Ggra3610.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra3610.t1
Unique NameGgra3610.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length496
Homology
BLAST of Ggra3610.t1 vs. uniprot
Match: A0A2V3IJZ6 (Signal recognition particle 54 kDa protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJZ6_9FLOR)

HSP 1 Score: 818 bits (2112), Expect = 2.060e-296
Identity = 418/460 (90.87%), Postives = 434/460 (94.35%), Query Frame = 0
Query:    1 MVLEGLGSRITGALRKMTNSTVIDEEALKEMLKEITHALLEADVNIKNVAQLRKNVTNRVKLEELAAGVNKRKLIQKAVFDELCSMLDPETKPVVLKRGKPNVVMFVGLQGNGKTTSCVKYAYYHQRKGWKPGLVCADTFRAGAFDQLKQNATKAKVPFIGSYTETDPVKIATDGVERFKNEKCDLIIVDTSGRHKQEQALFAEMEQMADTLKPTDIIFVMDSSIGQAAYDQALAFKNKVSVGSVIITKLDGHAKGGGALSAVSATRSPITFIGTGEHMDEFEPFDTQAFVGRLLGMGDVSGLVNTIKEAGLHENVEMYKRITEGVFTLRDMYDQLESISKLGPLNKVMGMIPGMSEMMKNTNGVDGSVRIKRFQHIMDSMTMDEMENPKVNFTASRKERIARGSGRHPVEVEELLVEYKRFSKVVGKVGKMSKKNMNIDQLSRNTSXXXXXXXDPRMMA 460
            MVLEGLGSRI+GALRKMT+STVIDE ALKEMLKEI HALLEADVNIK+V QLRKNVT RVKLEELAAGVNKRK+IQKAVFDELCSMLDP T PV LKRGKPNVVMFVGLQGNGKTTSCVKYAYYHQRKGWK  LVCADTFRAGAFDQLKQNATKAKVPF GSYTETDPVKIATDGV RFKNE  DLIIVDTSGRHKQE+ALFAEMEQMA+++ PTDIIFVMDS+IGQAAYDQALAF+ KV VGSVIITKLDGHAKGGGALSAVSAT+SPITFIGTGEH+DEFEPF TQAFVGRLLG+GDVSGLVNTIKEAGLHENVEMYKRITEGVFTLRDMYDQLESISKLGPLNKVMGMIPGM+EMMKNTNGVDGSVRIKRFQHIMDSMTM EME+PKVNFTASRKERIARGSGRHP EVEELL+EYKRFSKVVGKVGKMSKKNMNIDQLSRNTS       DPRMMA
Sbjct:    1 MVLEGLGSRISGALRKMTDSTVIDETALKEMLKEINHALLEADVNIKSVVQLRKNVTERVKLEELAAGVNKRKVIQKAVFDELCSMLDPGTAPVTLKRGKPNVVMFVGLQGNGKTTSCVKYAYYHQRKGWKACLVCADTFRAGAFDQLKQNATKAKVPFFGSYTETDPVKIATDGVNRFKNEGYDLIIVDTSGRHKQEEALFAEMEQMAESVNPTDIIFVMDSAIGQAAYDQALAFRAKVKVGSVIITKLDGHAKGGGALSAVSATKSPITFIGTGEHIDEFEPFKTQAFVGRLLGLGDVSGLVNTIKEAGLHENVEMYKRITEGVFTLRDMYDQLESISKLGPLNKVMGMIPGMAEMMKNTNGVDGSVRIKRFQHIMDSMTMKEMEDPKVNFTASRKERIARGSGRHPQEVEELLIEYKRFSKVVGKVGKMSKKNMNIDQLSRNTSQTFQQFMDPRMMA 460          
BLAST of Ggra3610.t1 vs. uniprot
Match: R7QA53 (Signal recognition particle 54 kDa protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QA53_CHOCR)

HSP 1 Score: 791 bits (2044), Expect = 4.150e-286
Identity = 402/460 (87.39%), Postives = 424/460 (92.17%), Query Frame = 0
Query:    1 MVLEGLGSRITGALRKMTNSTVIDEEALKEMLKEITHALLEADVNIKNVAQLRKNVTNRVKLEELAAGVNKRKLIQKAVFDELCSMLDPETKPVVLKRGKPNVVMFVGLQGNGKTTSCVKYAYYHQRKGWKPGLVCADTFRAGAFDQLKQNATKAKVPFIGSYTETDPVKIATDGVERFKNEKCDLIIVDTSGRHKQEQALFAEMEQMADTLKPTDIIFVMDSSIGQAAYDQALAFKNKVSVGSVIITKLDGHAKGGGALSAVSATRSPITFIGTGEHMDEFEPFDTQAFVGRLLGMGDVSGLVNTIKEAGLHENVEMYKRITEGVFTLRDMYDQLESISKLGPLNKVMGMIPGMSEMMKNTNGVDGSVRIKRFQHIMDSMTMDEMENPKVNFTASRKERIARGSGRHPVEVEELLVEYKRFSKVVGKVGKMSKKNMNIDQLSRNTSXXXXXXXDPRMMA 460
