Ggra3587.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra3587.t1
Unique NameGgra3587.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length341
Homology
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BLAST of Ggra3587.t1 vs. uniprot
Match: A0A2V3ILG5 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILG5_9FLOR)

HSP 1 Score: 102 bits (253), Expect = 2.060e-22
Identity = 58/138 (42.03%), Postives = 79/138 (57.25%), Query Frame = 0 
Query:  183 PCVETEWLKNNGFGDGILREHGVSKTLCMRG--LPCGTEGHLLRACDAHGRCKLQTFRDACALSGDCGVKYARVSRLSHGADWTRVRAARADGRSLTLTSLSVAVEGSWVRASYGVARVGDALIASGGGRAVDVAVLA 318
            PCVET WL  NG   G+L+ +  ++ LC+RG  LPCGT GHLLRAC  +G C+L+ + + CA  G C      VSRL    +W+ V  +   G SL LT LSV    S +  S+ +A +   +I  G G  +D AV+A
Sbjct:   24 PCVETSWLIANGHSSGVLQNYRATQVLCIRGASLPCGTAGHLLRACRRNGLCRLRCYAEVCAERGGCIKAVLPVSRLRLSVNWSAVSYSDEQG-SLALTPLSVRPFASRLSPSFLIAFLAHGMIRMGFGGVLDAAVVA 160
The following BLAST results are available for this feature:
BLAST of Ggra3587.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3ILG52.060e-2242.03Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 21..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..8
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 9..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 28..340
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..27

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000850_piloncontigtig00000850_pilon:173338..174470 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra3587.t1Ggra3587.t1Gracilaria gracilis GNS1m malemRNAtig00000850_pilon 173338..174470 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra3587.t1 ID=Ggra3587.t1|Name=Ggra3587.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=341bp
MKGRAAVKTLSVLGVVAIVCSSVCVSGASPSRSNTTLERNLTDALNELLG
KNASAVKLSKQVYCSSSSSCRSGCSCVGTQFYQSLGTLCLDSEQYYSEAS
LCSCSSDSDCGDFCVDRSYCYTCEGIAVSNALAACFYGSDSSSITIDAPA
SAPTTSAPDTVATGSAEGGANNNAQVVPSENEPCVETEWLKNNGFGDGIL
REHGVSKTLCMRGLPCGTEGHLLRACDAHGRCKLQTFRDACALSGDCGVK
YARVSRLSHGADWTRVRAARADGRSLTLTSLSVAVEGSWVRASYGVARVG
DALIASGGGRAVDVAVLALADFAAHARFLCHTAAAKLAAR*
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