Ggra361.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra361.t1
Unique NameGgra361.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length289
Homology
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BLAST of Ggra361.t1 vs. uniprot
Match: A0A2V3IIT7 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IIT7_9FLOR)

HSP 1 Score: 345 bits (885), Expect = 1.480e-116
Identity = 187/294 (63.61%), Postives = 214/294 (72.79%), Query Frame = 0 
Query:    1 MYSFQAFLAALILSLSIVSGISISDSIIWSSDNITAKTIRDTTSGDLYASGHQKVAYDDVALSGDGGFDLF----NTSVRAARCATFQDNANLNSFAAFNIANSGARITYHNGNNNNGGNPFQVRATRTDIRVTETSYNARLGSEPYNNGVPPGWQTMLNQVGGNVNGVHRGHLGPARLGGSGLDVRNIAAMYQRVNTRHLAIWERMVNAAFDNNLVPEPDCIDYRCIAYY-APGRDSPDSVRTTAWLIRNNN-RQMWFDVTIPNQPNLPGTAATIHWDATANLFPSLNHRGRP 288
            M+ FQ F+AAL+L L I SG SI D II + D+I    ++      +  +G+  +  +D        FDL     N+  R  R ATF D AN+N FAA NIAN+GA ITY  GNNNNG N F V+AT+  +RVT TSY ARLGS  YNNG PPGW  ML QVGGNVN VHRGHL P RLGGSGLDVRNI AMY RVN+RHLAIWERMVNAAFDNNLVP+P+CI+YRCIAYY A GRDSPD+VRTTAWLIR     ++WFDVTIPNQPNL GTAA IH D TAN+FPSLN+RGRP
Sbjct:    2 MHFFQPFIAALLLFLPIASGASIPDEIITTGDSIKLSNLQR-----VVVTGNLSILEEDE-------FDLESEARNSVARPTRFATFNDQANINRFAAANIANTGAGITYTQGNNNNGQNMFNVQATQATVRVTATSYAARLGSSAYNNGCPPGWNAMLAQVGGNVNRVHRGHLVPQRLGGSGLDVRNIVAMYGRVNSRHLAIWERMVNAAFDNNLVPQPECIEYRCIAYYGAAGRDSPDAVRTTAWLIRPGQPNRVWFDVTIPNQPNLAGTAAHIHIDDTANMFPSLNNRGRP 283
The following BLAST results are available for this feature:
BLAST of Ggra361.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IIT71.480e-11663.61Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR044929DNA/RNA non-specific endonuclease superfamilyGENE3D3.40.570.10Extracellular Endonuclease, subunit Acoord: 114..263
e-value: 8.6E-13
score: 50.0
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..288
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
NoneNo IPR availableTMHMMTMhelixcoord: 7..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000950_piloncontigtig00000950_pilon:156846..157712 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra361.t1Ggra361.t1Gracilaria gracilis GNS1m malemRNAtig00000950_pilon 156846..157712 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra361.t1 ID=Ggra361.t1|Name=Ggra361.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=289bp
MYSFQAFLAALILSLSIVSGISISDSIIWSSDNITAKTIRDTTSGDLYAS
GHQKVAYDDVALSGDGGFDLFNTSVRAARCATFQDNANLNSFAAFNIANS
GARITYHNGNNNNGGNPFQVRATRTDIRVTETSYNARLGSEPYNNGVPPG
WQTMLNQVGGNVNGVHRGHLGPARLGGSGLDVRNIAAMYQRVNTRHLAIW
ERMVNAAFDNNLVPEPDCIDYRCIAYYAPGRDSPDSVRTTAWLIRNNNRQ
MWFDVTIPNQPNLPGTAATIHWDATANLFPSLNHRGRP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR044929DNA/RNA_non-sp_Endonuclease_sf