Ggra3454.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra3454.t1
Unique NameGgra3454.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length99
Homology
BLAST of Ggra3454.t1 vs. uniprot
Match: A0A2V3J1G9 (Small ubiquitin-related modifier 2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1G9_9FLOR)

HSP 1 Score: 182 bits (461), Expect = 5.940e-58
Identity = 90/98 (91.84%), Postives = 93/98 (94.90%), Query Frame = 0
Query:    1 MAEKAPEDSKASVDTKPEPGEQINIKVRDAEGNEVQFKIKKTTQLKKLMDAYCARMGTTKGAYRFLFDGHRINEEDTPETLDMQELDCVDAMVSQLGG 98
            M+EKAPEDSK  VD KPEPG+QINIKVRDAEGNEVQFKIKKTTQLKKLMDAYC RMGT KGAYRFLFDGHRINEEDTPE+LDMQELDCVDAMVSQLGG
Sbjct:    1 MSEKAPEDSKPQVDAKPEPGDQINIKVRDAEGNEVQFKIKKTTQLKKLMDAYCLRMGTAKGAYRFLFDGHRINEEDTPESLDMQELDCVDAMVSQLGG 98          
BLAST of Ggra3454.t1 vs. uniprot
Match: A0A1X6P2Q8 (Ubiquitin-like domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P2Q8_PORUM)

HSP 1 Score: 124 bits (310), Expect = 1.440e-34
Identity = 60/95 (63.16%), Postives = 76/95 (80.00%), Query Frame = 0
Query:   14 DTKPEP----------GEQINIKVRDAEGNEVQFKIKKTTQLKKLMDAYCARMGTTKGAYRFLFDGHRINEEDTPETLDMQELDCVDAMVSQLGG 98
            D+KP+P           EQ+NIKVRD+EGNEVQF+IKK TQLKKLMDAYC RMGT+ G YRFLFDG+RIN+ DTPE+L+M+++D +DA++ Q GG
Sbjct:   16 DSKPDPEGAGGDGGASSEQVNIKVRDSEGNEVQFRIKKKTQLKKLMDAYCGRMGTSVGTYRFLFDGNRINDTDTPESLEMEDMDVIDAVLFQQGG 110          
BLAST of Ggra3454.t1 vs. uniprot
Match: A0A7J7IFI8 (Small ubiquitin- modifier 1 n=2 Tax=Cyanidiaceae TaxID=265316 RepID=A0A7J7IFI8_9RHOD)

HSP 1 Score: 115 bits (289), Expect = 1.020e-31
Identity = 58/92 (63.04%), Postives = 72/92 (78.26%), Query Frame = 0
Query:    8 DSKASV-DTKPEPGEQINIKVRDAEGNEVQFKIKKTTQLKKLMDAYCARMGTTKGAYRFLFDGHRINEEDTPETLDMQELDCVDAMVSQLGG 98
            D K +V D K   G+QIN+KVRDA+GNEVQF+IKK T L+KLMDAYC R G    +YRFLFDG+RINE+DTPE L M+++D +DAM+ Q GG
Sbjct:    7 DKKPAVSDVKTSGGDQINLKVRDADGNEVQFRIKKHTPLRKLMDAYCTRKGVDLHSYRFLFDGNRINEDDTPEKLGMEDMDSIDAMLFQQGG 98          
BLAST of Ggra3454.t1 vs. uniprot
Match: A0A7S0T4E4 (Hypothetical protein n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0T4E4_9RHOD)

HSP 1 Score: 107 bits (266), Expect = 4.180e-28
Identity = 52/91 (57.14%), Postives = 65/91 (71.43%), Query Frame = 0
Query:    8 DSKASVDTKPEPGEQINIKVRDAEGNEVQFKIKKTTQLKKLMDAYCARMGTTKGAYRFLFDGHRINEEDTPETLDMQELDCVDAMVSQLGG 98
            D+K  V+      +QIN+KV+D +GNEV FKIK+TTQL+KLM AY  R+G     YRF+FDG R+  +DTPE LDM E DC+DAMV Q GG
Sbjct:    6 DAKPKVEDATANADQINLKVKDVDGNEVNFKIKRTTQLQKLMKAYSERLGANIQTYRFMFDGKRVENDDTPEKLDMDEGDCIDAMVYQQGG 96          
BLAST of Ggra3454.t1 vs. uniprot
Match: A0A5J4YMR7 (Small ubiquitin-related modifier 1 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YMR7_PORPP)