            MVLE LG RITGALRKMTNSTVIDEEALKEMLKEI HALLEADVNIK+V +LRKNVTNRV LEELAAGVNKRKLIQKAVFDELCSMLDP TKPV +KRGKPNVVMFVGLQGNGKTTSCVKYAYYHQRKGWK  LVCADTFRAGAFDQLKQ+ATKAKVPF GSYTETDPVKIA DGV+RF+NE  DLIIVDTSGRHKQE +LFAEMEQMA  + P DIIFVMDS+IGQAA+DQA AFK+KV VGSVIITKLDGHAKGGGALSAVSAT SPITFIGTGEH+DEFEPF+TQ FVGRLLGMGDVSGLVNTIKEAGLHENVEM KRITEG+FTLRDMYDQ +S++KLGPLNKVMGM+PGMSEMM+N  GVDGSVRIKRFQHIMDSMT+DEMENPK+NFT SRKERIARG GRHP EVEELL+EYKRFSKVVGKVGKMSKKNMNIDQLSRNTS       DPRMMA
Sbjct:    1 MVLESLGGRITGALRKMTNSTVIDEEALKEMLKEIAHALLEADVNIKSVVELRKNVTNRVNLEELAAGVNKRKLIQKAVFDELCSMLDPGTKPVQMKRGKPNVVMFVGLQGNGKTTSCVKYAYYHQRKGWKACLVCADTFRAGAFDQLKQSATKAKVPFYGSYTETDPVKIAADGVDRFRNEGYDLIIVDTSGRHKQEDSLFAEMEQMAQAVDPNDIIFVMDSAIGQAAHDQAQAFKSKVKVGSVIITKLDGHAKGGGALSAVSATESPITFIGTGEHIDEFEPFNTQNFVGRLLGMGDVSGLVNTIKEAGLHENVEMVKRITEGIFTLRDMYDQFDSLAKLGPLNKVMGMLPGMSEMMQNAKGVDGSVRIKRFQHIMDSMTVDEMENPKMNFTQSRKERIARGCGRHPQEVEELLMEYKRFSKVVGKVGKMSKKNMNIDQLSRNTSQTFQQFMDPRMMA 460          
BLAST of Ggra3610.t1 vs. uniprot
Match: A0A5J4YTS9 (Signal recognition particle 54 kDa protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YTS9_PORPP)

HSP 1 Score: 651 bits (1680), Expect = 1.100e-230
Identity = 338/464 (72.84%), Postives = 382/464 (82.33%), Query Frame = 0
Query:    1 MVLEGLGSRITGALRKMTNSTVIDEEALKEMLKEITHALLEADVNIKNVAQLRKNVTNRVKLEELAAGVNKRKLIQKAVFDELCSMLDPETKPVVLKRGKPNVVMFVGLQGNGKTTSCVKYAYYHQRKGWKPGLVCADTFRAGAFDQLKQNATKAKVPFIGSYTETDPVKIATDGVERFKNEKCDLIIVDTSGRHKQEQALFAEMEQMADTLKPTDIIFVMDSSIGQAAYDQALAFKNKVSVGSVIITKLDGHAKGGGALSAVSATRSPITFIGTGEHMDEFEPFDTQAFVGRLLGMGDVSGLVNTIKEAGLHENVEMYKRITEGVFTLRDMYDQLESISKLGPLNKVMGMIPGMSEMMKNTNGVDGSVRIKRFQHIMDSMTMDEMENPKVNFTASRKERIARGSGRHPVEVEELLVEYKRFSKVVGKVGKMSK-KNMNIDQLSR----NTSXXXXXXXDPRMM 459
            MVL  LG +IT ALR+MTNSTVIDE+AL +MLKE++ ALLEADVN++ VAQLR NV  RV LEELAAGVNKRKLIQKAVF+ELC MLDP  KPV LK+GKPNVVMFVGLQGNGKTTSC KYAYYHQRKGWK  LVCADTFRAGAFDQLKQNATKAK+PF GSYTETDPVKIA +GVERFK +  +LIIVDTSGRHKQE ALF EM+QMADT++P DI+FVMDSSIGQAAYDQALAFK  V VGSVIITKLDGHAKGGGALSAVSAT SPI FIGTGEHMD+ E F++ +FV RLLGMGDVSGLV +IKEAGL +N EMYKR+ EG FTLRDMYDQ  +ISKLGPL KVMGMIPGMSEM+      +G  R+ +F  IMDSMT DE++N KV F+ SR  R+ARGSG HP  VEELLVE+KRF +VV ++GKM   K  N++++S+    N S       DPRM+
Sbjct:    1 MVLNELGKKITSALRRMTNSTVIDEQALDDMLKEVSRALLEADVNVRIVAQLRTNVKKRVNLEELAAGVNKRKLIQKAVFEELCEMLDPGNKPVALKKGKPNVVMFVGLQGNGKTTSCAKYAYYHQRKGWKTCLVCADTFRAGAFDQLKQNATKAKIPFYGSYTETDPVKIALEGVERFKADNYELIIVDTSGRHKQESALFEEMQQMADTIQPADIVFVMDSSIGQAAYDQALAFKQAVKVGSVIITKLDGHAKGGGALSAVSATESPIVFIGTGEHMDDLEAFNSVSFVQRLLGMGDVSGLVTSIKEAGLDQNPEMYKRVMEGQFTLRDMYDQFSNISKLGPLGKVMGMIPGMSEMIPKGKEEEGGARVAKFCSIMDSMTDDELDNAKVTFSPSRILRVARGSGCHPRLVEELLVEHKRFRQVVERMGKMKALKGGNMNEMSKTMPANLSAQLSKAMDPRML 464          
BLAST of Ggra3610.t1 vs. uniprot
