Ggra3537.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra3537.t1
Unique NameGgra3537.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length277
Homology
BLAST of Ggra3537.t1 vs. uniprot
Match: A0A2V3J091 (Glutathione S-transferase T2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J091_9FLOR)

HSP 1 Score: 129 bits (325), Expect = 5.890e-32
Identity = 83/233 (35.62%), Postives = 126/233 (54.08%), Query Frame = 0
Query:   27 RGPSFTPQEDVGIARAYIKTSEDSILGTDRKKKLFFDAITKVYNELY--KPANRPSRSTESVRNRTKLLTTKCALFSGCFVRVIRLNPSAYNEEDKFRMPTALFNGIKMKSPKDDIGEPFKFKEAWEVLRNHPKF-----SIDEEITSTSSEADPSSTSRQQTCSKPGTPDQIEKKDVPSTEFSERPQGRKAAKMEFIKQKHYEEKLNVARQALRLQRERASEIKRQNDISLF 252
            RG +++ +EDV +A+A+++ SED I+G+++K   F+   TKV+NE    KP   P     S   R K +   C  FS C   V+   P+  N+ D  R+ TALFNG K+K P++DIG  FKF +AW +LR H KF     S  E    T + A PS+       S             P++  ++RP GR+ AK    KQ +  +K+ +A++A++ Q+ R + + R NDI LF
Sbjct:    7 RGFNYSTEEDVVLAKAWVRVSEDPIVGSEQKGYTFY---TKVWNEYKQAKPGELPFLPLASTSTRVKTILKHCVRFSACHSTVVGSKPTGVNDADIIRITTALFNGKKIKDPQEDIGRRFKFLDAWRILRFHEKFCAGGDSAVERQPPTGNAATPSNVPCADEVSDGSKSSSSSDVRPPTSRSTKRPVGRRKAKEIAQKQHNANKKIKIAQEAVKSQQNRNTALSRHNDILLF 236          
BLAST of Ggra3537.t1 vs. uniprot
Match: A0A2V3IMI1 (Glutathione S-transferase T3 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMI1_9FLOR)

HSP 1 Score: 125 bits (315), Expect = 6.690e-32
Identity = 57/139 (41.01%), Postives = 90/139 (64.75%), Query Frame = 0
Query:   21 AKKHTTRGPSFTPQEDVGIARAYIKTSEDSILGTDRKKKLFFDAITKVYNELYKPANRPSRSTESVRNRTKLLTTKCALFSGCFVRVIRLNPSAYNEEDKFRMPTALFNGIKMKSPKDDIGEPFKFKEAWEVLRNHPKF 159
            +KK   RG SF P ++ GIA+A++K SE+SI+GT +K   F+ A+T++YNE +KPANR  RS  S++ R  ++  +C +F+GC   ++R   +  + ED  +M TA++N I M    ++ G PFK   AW++LRN  K+
Sbjct:    7 SKKKIVRGSSFLPAKEEGIAKAWVKVSENSIVGTHQKGDAFYVAVTELYNETFKPANRVKRSVSSIKARCNIIRKECMIFNGCIDLLVRQEITGVSREDIIKMTTAVYNEINMNHVSEECGPPFKHYLAWKLLRNLDKY 145          
BLAST of Ggra3537.t1 vs. uniprot
Match: A0A2V3IIQ9 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IIQ9_9FLOR)

HSP 1 Score: 112 bits (279), Expect = 3.930e-27
Identity = 57/135 (42.22%), Postives = 81/135 (60.00%), Query Frame = 0
Query:   27 RGPSFTPQEDVGIARAYIKTSEDSILGTDRKKKLFFDAITKVYNELY--KPANRPSRSTESVRNRTKLLTTKCALFSGCFVRVIRLNPSAYNEEDKFRMPTALFNGIKMKSPKDDIGEPFKFKEAWEVLRNHPKF 159
            RG +++ +EDV +A+A+++ SED I+G+++K   F+   TKV+NE    KP   P     S   R K +   C  FS C   V    P+  N+ D  R+ TALFNG K+K P++DIG PFKF +AW +LR H KF
Sbjct:    7 RGFNYSTEEDVVLAKAWVRVSEDPIVGSEQKGNTFY---TKVWNEYKQAKPGELPLCPLASTSTRVKTILKHCVRFSACHSTVAGSQPTVVNDADIIRITTALFNGKKIKEPQEDIGRPFKFLDAWGILRFHEKF 138          
BLAST of Ggra3537.t1 vs. uniprot
Match: A0A2V3J4H6 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4H6_9FLOR)