HSP 1 Score: 106 bits (265), Expect = 4.320e-28
Identity = 47/77 (61.04%), Postives = 64/77 (83.12%), Query Frame = 0
Query:   22 QINIKVRDAEGNEVQFKIKKTTQLKKLMDAYCARMGTTKGAYRFLFDGHRINEEDTPETLDMQELDCVDAMVSQLGG 98
            Q+NIKV+D++GNEVQFKIK+TT + KLM AY +R+G  +  YRF FDG+RI+  DTP++LDM+++DC+DAMV Q GG
Sbjct:   20 QLNIKVKDSDGNEVQFKIKRTTPMSKLMSAYASRLGVDENTYRFNFDGNRISPSDTPDSLDMEDMDCIDAMVYQQGG 96          
BLAST of Ggra3454.t1 vs. uniprot
Match: A0A0D1BVU7 (Ubiquitin-like domain-containing protein n=14 Tax=Ustilaginales TaxID=5267 RepID=A0A0D1BVU7_USTMA)

HSP 1 Score: 104 bits (260), Expect = 2.220e-27
Identity = 50/83 (60.24%), Postives = 64/83 (77.11%), Query Frame = 0
Query:   16 KPEPGEQINIKVRDAEGNEVQFKIKKTTQLKKLMDAYCARMGTTKGAYRFLFDGHRINEEDTPETLDMQELDCVDAMVSQLGG 98
            KPE GEQ+NIKV+DA+GNEV FK+K+TT+L KL  AY  RMG  + + RF+FDG RI + DT ETL M++ D +DAM+ QLGG
Sbjct:   10 KPEGGEQLNIKVKDADGNEVFFKVKRTTKLSKLKKAYAERMGKPENSVRFIFDGQRIGDNDTAETLGMEDQDEIDAMIEQLGG 92          
BLAST of Ggra3454.t1 vs. uniprot
Match: A0A7S2ZGT4 (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZGT4_9RHOD)

HSP 1 Score: 102 bits (255), Expect = 1.860e-26
Identity = 52/96 (54.17%), Postives = 70/96 (72.92%), Query Frame = 0
Query:    4 KAPE-DSKASVDTKPEPGEQINIKVRDAEGNEVQFKIKKTTQLKKLMDAYCARMGTTKGAYRFLFDGHRINEEDTPETLDMQELDCVDAMVSQLGG 98
            K PE ++K    T+ +P   IN++V+D  GNEVQF+IKK+TQLKKLMD YC RMG     +RF+FDG+R+ E DTPE L+M++ D +DA+V Q GG
Sbjct:   11 KEPETEAKQEAKTEADPN-LINLRVKDGGGNEVQFRIKKSTQLKKLMDVYCQRMGAQPNTFRFIFDGNRVGETDTPEKLEMEQGDVIDALVFQQGG 105          
BLAST of Ggra3454.t1 vs. uniprot
Match: A0A7S0ZD19 (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZD19_9RHOD)

HSP 1 Score: 101 bits (251), Expect = 1.030e-25
Identity = 46/78 (58.97%), Postives = 61/78 (78.21%), Query Frame = 0
Query:   21 EQINIKVRDAEGNEVQFKIKKTTQLKKLMDAYCARMGTTKGAYRFLFDGHRINEEDTPETLDMQELDCVDAMVSQLGG 98
            EQINIKV+D++GNEVQFKIK++T L KLM AY  R+G  +  +RF+FDG R+   DTP++LDM + DC+DAM+ Q GG
Sbjct:   23 EQINIKVKDSDGNEVQFKIKRSTPLSKLMQAYSQRLGAQQDTFRFMFDGKRVQTGDTPDSLDMDDGDCIDAMIYQQGG 100          
BLAST of Ggra3454.t1 vs. uniprot
Match: A0A316ZGC6 (Ubiquitin-like protein n=1 Tax=Tilletiopsis washingtonensis TaxID=58919 RepID=A0A316ZGC6_9BASI)