Match: A0A7S0ZHG9 (Signal recognition particle 54 kDa protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZHG9_9RHOD)

HSP 1 Score: 643 bits (1659), Expect = 1.530e-227
Identity = 331/464 (71.34%), Postives = 379/464 (81.68%), Query Frame = 0
Query:    1 MVLEGLGSRITGALRKMTNSTVIDEEALKEMLKEITHALLEADVNIKNVAQLRKNVTNRVKLEELAAGVNKRKLIQKAVFDELCSMLDPETKPVVLKRGKPNVVMFVGLQGNGKTTSCVKYAYYHQRKGWKPGLVCADTFRAGAFDQLKQNATKAKVPFIGSYTETDPVKIATDGVERFKNEKCDLIIVDTSGRHKQEQALFAEMEQMADTLKPTDIIFVMDSSIGQAAYDQALAFKNKVSVGSVIITKLDGHAKGGGALSAVSATRSPITFIGTGEHMDEFEPFDTQAFVGRLLGMGDVSGLVNTIKEAGLHENVEMYKRITEGVFTLRDMYDQLESISKLGPLNKVMGMIPGMSEMMKNTNGVDGSVRIKRFQHIMDSMTMDEMENPKVNFTASRKERIARGSGRHPVEVEELLVEYKRFSKVVGKVGKMSK-KNMNIDQLSR----NTSXXXXXXXDPRMM 459
            MVL  LG +IT ALR+MTN+TVIDE+ L +MLKE+  ALLEADVN+K+VAQLR NV  RV LEELAAGVNKRKLIQKAVFDELC MLDP  KPV LK+GKPNVVMFVGLQGNGKTTSC KYAYYHQR+GWK  +VCADTFRAGAFDQLKQNATKAK+PF GSYTETDPVKIA +GV+RFK +  +LI+VDTSGRH+QE ALF EME M D L P D++FVMDSSIGQAAY+ A AF+++V VGSVI+TKLDGHAKGGGALSAVSAT SPITFIGTGEHMDE EPF+  +FV RLLGMGDVSGLV T+KEAG+  N E+YKR+ EG FTLRDMYDQ ++ISKLGPL KVMGMIPGMSEM+      +G+ RI +F  +MDSMT DE++N KV F+ASR  RIARGSG HP  VEELLVEYKRFSKVV ++GKM   K   ++ +S+    N S       DPRM+
Sbjct:    1 MVLNELGKKITSALRRMTNTTVIDEQVLDDMLKEVARALLEADVNVKHVAQLRSNVKRRVNLEELAAGVNKRKLIQKAVFDELCEMLDPGNKPVTLKKGKPNVVMFVGLQGNGKTTSCAKYAYYHQRRGWKTCMVCADTFRAGAFDQLKQNATKAKIPFYGSYTETDPVKIAKEGVDRFKADHYELIVVDTSGRHRQESALFDEMEMMFDVLNPADVVFVMDSSIGQAAYEHAKAFRSRVKVGSVIVTKLDGHAKGGGALSAVSATESPITFIGTGEHMDELEPFNAVSFVQRLLGMGDVSGLVTTMKEAGIDNNPELYKRVMEGQFTLRDMYDQFQNISKLGPLGKVMGMIPGMSEMIPKGKEDEGAARIGKFCVMMDSMTDDELDNQKVVFSASRILRIARGSGCHPRMVEELLVEYKRFSKVVERMGKMKGLKGAGMNDMSKGMPANLSSQLTKAMDPRML 464          
BLAST of Ggra3610.t1 vs. uniprot
Match: A0A7S1XFD6 (Signal recognition particle 54 kDa protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XFD6_9RHOD)

HSP 1 Score: 621 bits (1601), Expect = 8.040e-219
Identity = 314/459 (68.41%), Postives = 371/459 (80.83%), Query Frame = 0
Query:    1 MVLEGLGSRITGALRKMTNSTVIDEEALKEMLKEITHALLEADVNIKNVAQLRKNVTNRVKLEELAAGVNKRKLIQKAVFDELCSMLDPETKPVVLKRGKPNVVMFVGLQGNGKTTSCVKYAYYHQRKGWKPGLVCADTFRAGAFDQLKQNATKAKVPFIGSYTETDPVKIATDGVERFKNEKCDLIIVDTSGRHKQEQALFAEMEQMADTLKPTDIIFVMDSSIGQAAYDQALAFKNKVSVGSVIITKLDGHAKGGGALSAVSATRSPITFIGTGEHMDEFEPFDTQAFVGRLLGMGDVSGLVNTIKEAGLHENVEMYKRITEGVFTLRDMYDQLESISKLGPLNKVMGMIPGMSEMMKNTNGVDGSVRIKRFQHIMDSMTMDEMENPKVNFTASRKERIARGSGRHPVEVEELLVEYKRFSKVVGKVGKMSKKNMNIDQLSRNTSXXXXXXXDPRMM 459
