Ggra3528.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra3528.t1
Unique NameGgra3528.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length425
Homology
BLAST of Ggra3528.t1 vs. uniprot
Match: A0A1X6P235 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P235_PORUM)

HSP 1 Score: 289 bits (739), Expect = 1.500e-90
Identity = 130/219 (59.36%), Postives = 165/219 (75.34%), Query Frame = 0
Query:  213 HGADPGAGENFWKWFQDTKESE---GSANVTCPP-DSERVCLMFYKFLKKYKIRSVYDISCARNLDWMPPIVRKVGNELWGFKYYC---NTNTED-LSRAKEKLAGLSYVEFAPEQWWRTGFTEGIQLLFAWDVLPHIAYGRIWNFFVKSKAQNIKYLLFDNYPGIMNDPSPKRQYLNIRKHPFRFPAAKEVVQNVTEPGETEKRQLLFYETDMLPDNL 423
            +G+ PG  ENFWKWFQ TK +E    S  V CPP D+ R+C  FYK+L+KYKIR+V D SC  N+ WMP ++R+VG+ELWGF+YYC       ED    AK  L+   +VEF   +WW  GF +G+ L+F WDVLPH AYGR+W+FFV ++   +KYLLFDNYPG++N+PSPKR+++N+RKHPF+FPAAKEVVQNVTEPGE  KRQLLFYETD LP++L
Sbjct:  195 NGSAPGHDENFWKWFQQTKGAEHKDASKAVRCPPGDTHRLCETFYKYLRKYKIRTVLDASCGANVAWMPAVLRQVGSELWGFRYYCMHAGAGAEDGAEAAKVALSPFPFVEFVRSEWWHGGFPDGLDLVFCWDVLPHTAYGRVWSFFVLARKHGVKYLLFDNYPGLLNNPSPKRKFINVRKHPFKFPAAKEVVQNVTEPGEHIKRQLLFYETDALPEHL 413          
BLAST of Ggra3528.t1 vs. uniprot
Match: R7QHX1 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QHX1_CHOCR)

HSP 1 Score: 246 bits (627), Expect = 2.390e-73
Identity = 119/229 (51.97%), Postives = 154/229 (67.25%), Query Frame = 0
Query:  150 ADQEGTQPSPSFHPLHKRHGHGSHSAVAPSLAKMESVAADNDDSSPKPQPSSSAHKPQASKPEHGADPGAGENFWKWFQDTKESEG---SANVTCPPDSERVCLMFYKFLKKYKIRSVYDISCARNLDWMPPIVRKVGNELWGFKYYCNT-NTEDLSRAKEKLAGLSYVEFAPEQWWRTGFTEGIQLLFAWDVLPHIAYGRIWNFFVKSKAQNIKYLLFDNYPGIMNDP 374
            AD EG    P   P  K    G+ S+  PS     +   D+D+      P++  H       E GA+PGAGENFW+WFQ+TK SE    S +++CP ++ER+C M YK+L+KYKIR+++D SCA N DWMP ++RK GNELWGFKYYC+    E L   KEK A L++VE+AP+ WWR G+ +  +LLFAWD LPHIAYGR+WNFFVK+K Q IKY+L DNYPG+ NDP
Sbjct:  218 ADDEGDPEDPDVSPK-KASSRGTESS-RPSRRDNNARKRDSDEDVDLNPPTARKHSKLG---EGGAEPGAGENFWQWFQETKGSEKGPVSGSISCPEETERLCQMTYKYLRKYKIRTIFDASCANNGDWMPEVLRKSGNELWGFKYYCSVPKDEQLDYVKEKFASLNFVEYAPDVWWRDGYPDDTELLFAWDTLPHIAYGRVWNFFVKAKKQEIKYILVDNYPGMTNDP 441          
BLAST of Ggra3528.t1 vs. uniprot
Match: A0A7S1EPQ2 (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1EPQ2_9RHOD)

HSP 1 Score: 176 bits (445), Expect = 3.790e-48
Identity = 84/216 (38.89%), Postives = 125/216 (57.87%), Query Frame = 0
Query:  222 NFWKWFQDTKESEGSAN----VTCP---PDSERVCLMFYKFLKKYKIRSVYDISCARNLDWMPPIVRKVGNELWGFKYYC---NTNTEDLSRAKEKLAGLSY-VEFAPEQWWRT---GFTEGIQLLFAWDVLPHIAYGRIWNFFVKSKAQNIKYLLFDNYPGIMNDPSPKRQYLNIRKHPFRFPAAKEVVQNVTEPGETE---KRQLLFYETDMLP 420
            +F  WF+   E E +A     + CP   PD   +C   ++ L+KYK+R V D++C +   W P ++ K+  E WGFKY C   +    D  +A ++L  +   V +    WW+    G     +  FAWD L H +YGR+W+FF  S++   KY LFDNYP + NDPSPKR+++N+R+HPF+F AAK+ +QNVT+  E     KRQL+ Y  + +P
Sbjct:   90 DFLNWFKSQSEREQNATERGKIECPEKHPDGI-LCKTLFRLLRKYKVRIVVDVACHKTASWTPLVIEKLAAEYWGFKYICVLPDKEEMDKLKASKQLERVEQNVNYIEGMWWKPLDFGGQLNAEFYFAWDTLCHTSYGRVWSFFSSSQSSGAKYYLFDNYPALSNDPSPKREFINVRRHPFKFGAAKDTIQNVTDVDENPDDVKRQLVMYTAETIP 304          
BLAST of Ggra3528.t1 vs. uniprot
Match: A0A5J4Z4G3 (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z4G3_PORPP)