HSP 1 Score: 100 bits (248), Expect = 1.710e-25
Identity = 48/91 (52.75%), Postives = 68/91 (74.73%), Query Frame = 0
Query:    8 DSKASVDTKPEPGEQINIKVRDAEGNEVQFKIKKTTQLKKLMDAYCARMGTTKGAYRFLFDGHRINEEDTPETLDMQELDCVDAMVSQLGG 98
            D++A    KPE  +Q+NIKV+D +GNEV FK+KK+T+L KL  AY  RMG  +   RFL+DG R+N++DT E+L++++ D +DAMV QLGG
Sbjct:    5 DNEAPAAPKPEGADQLNIKVKDGDGNEVFFKVKKSTRLGKLRKAYAERMGKPENTVRFLYDGTRVNDDDTAESLEIEDQDEIDAMVEQLGG 95          
BLAST of Ggra3454.t1 vs. uniprot
Match: M5EPR1 (Ubiquitin-like protein of the SUMO family n=3 Tax=Malassezia TaxID=55193 RepID=M5EPR1_MALS4)

HSP 1 Score: 99.8 bits (247), Expect = 2.230e-25
Identity = 50/90 (55.56%), Postives = 67/90 (74.44%), Query Frame = 0
Query:   12 SVDTKPEPG---EQINIKVRDAEGNEVQFKIKKTTQLKKLMDAYCARMGTTKGAYRFLFDGHRINEEDTPETLDMQELDCVDAMVSQLGG 98
            S +T P+P    EQ+NIKV+DAEGNEV FK+K+TT+L KL  AY  RMG  + + RF+FDG R+ ++DT E+LDM + D +DAM+ QLGG
Sbjct:    2 SEETVPKPEVAPEQLNIKVKDAEGNEVFFKVKRTTKLAKLKRAYAERMGKPENSVRFIFDGQRVGDDDTAESLDMNDQDEIDAMIEQLGG 91          
The following BLAST results are available for this feature:
BLAST of Ggra3454.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J1G95.940e-5891.84Small ubiquitin-related modifier 2 n=1 Tax=Gracila... [more]
A0A1X6P2Q81.440e-3463.16Ubiquitin-like domain-containing protein n=1 Tax=P... [more]
A0A7J7IFI81.020e-3163.04Small ubiquitin- modifier 1 n=2 Tax=Cyanidiaceae T... [more]
A0A7S0T4E44.180e-2857.14Hypothetical protein n=1 Tax=Erythrolobus madagasc... [more]
A0A5J4YMR74.320e-2861.04Small ubiquitin-related modifier 1 n=1 Tax=Porphyr... [more]
A0A0D1BVU72.220e-2760.24Ubiquitin-like domain-containing protein n=14 Tax=... [more]
A0A7S2ZGT41.860e-2654.17Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A7S0ZD191.030e-2558.97Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A316ZGC61.710e-2552.75Ubiquitin-like protein n=1 Tax=Tilletiopsis washin... [more]
M5EPR12.230e-2555.56Ubiquitin-like protein of the SUMO family n=3 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000626Ubiquitin-like domainSMARTSM00213ubq_7coord: 23..94
e-value: 5.0E-8
score: 42.7
IPR000626Ubiquitin-like domainPROSITEPS50053UBIQUITIN_2coord: 21..98
score: 13.815701
NoneNo IPR availableGENE3D3.10.20.90coord: 1..98
e-value: 1.6E-32
score: 114.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..24
NoneNo IPR availablePANTHERPTHR10562SMALL UBIQUITIN-RELATED MODIFIERcoord: 8..98
NoneNo IPR availableCDDcd16116Ubl_Smt3_likecoord: 21..94
e-value: 1.59311E-37
score: 118.87
IPR022617Rad60/SUMO-like domainPFAMPF11976Rad60-SLDcoord: 23..93
e-value: 2.6E-21
score: 75.2
IPR029071Ubiquitin-like domain superfamilySUPERFAMILY54236Ubiquitin-likecoord: 5..98

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000059_piloncontigtig00000059_pilon:163773..164174 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra3454.t1Ggra3454.t1Gracilaria gracilis GNS1m malemRNAtig00000059_pilon 163773..164174 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra3454.t1 ID=Ggra3454.t1|Name=Ggra3454.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=99bp
MAEKAPEDSKASVDTKPEPGEQINIKVRDAEGNEVQFKIKKTTQLKKLMD
AYCARMGTTKGAYRFLFDGHRINEEDTPETLDMQELDCVDAMVSQLGG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000626Ubiquitin-like_dom
IPR022617Rad60/SUMO-like_dom
IPR029071Ubiquitin-like_domsf