            MVL  LG +I GALRKMTN T+ID+EA+  MLKEI+ ALLEADVN+K VAQLR NV   V L+ELAAG NKR++IQKAVFDELC MLD   KPVVLK+GKPNVVMFVGLQGNGKTTSCVKYAYYHQRKGWK  +VCADTFRAGAFDQL+QN  KAK+P+ GSY+ETDPVKIA DGVERF+ EK +LI+VDTSGRHKQE ALF EMEQMA  ++P D++FVMDSSIGQAA+D ALAF+ +V VGSVIITKLDGHAKGGGALSAVSAT+SPITFIG GEH+DEFEPF TQ FVGRLLG+GDVSGLV TIKEAGLH+N ++Y+ IT GVFTLRD+YDQ ++++KLGPL ++M M+PGMSEMM      +G  +I++F  +MDSMT  E+++ K  F+ SR  RIARGSGR   +V EL+ E+KRF+K+VGK+GKM        +   N         DPRM+
Sbjct:    1 MVLNDLGKKINGALRKMTNLTIIDDEAVDAMLKEISRALLEADVNVKTVAQLRGNVKKSVNLDELAAGHNKRRMIQKAVFDELCKMLDSGRKPVVLKKGKPNVVMFVGLQGNGKTTSCVKYAYYHQRKGWKTCVVCADTFRAGAFDQLRQNCLKAKIPYYGSYSETDPVKIAMDGVERFRIEKYELIVVDTSGRHKQEAALFEEMEQMAAAIEPNDVVFVMDSSIGQAAHDHALAFRQRVDVGSVIITKLDGHAKGGGALSAVSATQSPITFIGVGEHIDEFEPFSTQNFVGRLLGLGDVSGLVTTIKEAGLHDNQKLYENITHGVFTLRDLYDQFQALTKLGPLGQLMSMMPGMSEMMPAGGEREGKAKIQKFLTMMDSMTDKELDDAKAQFSESRMYRIARGSGRSLQDVNELIHEHKRFAKLVGKLGKMKGMKTGNAKDLENMPQQLSRIMDPRML 459          
BLAST of Ggra3610.t1 vs. uniprot
Match: M2Y539 (Signal recognition particle 54 kDa protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y539_GALSU)

HSP 1 Score: 594 bits (1532), Expect = 2.110e-208
Identity = 294/460 (63.91%), Postives = 367/460 (79.78%), Query Frame = 0
Query:    1 MVLEGLGSRITGALRKMTNSTVIDEEALKEMLKEITHALLEADVNIKNVAQLRKNVTNRVKLEELAAGVNKRKLIQKAVFDELCSMLDPETKPVVLKRGKPNVVMFVGLQGNGKTTSCVKYAYYHQRKGWKPGLVCADTFRAGAFDQLKQNATKAKVPFIGSYTETDPVKIATDGVERFKNEKCDLIIVDTSGRHKQEQALFAEMEQMADTLKPTDIIFVMDSSIGQAAYDQALAFKNKVSVGSVIITKLDGHAKGGGALSAVSATRSPITFIGTGEHMDEFEPFDTQAFVGRLLGMGDVSGLVNTIKEAGLHENVEMYKRITEGVFTLRDMYDQLESISKLGPLNKVMGMIPGMSEMMKNTNGVDGSVRIKRFQHIMDSMTMDEMENPKVNFTASRKERIARGSGRHPVEVEELLVEYKRFSKVVGKVGK-MSKKNMNIDQLSRNTSXXXXXXXDPRMM 459
            MVL  LG +I+GALRK+ N TV+DEEAL EML E++ ALLEADVN+K V  LR++V  +V LEELAAGVN+RKLIQKAVF+ELC+ML P T P  LK+G+PNVVMFVGLQGNGKTT+CVKYAYYHQRKGWK  LVCADTFRAGAFDQLKQ+ATKA+VPF GS+TETD VK+A +GV+ F+ EK +LIIVDTSGRHKQ+ ALF EMEQ+A  ++P  IIFVMD ++GQ+ YDQALAF+ +V+VGSV++TKLDGHAKGGGALSAVSAT+SP+ FIGTGE +D+ EPF  Q+FV RLLG+GD+SG VN +KEAG+ +N ++ KRI EGV TLRD+YDQ +S+ K+GP+ KV+ M PGM +++      +G++R+K+F  IM+SMT DE++NPKV F  SR  RI RGSGR   +VE+LL EYKR SK+V +VGK  + K  +  QL RN         DP+M+
Sbjct:    1 MVLSELGKKISGALRKLANRTVVDEEALNEMLNEVSRALLEADVNVKMVQALRQSVKKKVNLEELAAGVNRRKLIQKAVFEELCNMLSPGTSPPPLKKGRPNVVMFVGLQGNGKTTTCVKYAYYHQRKGWKTALVCADTFRAGAFDQLKQSATKARVPFYGSHTETDAVKVAREGVDLFRKEKYELIIVDTSGRHKQDTALFEEMEQIAQAVQPNSIIFVMDGTMGQSVYDQALAFRQRVNVGSVVVTKLDGHAKGGGALSAVSATKSPVVFIGTGEMLDDLEPFAPQSFVQRLLGLGDISGFVNAVKEAGVDQNPDILKRIQEGVLTLRDLYDQFQSVLKMGPMGKVLSMFPGMQDLIPKGKEREGTLRVKKFLSIMNSMTDDELDNPKVQFNQSRMIRIGRGSGRDVKDVEDLLAEYKRLSKLVSRVGKNKALKTGDFSQLQRNMPQQLSRMMDPKML 460          
BLAST of Ggra3610.t1 vs. uniprot
Match: A0A1X6NR23 (Signal recognition particle 54 kDa protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NR23_PORUM)

HSP 1 Score: 588 bits (1515), Expect = 1.950e-205