HSP 1 Score: 136 bits (342), Expect = 1.870e-32
Identity = 67/207 (32.37%), Postives = 107/207 (51.69%), Query Frame = 0
Query:  225 KWFQDTKESEGSANVTCPPD-SERVCLMFYKFLKKYKIRSVYDISCARNLDWMPPIVRKVGNELWGFKYYC-NTNTEDLSRAKEKL-----AGLSYVEFAPEQWWRTGFTEGIQLLFAWDVLPHIAYGRIWNFFVKSKAQNIKYLLFDNYPGIMNDPSPKRQYLNIRKHPFRFPAAKEVVQNVTEPGETEKRQLLFYETDMLPDNLQ 424
            K  +   E E      C  D +E++C  FY+ ++KYK+  V D+SC +   +M P++R      +  +Y C +++  +L + ++        G + V++   QWW+  F   + LL AWDVL H AYGR+W FF  +    +K +LFDNY    N  SP R+ +N+R+ PF+F     +   +T       RQL  Y  D L D+L+
Sbjct:  173 KEMEAVDEDESFERPDCKKDVNEKLCRKFYRVMRKYKVARVLDVSCIKTAMYMAPVLRLAAKHTYRLEYICASSHDSELEKVRDDADLLADVGQAEVKYMNLQWWKEPFPPQVDLLIAWDVLAHAAYGRVWRFFENALECEVKMVLFDNYVQESNSWSPSRKTINVRRAPFKFEKPTLIFNEMTSEVIESTRQLTVYSLDALRDSLK 379          
BLAST of Ggra3528.t1 vs. uniprot
Match: A0A1X6NN90 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NN90_PORUM)

HSP 1 Score: 116 bits (291), Expect = 2.070e-26
Identity = 48/78 (61.54%), Postives = 63/78 (80.77%), Query Frame = 0
Query:  327 TEGIQLLFAWDVLPHIAYGRIWNFFVKSKAQNIKYLLFDNYPGIMNDPSPKRQYLNIRKHPFRFPAAKEVVQNVTEPG 404
            T  + L+FAWDVL H  YGR+W FFV+++ + +  +LFDNYPG++N+PSPKR+YLN+RKHPF+F  A EVVQNVTE G
Sbjct:   91 TGAVGLVFAWDVLAHTPYGRVWGFFVRARQEGVGLVLFDNYPGLVNNPSPKRRYLNVRKHPFKFGPAAEVVQNVTEGG 168          
The following BLAST results are available for this feature:
BLAST of Ggra3528.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A1X6P2351.500e-9059.36Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
R7QHX12.390e-7351.97Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S1EPQ23.790e-4838.89Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A5J4Z4G31.870e-3232.37Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
A0A1X6NN902.070e-2661.54Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..22
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 131..159
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 191..207
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 77..104
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 131..227
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 40..57
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 28..39
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..57
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 58..424
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..27
NoneNo IPR availableTMHMMTMhelixcoord: 23..45

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000059_piloncontigtig00000059_pilon:761424..762777 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra3528.t1Ggra3528.t1Gracilaria gracilis GNS1m malemRNAtig00000059_pilon 761424..762777 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra3528.t1 ID=Ggra3528.t1|Name=Ggra3528.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=425bp
MTAAMYSSRARRRRTTKLRRQRSNAPRAVAAALFFFLLCYEMLVLRPPAA
VKPSLSAHSVASPPPVAAPSSLAASPPAASVSSPSSPSATTLGAGDKTPQ
TTTVNSNIVAKAAVSPPSIASRLASLQKLTSSITPPSTSQSASQSLRVAA
DQEGTQPSPSFHPLHKRHGHGSHSAVAPSLAKMESVAADNDDSSPKPQPS
SSAHKPQASKPEHGADPGAGENFWKWFQDTKESEGSANVTCPPDSERVCL
MFYKFLKKYKIRSVYDISCARNLDWMPPIVRKVGNELWGFKYYCNTNTED
LSRAKEKLAGLSYVEFAPEQWWRTGFTEGIQLLFAWDVLPHIAYGRIWNF
FVKSKAQNIKYLLFDNYPGIMNDPSPKRQYLNIRKHPFRFPAAKEVVQNV
TEPGETEKRQLLFYETDMLPDNLQ*
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