLVAERLSSL
LSVVTERSATLQRLEALVVDATAGSADWRAEVQQLSSVIRDAERDFAGGY
QNAAVSGLTRRADELQRRLADALQRGDHLASQKGALQKSLDALQTKLKRA
LPGGAAGGGGGVLSALTRADVDASFGGAPPPPSSVPADGAQTWVGTLTLC
ILSVCTGAVLVFLLSNWQANKELVDDTPRADKFGFTPSSSATTPGFQRTS
VSPLQYVNSANSKTPASRGSTPRRY*
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mRNA from alignment at tig00000850_pilon:346578..347855+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra3629.t1 ID=Ggra3629.t1|Name=Ggra3629.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1278bp|location=Sequence derived from alignment at tig00000850_pilon:346578..347855+ (Gracilaria gracilis GNS1m male)
ATGTCTCCGTGCGCGCTTCTCCCGTTCTCCGTGCTGCTGgccgccgccgt
cttcatcaccgccaccgccgccgccgaccagccccacaacgtcgtcacta
ccaccaccaccaccTCCTCCAAGTCCAAGTCCAAGTCCACCGAGACCATC
GCCATCAAGAATAAGCTCGACACCGCGCAGGGCAAGGTGAGCGACCTCAT
CTCGCGCCTGGACTCCGTGTCCGACGACGCCACGCGCGCCAAGAACGAGA
TCCACTCCACGCTGGTGGAGGTGTGGAACATTGCCGACATGCTCGGTCAG
GACCGCTGCGCCGACCTCCAAGCGCAGGCGCGCGCCGACAAGCAAGCGCT
GCAGCTGCAAATCTCGCGCCTGGAGCAGCAGCTGGCGGCGCAGCTCAAGC
AGCTGGACGCGTCCAAAAGCCGCGCGGCCGAGCTGCAGCGCGGCGAGACG
CGCCTGGTGGCGCAGCTCGCCGAGCAACGCGCGGCGCGCGACGCCGCCGA
CGCGCAGGCGCGCTCGCTGGCAGACAAGCTGCACTGGGCAAACGCCGTCG
CCAACGAGACGCACGCGTACCAGCTGGTGGCGGAGCGGCTGTCGTCGCTG
CTGTCCGTGGTCACGGAGCGCAGCGCCACGCTGCAGCGCCTGGAGGCGCT
GGTGGTGGACGCCACCGCCGGCTCGGCCGACTGGCGCGCCGAAGTGCAGC
AGCTCTCGTCCGTCATCCGCGACGCGGAGCGCGACTTTGCGGGCGGCTAC
CAGAACGCCGCCGTGTCCGGCCTCACCAGGCGCGCCGACGAGCTGCAGCG
CCGCCTGGCTGACGCGCTGCAGCGCGGCGATCACCTCGCGTCGCAGAAGG
GCGCGCTGCAAAAGTCGCTCGACGCGCTGCAGACAAAGCTCAAGCGCGCG
CTGCCGggcggcgccgcgggcggcggcggcggcgtgctgtcggcgctgac
gcgcgccgacgtggacgcgtcgttcggcggcgcgccgccgccgccgtcgt
ccgtgcccgcggacggcgCGCAGACGTGGGTCGGCACGCTCACGCTGTGC
ATCCTGTCCGTGTGCACGGGCGCCGTGCTGGTGTTCTTGTTGTCCAACTG
GCAGGCCAACAAGGAGCTGGTGGACGACACGCCGCGCGCGGATAAGTTTG
GTTTCACCCCGTCGTCGTCCGCCACCACGCCGGGCTTTCAGCGCACCAGC
GTTTCGCCGCTGCAGTATGTGAATAGCGCAAACTCCAAGACGCCCGCGTC
CAGAGGCAGCACGCCCAGGCGGTATTGA
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Coding sequence (CDS) from alignment at tig00000850_pilon:346578..347855+

>Ggra3629.t1 ID=Ggra3629.t1|Name=Ggra3629.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1278bp|location=Sequence derived from alignment at tig00000850_pilon:346578..347855+ (Gracilaria gracilis GNS1m male)
ATGTCTCCGTGCGCGCTTCTCCCGTTCTCCGTGCTGCTGgccgccgccgt
cttcatcaccgccaccgccgccgccgaccagccccacaacgtcgtcacta
ccaccaccaccaccTCCTCCAAGTCCAAGTCCAAGTCCACCGAGACCATC
GCCATCAAGAATAAGCTCGACACCGCGCAGGGCAAGGTGAGCGACCTCAT
CTCGCGCCTGGACTCCGTGTCCGACGACGCCACGCGCGCCAAGAACGAGA
TCCACTCCACGCTGGTGGAGGTGTGGAACATTGCCGACATGCTCGGTCAG
GACCGCTGCGCCGACCTCCAAGCGCAGGCGCGCGCCGACAAGCAAGCGCT
GCAGCTGCAAATCTCGCGCCTGGAGCAGCAGCTGGCGGCGCAGCTCAAGC
AGCTGGACGCGTCCAAAAGCCGCGCGGCCGAGCTGCAGCGCGGCGAGACG
CGCCTGGTGGCGCAGCTCGCCGAGCAACGCGCGGCGCGCGACGCCGCCGA
CGCGCAGGCGCGCTCGCTGGCAGACAAGCTGCACTGGGCAAACGCCGTCG
CCAACGAGACGCACGCGTACCAGCTGGTGGCGGAGCGGCTGTCGTCGCTG
CTGTCCGTGGTCACGGAGCGCAGCGCCACGCTGCAGCGCCTGGAGGCGCT
GGTGGTGGACGCCACCGCCGGCTCGGCCGACTGGCGCGCCGAAGTGCAGC
AGCTCTCGTCCGTCATCCGCGACGCGGAGCGCGACTTTGCGGGCGGCTAC
CAGAACGCCGCCGTGTCCGGCCTCACCAGGCGCGCCGACGAGCTGCAGCG
CCGCCTGGCTGACGCGCTGCAGCGCGGCGATCACCTCGCGTCGCAGAAGG
GCGCGCTGCAAAAGTCGCTCGACGCGCTGCAGACAAAGCTCAAGCGCGCG
CTGCCGggcggcgccgcgggcggcggcggcggcgtgctgtcggcgctgac
gcgcgccgacgtggacgcgtcgttcggcggcgcgccgccgccgccgtcgt
ccgtgcccgcggacggcgCGCAGACGTGGGTCGGCACGCTCACGCTGTGC
ATCCTGTCCGTGTGCACGGGCGCCGTGCTGGTGTTCTTGTTGTCCAACTG
GCAGGCCAACAAGGAGCTGGTGGACGACACGCCGCGCGCGGATAAGTTTG
GTTTCACCCCGTCGTCGTCCGCCACCACGCCGGGCTTTCAGCGCACCAGC
GTTTCGCCGCTGCAGTATGTGAATAGCGCAAACTCCAAGACGCCCGCGTC
CAGAGGCAGCACGCCCAGGCGGTATTGA
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