Identity = 302/436 (69.27%), Postives = 359/436 (82.34%), Query Frame = 0
Query:    1 MVLEGLGSRITGALRKMTNSTVIDEEALKEMLKEITHALLEADVNIKNVAQLRKNVTNRVKLEELAAGVNKRKLIQKAVFDELCSMLDPETKPVVLKRGK-PNVVMFVGLQGNGKTTSCVKYAYYHQRKGWKPGLVCADTFRAGAFDQLKQNATKAKVPFIGSYTETDPVKIATDGVERFKNEKCDLIIVDTSGRHKQEQALFAEMEQMADTLKPTDIIFVMDSSIGQAAYDQALAFKNKVSVGSVIITKLDGHAKGGGALSAVSATRSPITFIGTGEHMDEFEPFDTQAFVGRLLGMGDVSGLVNTIKEAGLHENVEMYKRITEGVFTLRDMYDQLESISKLGPLNKVMGMIPGMSEMMKNT---NGVDGSVRIKRFQHIMDSMTMDEMENPKVNFTASRKERIARGSGRHPVEVEELLVEYKRFSKVVGKVGKM 432
            MVL  LG +I+ A+++M+ +TV DE  LK+ML EI  ALLEADVN++ V QLR NV   V L  L AGVNK KLIQKAVFDELC MLD   KPV LKRG   NVVMFVGLQGNGKTT+C KYAY++ RKGWK  LVCADTFRAGAFDQLKQNATKAK+PF GSYTETDPV IAT GV+RF+ E+ DLI+VDTSGRHKQE ALF EMEQMA  ++PTDI+FVMDSSIGQAA+DQA AF+++V+VGSVIITKLDGHAKGGGALSAV+ATRSPITFIGTGEH+DEFEPF  + FVGRLLGMGDVSGL++TI++AGL  N +M KR+T GVFTLRDM +Q E I+++GPL+KVMGMIPG+S+M+      NG +G+ RI+ F ++MD+MT +E++NPK+ +  SR  R+ARGSGRHP EVE LL EYKRF+K+V  VG M
Sbjct:    1 MVLNELGGKISAAIKRMSANTVPDETVLKQMLSEIARALLEADVNVRAVQQLRGNVLAAVDLSALGAGVNKVKLIQKAVFDELCRMLDAGQKPVALKRGHGSNVVMFVGLQGNGKTTTCAKYAYHYSRKGWKTCLVCADTFRAGAFDQLKQNATKAKIPFYGSYTETDPVAIATAGVDRFRAERYDLIVVDTSGRHKQEVALFDEMEQMAAAVEPTDIVFVMDSSIGQAAHDQAAAFRSRVAVGSVIITKLDGHAKGGGALSAVAATRSPITFIGTGEHIDEFEPFAAERFVGRLLGMGDVSGLMSTIQDAGLANNPDMVKRLTGGVFTLRDMNEQFEGIARMGPLDKVMGMIPGLSQMLPEGAAGNGSEGAKRIQVFGYMMDAMTDEELDNPKIVWCQSRIRRVARGSGRHPAEVEGLLTEYKRFAKMVQSVGSM 436          
BLAST of Ggra3610.t1 vs. uniprot
Match: A0A7S2ZCB6 (Signal recognition particle 54 kDa protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZCB6_9RHOD)

HSP 1 Score: 580 bits (1495), Expect = 8.440e-203
Identity = 299/445 (67.19%), Postives = 357/445 (80.22%), Query Frame = 0
Query:    1 MVLEGLGSRITGALRKMTNSTVIDEEALKEMLKEITHALLEADVNIKNVAQLRKNVTNRVKLEELAAGVNKRKLIQKAVFDELCSMLDPETKPVVLKRGKPNVVMFVGLQGNGKTTSCVKYAYYHQRKGWKPGLVCADTFRAGAFDQLKQNATKAKVPFIGSYTETDPVKIATDGVERFKNEKCDLIIVDTSGRHKQEQALFAEMEQMADTLKPTDIIFVMDSSIGQAAYDQALAFKNKVSVGSVIITKLDGHAKGGGALSAVSATRSPITFIGTGEHMDEFEPFDTQAFVGRLLGMGDVSGLVNTIKEAGLHENVEMYKRITEGVFTLRDMYDQLESISKLGPLNKVMGMIPGMSEMMKNTNGVDGSVRIKRFQHIMDSMTMDEMENPKVNFTASRKERIARGSGRHPVEVEELLVEYKRFSKVVGKVGKMSK-KNMNIDQLSR 444
            MVL  LG RI  A+R M+++TVIDE  +KEML EI+ ALLEADVNIK VAQL+  V NRVK EELAAGVNKRK+IQ AV DELC++LD    PV LK+GK NV+MFVGLQGNGKTT+CVKYA+YHQRKGWK  LVCADTFRAGAFDQLKQNATKA++PF GSYTETDPVK+A +GV RFK +K +LIIVDTSGRHKQE+ALF EMEQM++ + P DIIFVMDSSIGQAA DQA AF++ VSVGSVI+TKLDGHAKGGGALSAVS T SPITFIG GEHM +FEPF+TQ+FVGRLLG+GD+SGL+N I EA + ++V  Y+RI EG FTLRDM DQ E+I KLGPL+ VM M+P M  ++    G +G  R+K+F  IMDSMT  E++NPK+ FT  R+ RIARG+G  P +V  LL ++K F+ VV K+G M   KN N++ L +