HSP 1 Score: 90.1 bits (222), Expect = 5.660e-19
Identity = 46/125 (36.80%), Postives = 69/125 (55.20%), Query Frame = 0
Query:   21 AKKHTTRGPSFTPQEDVGIARAYIKTSEDSILGTDRKKKLFFDAITKVYNELYKPANRPSRSTESVRNRTKLLTTKCALFSGCFVRVIRLNPSAYNEEDKFRMPTALFNGIKMKSPKDDIGEPFK 145
            +KK   RG SFTP     IA++++  SE+  +GT +K   F+ A+T +Y E  KPANR  RS  S++   K +   C +F+GC  R+ R   +  +  D  +M TA+ NGI M    +D G P +
Sbjct:    7 SKKKMVRGSSFTP----AIAKSWVIVSENFTVGTQQKSDAFYVAVTHLYKETPKPANRVERSVSSIKAWCKTIPKDCMIFNGCNARLARQGITGVSPRDIIKMSTAVHNGINMSHVSEDCGPPLQ 127          
BLAST of Ggra3537.t1 vs. uniprot
Match: A0A7S4KMN4 (Hypothetical protein (Fragment) n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4KMN4_9EUKA)

HSP 1 Score: 67.4 bits (163), Expect = 3.120e-9
Identity = 42/148 (28.38%), Postives = 71/148 (47.97%), Query Frame = 0
Query:   20 EAKKHTTRGP--------SFTPQEDVGIARAYIKTSEDSILGTDRKKKLFFDAITKVYNELYKPANRPSRSTESVRNRTKLLTTKCALFSGCFVRVIRLNPSAYNEEDKFRMPTALFNGIKMKSPKDDIGEPFKFKEAWEVLRNHPKF 159
            E   +  RGP        ++T  ED  +  +Y+ TSED++LG +RK + F+  + + Y  L    + P R+  ++R+R   + + C  F   F R  R   S  N ED  +   A +   + K        PF+F+  W++L+NH K+
Sbjct:   81 EMTSNNVRGPKPTRVNAKNYTSLEDEALVNSYLYTSEDAVLGNNRKAEAFYTKVHETYLRLKDQEHDP-RAPTALRSRFDKIDSACKRFHAVFTRTKR--KSGTNYEDWVKAAKAEYLASEKK--------PFQFEHCWKILKNHQKW 217          
BLAST of Ggra3537.t1 vs. uniprot
Match: D0N0P1 (Uncharacterized protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0N0P1_PHYIT)

HSP 1 Score: 61.2 bits (147), Expect = 2.310e-7
Identity = 40/136 (29.41%), Postives = 69/136 (50.74%), Query Frame = 0
Query:   27 RGPSFTPQEDVGIARAYIKTSEDSILGTDRKKKLFFDAITKVYNE--LYKPANRPSRSTESVRNRTKLLTTKCALFSGCFVRVIRLNPSAYNEEDKFRMPTALFNGIKMKSPKDDIGEPFKFKEAWEVLRNHPKFS 160
            +G  ++ +E + + R++++TSED I G  +KK  F+    KVY      + A    RS  +V  R K L  +   F G F ++     S +NEE   +   +++ G + K       +PF+F +AW  LR+ PK++
Sbjct:    3 KGREWSAEETIQLCRSWLETSEDPIRGAGQKKGSFY---AKVYQHWLAQRGAGADERSEAAVSGRWKKLQPEVTKFEGIFSKLKSKERSGWNEEMFVKSAVSIY-GERHK-------QPFEFLDAWNELRDKPKWT 127          
The following BLAST results are available for this feature:
BLAST of Ggra3537.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A2V3J0915.890e-3235.62Glutathione S-transferase T2 n=1 Tax=Gracilariopsi... [more]
A0A2V3IMI16.690e-3241.01Glutathione S-transferase T3 n=1 Tax=Gracilariopsi... [more]
A0A2V3IIQ93.930e-2742.22Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J4H65.660e-1936.80Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A7S4KMN43.120e-928.38Hypothetical protein (Fragment) n=1 Tax=Paramoeba ... [more]
D0N0P12.310e-729.41Uncharacterized protein n=1 Tax=Phytophthora infes... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 226..246
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 161..212
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 162..188
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..33
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 189..212
NoneNo IPR availablePANTHERPTHR45023FAMILY NOT NAMEDcoord: 20..243
IPR029466No apical meristem-associated, C-terminal domainPFAMPF14303NAM-associatedcoord: 143..248
e-value: 4.0E-9
score: 37.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000059_piloncontigtig00000059_pilon:874910..875740 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra3537.t1Ggra3537.t1Gracilaria gracilis GNS1m malemRNAtig00000059_pilon 874910..875740 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra3537.t1 ID=Ggra3537.t1|Name=Ggra3537.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=277bp
MEQLSSPNDCPDLTSCPKMEAKKHTTRGPSFTPQEDVGIARAYIKTSEDS
ILGTDRKKKLFFDAITKVYNELYKPANRPSRSTESVRNRTKLLTTKCALF
SGCFVRVIRLNPSAYNEEDKFRMPTALFNGIKMKSPKDDIGEPFKFKEAW
EVLRNHPKFSIDEEITSTSSEADPSSTSRQQTCSKPGTPDQIEKKDVPST
EFSERPQGRKAAKMEFIKQKHYEEKLNVARQALRLQRERASEIKRQNDIS
LFMMTADSSPEAQEFLKSHGSAFSTT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029466NAM-associated_C