Sbjct:    1 MVLGDLGKRINRAIRLMSDATVIDEAVVKEMLNEISKALLEADVNIKYVAQLKNRVLNRVKFEELAAGVNKRKMIQGAVVDELCALLDSGRDPVPLKKGKSNVIMFVGLQGNGKTTTCVKYAHYHQRKGWKTALVCADTFRAGAFDQLKQNATKARIPFYGSYTETDPVKLAIEGVNRFKLDKFELIIVDTSGRHKQEKALFEEMEQMSEAVNPNDIIFVMDSSIGQAAEDQAKAFRSSVSVGSVIVTKLDGHAKGGGALSAVSGTGSPITFIGIGEHMTDFEPFNTQSFVGRLLGLGDISGLMNMINEADIDKDV--YERIAEGHFTLRDMRDQFENIGKLGPLSSVMTMLPHMQNLLPAGKGKEGEERVKQFMVIMDSMTDAELDNPKIQFTTEREMRIARGAGVFPTDVRMLLKQHKEFAGVVEKMGSMKGLKNGNVNMLGK 443          
BLAST of Ggra3610.t1 vs. uniprot
Match: L1K0T6 (Signal recognition particle 54 kDa protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1K0T6_GUITC)

HSP 1 Score: 562 bits (1449), Expect = 1.280e-195
Identity = 286/465 (61.51%), Postives = 360/465 (77.42%), Query Frame = 0
Query:    1 MVLEGLGSRITGALRKMTNSTVIDEEALKEMLKEITHALLEADVNIKNVAQLRKNVTNRVKLEELAAGVNKRKLIQKAVFDELCSMLDPETKPVVLKRGKPNVVMFVGLQGNGKTTSCVKYAYYHQRKGWKPGLVCADTFRAGAFDQLKQNATKAKVPFIGSYTETDPVKIATDGVERFKNEKCDLIIVDTSGRHKQEQALFAEMEQMADTLKPTDIIFVMDSSIGQAAYDQALAFKNKVSVGSVIITKLDGHAKGGGALSAVSATRSPITFIGTGEHMDEFEPFDTQAFVGRLLGMGDVSGLVNTIKEAGLHENVEMYKRITEGVFTLRDMYDQLESISKLGPLNKVMGMIPGMSEMMKNTNGVDGSVRIKRFQHIMDSMTMDEMENPKVN--FTASRKERIARGSGRHPVEVEELLVEYKRFSKVVGKVGKMS-KKNMNIDQLSRNTSXXXXXXX---DPRMM 459
            MVL  LG RI  A+R MT+ TVIDEEA+  MLKEI+ ALL +DVN+K V+ LRKNV NR+ LE+LA G+N+R++IQ+AVF+ELC ML+P  KP   K+GKPNV+MFVGLQG+GKTTSC KYA ++QRK WK  LVC+DTFRAGAFDQLKQNATKA++PF GSYTE DPVKIA DGVE FK E  ++IIVDTSGRHKQE +LF EM+Q+A  ++P DI+FV+DSSIGQAA+DQA AFK  VSVGSVI+TKLDGHAKGGGALSAV+AT SPI FIGTGEH D+FE F+ ++FV RLLG+GDV GL+N IK+AGL +  E+Y+++++GVFTLRDMY+Q +++ K+GP+ KVM MIPGMS +M      +   R K+F  IMDSMT DE++   VN  FT +R  RIA+GSG HP +V EL+ E+KRF K++ K+  +   KN  + Q++RN            DPRM+
Sbjct:    1 MVLAELGGRIAQAMRSMTSKTVIDEEAVDNMLKEISSALLSSDVNVKLVSSLRKNVKNRINLEDLATGLNRRRMIQQAVFEELCEMLNPGKKPYQPKKGKPNVIMFVGLQGSGKTTSCTKYALHYQRKSWKTCLVCSDTFRAGAFDQLKQNATKARIPFYGSYTERDPVKIARDGVEMFKKEGQEIIIVDTSGRHKQEASLFEEMQQIAAAVEPDDIVFVLDSSIGQAAHDQATAFKEAVSVGSVIMTKLDGHAKGGGALSAVAATSSPIVFIGTGEHFDDFETFEVRSFVSRLLGLGDVGGLMNAIKDAGLDKQPELYQKLSQGVFTLRDMYEQFQNVMKMGPIGKVMSMIPGMSALMTKGREHESQERFKKFMTIMDSMTDDELDTENVNKIFTDTRVFRIAQGSGSHPQQVWELIEEFKRFQKMIAKMKHLKIGKNGEMPQMTRNPQQAMQQMGKCLDPRML 465          
BLAST of Ggra3610.t1 vs. uniprot
Match: A0A6U4SDV9 (Signal recognition particle 54 kDa protein n=3 Tax=Hemiselmis TaxID=77924 RepID=A0A6U4SDV9_HEMAN)

HSP 1 Score: 562 bits (1449), Expect = 3.180e-195
Identity = 291/465 (62.58%), Postives = 354/465 (76.13%), Query Frame = 0
Query:    1 MVLEGLGSRITGALRKMTNSTVIDEEALKEMLKEITHALLEADVNIKNVAQLRKNVTNRVKLEELAAGVNKRKLIQKAVFDELCSMLDPETKPVVLKRGKPNVVMFVGLQGNGKTTSCVKYAYYHQRKGWKPGLVCADTFRAGAFDQLKQNATKAKVPFIGSYTETDPVKIATDGVERFKNEKCDLIIVDTSGRHKQEQALFAEMEQMADTLKPTDIIFVMDSSIGQAAYDQALAFKNKVSVGSVIITKLDGHAKGGGALSAVSATRSPITFIGTGEHMDEFEPFDTQAFVGRLLGMGDVSGLVNTIKEAGLHENVEMYKRITEGVFTLRDMYDQLESISKLGPLNKVMGMIPGMSEMMKNTNGVDGSVRIKRFQHIMDSMTMDEM--ENPKVNFTASRKERIARGSGRHPVEVEELLVEYKRFSKVVGKVGKMS-KKNMNIDQLSRNTSXXXXXXX---DPRMM 459
            MVL  LG RI+ ALR MT +T++DEEA+  MLKEI  ALL ADVNIK VA+LRKNV NR+ L+ELA G+N+RK+IQ+AVFDELC ML P  KP V K+G+PNV+MFVGLQG+GKTTSC K+A ++ RK WK  LVCADTFRAGAFDQLKQNATKA++PF GSYTE DPVKIA DGV+ FK E  ++IIVDTSGRHKQE +LF EM+Q++  + P D++FV+DSSIGQAA DQA AFK  VSVGSVI+TKLDGHAKGGGALSAV+AT SPI FIGTGEH D+FE F+ ++FV RLLGMGDV GL+N IK+AGL +  E+Y+++ +GVFTLRDMY+Q +++ K+GPL KVM MIPGMS MM      +   R K+F  IMDSM  DE+  EN     T SR  RIA+GSG HP  V ELL E+KRF K+VGK+  +   KN  + Q++RN            DPRM+
Sbjct:   28 MVLADLGGRISAALRTMTTNTILDEEAVDAMLKEIGTALLAADVNIKLVAKLRKNVKNRINLDELATGMNRRKMIQQAVFDELCDMLSPPVKPYVPKKGRPNVIMFVGLQGSGKTTSCTKFALHYHRKSWKTALVCADTFRAGAFDQLKQNATKARIPFYGSYTERDPVKIAQDGVDMFKAEGQEIIIVDTSGRHKQEASLFEEMQQISAAVSPDDVVFVLDSSIGQAAQDQAQAFKETVSVGSVIMTKLDGHAKGGGALSAVAATESPIVFIGTGEHFDDFEVFEVRSFVSRLLGMGDVGGLMNAIKDAGLDKQPELYQKLQQGVFTLRDMYEQFQNVMKMGPLGKVMSMIPGMSAMMTKGKEHESQARFKKFMTIMDSMNDDELDTENTTKMMTESRVFRIAQGSGSHPQHVWELLEEFKRFQKMVGKMKHLKIGKNGEMPQMNRNQKQAMQQMGKCLDPRML 492          
The following BLAST results are available for this feature:
BLAST of Ggra3610.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IJZ62.060e-29690.87Signal recognition particle 54 kDa protein n=1 Tax... [more]
R7QA534.150e-28687.39Signal recognition particle 54 kDa protein n=1 Tax... [more]
A0A5J4YTS91.100e-23072.84Signal recognition particle 54 kDa protein n=1 Tax... [more]
A0A7S0ZHG91.530e-22771.34Signal recognition particle 54 kDa protein n=1 Tax... [more]
A0A7S1XFD68.040e-21968.41Signal recognition particle 54 kDa protein n=1 Tax... [more]
M2Y5392.110e-20863.91Signal recognition particle 54 kDa protein n=1 Tax... [more]
A0A1X6NR231.950e-20569.27Signal recognition particle 54 kDa protein n=1 Tax... [more]
A0A7S2ZCB68.440e-20367.19Signal recognition particle 54 kDa protein n=2 Tax... [more]
L1K0T61.280e-19561.51Signal recognition particle 54 kDa protein n=1 Tax... [more]
A0A6U4SDV93.180e-19562.58Signal recognition particle 54 kDa protein n=3 Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000897Signal recognition particle, SRP54 subunit, GTPase domainSMARTSM00962SRP54_3coord: 101..296
e-value: 7.5E-93
score: 324.5
IPR000897Signal recognition particle, SRP54 subunit, GTPase domainPFAMPF00448SRP54coord: 101..296
e-value: 2.1E-75
score: 252.7
IPR000897Signal recognition particle, SRP54 subunit, GTPase domainPROSITEPS00300SRP54coord: 269..282
IPR013822Signal recognition particle SRP54, helical bundleSMARTSM00963SRP54_N_2coord: 2..87
e-value: 2.2E-20
score: 83.7
IPR013822Signal recognition particle SRP54, helical bundlePFAMPF02881SRP54_Ncoord: 6..83
e-value: 2.6E-20
score: 72.4
IPR004125Signal recognition particle, SRP54 subunit, M-domainPFAMPF02978SRP_SPBcoord: 327..425
e-value: 7.0E-31
score: 106.9
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 91..285
e-value: 4.9E-126
score: 421.7
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 96..298
IPR042101Signal recognition particle SRP54, N-terminal domain superfamilyGENE3D1.20.120.140coord: 6..305
e-value: 4.9E-126
score: 421.7
IPR036891Signal recognition particle, SRP54 subunit, M-domain superfamilyGENE3D1.10.260.30coord: 311..443
e-value: 7.1E-39
score: 134.9
IPR036891Signal recognition particle, SRP54 subunit, M-domain superfamilySUPERFAMILY47446Signal peptide-binding domaincoord: 298..429
IPR006325Signal recognition particle, SRP54 subunit, eukaryoticTIGRFAMTIGR01425TIGR01425coord: 2..424
e-value: 1.9E-195
score: 647.7
NoneNo IPR availablePANTHERPTHR11564:SF5SIGNAL RECOGNITION PARTICLE 54 KDA PROTEINcoord: 1..483
NoneNo IPR availableCDDcd17875SRP54_Gcoord: 102..294
e-value: 3.8759E-135
score: 386.548
IPR022941Signal recognition particle, SRP54 subunitPANTHERPTHR11564SIGNAL RECOGNITION PARTICLE 54K PROTEIN SRP54coord: 1..483
IPR022941Signal recognition particle, SRP54 subunitHAMAPMF_00306SRP54coord: 6..472
score: 35.183163
IPR036225SRP/SRP receptor, N-terminalSUPERFAMILY47364Domain of the SRP/SRP receptor G-proteinscoord: 1..93

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000850_piloncontigtig00000850_pilon:259213..260700 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra3610.t1Ggra3610.t1Gracilaria gracilis GNS1m malemRNAtig00000850_pilon 259213..260700 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra3610.t1 ID=Ggra3610.t1|Name=Ggra3610.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=496bp
MVLEGLGSRITGALRKMTNSTVIDEEALKEMLKEITHALLEADVNIKNVA
QLRKNVTNRVKLEELAAGVNKRKLIQKAVFDELCSMLDPETKPVVLKRGK
PNVVMFVGLQGNGKTTSCVKYAYYHQRKGWKPGLVCADTFRAGAFDQLKQ
NATKAKVPFIGSYTETDPVKIATDGVERFKNEKCDLIIVDTSGRHKQEQA
LFAEMEQMADTLKPTDIIFVMDSSIGQAAYDQALAFKNKVSVGSVIITKL
DGHAKGGGALSAVSATRSPITFIGTGEHMDEFEPFDTQAFVGRLLGMGDV
SGLVNTIKEAGLHENVEMYKRITEGVFTLRDMYDQLESISKLGPLNKVMG
MIPGMSEMMKNTNGVDGSVRIKRFQHIMDSMTMDEMENPKVNFTASRKER
IARGSGRHPVEVEELLVEYKRFSKVVGKVGKMSKKNMNIDQLSRNTSQTF
QQFMDPRMMAQLGGQGGMQSMMKQLAKSMDGKGGLGALAGLKGLK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000897SRP54_GTPase_dom
IPR013822Signal_recog_particl_SRP54_hlx
IPR004125Signal_recog_particle_SRP54_M
IPR027417P-loop_NTPase
IPR042101SRP54_N_sf
IPR036891Signal_recog_part_SRP54_M_sf
IPR006325SRP54_euk
IPR022941SRP54
IPR036225SRP/SRP_N