Ggra345.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra345.t1
Unique NameGgra345.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length780
Homology
BLAST of Ggra345.t1 vs. uniprot
Match: Hint domain-containing protein n=1 Tax=Aliarcobacter butzleri TaxID=28197 RepID=UPI001ED9D9CC (Hint domain-containing protein n=1 Tax=Aliarcobacter butzleri TaxID=28197 RepID=UPI001ED9D9CC)

HSP 1 Score: 270 bits (690), Expect = 8.280e-76
Identity = 186/611 (30.44%), Postives = 310/611 (50.74%), Query Frame = 0
Query:   23 VKALVNSFPPLHGASITSAYQKVLAQSLRKKVPNNKVATKPPPHGHHTYVTYGSDH----YREAFTYA---ESISEGV-GMLHSLTPFFLWDSFSVALLHDEISKNVTVSLDTAALTSTVNRFWSEIVLHCAAVYTAAFKCEYDPTRSAIRRIPESQRGSVAQQLHSCIKSGHFTAKVNIGISAGGDAAQQATWFLFNLWVSLDVLGYPRVDDAIQQYQSQGLKVPYNVQAGNWNSGSYHSWFQRSLGNHMYHRFMTRVMRELCYNC-------DKYNEHIPDGYSLSTCYWGPLARYTLPSQSCFGESTKVLMADGSAKCIKNVRKNDLVHTTKGKRRVLMVESPALGDRQMWNVNGLELSVTAGHCFRTANAGAAKRVAINEIVTMDSAPTMSIDGGVGKCQQGSQLRSVCVKNGTLTESTLFVTDVRPIMKKTRRSEKQEDAVRVFDILVEKWWDDDASYFVGGPKNFVAVDAETSNALTDPSTSAAILAAMDVALKATRASNNPPLKTLSRLGANIDLQDIKRGAMAMVYSKRVQKTYKRLRIPKATLFESEDGKWSECASFLEYLLISKYGRWIRSVVRTDFESGVEEALPDDVLVFAVHDIELSG 618
            ++ L+NS P    +      +  L   L  K+PN+++  +P  +G    ++Y  +     Y++AF       SIS  +   + ++     W  +SVALL D + K+++++LD+ AL S ++ + +EI    A  Y   F   Y PT+++   I    + +   +L + I +G FTA VN  +S  GD+A  ATWFLFNLW++L  LG   V+ AI +Y++ GL +P  V + NW  G+Y SWF    G+++    +T  M +  Y            +E+I +GYS S   WG L+ Y   S SCFG++T +LMAD + K I  ++  D ++T +G +++++VESP   +R+++ +N L++ VT  H F++      K +AIN  V  D+  T   D GV   + GS L           +  + V  +  I+K+ ++ EK      V+D+++E    ++  YFVG    FV V  E++N L+ P  S AI+ +M++       SN         L    +L  +K  +  +  +  V    K   IP    F  EDG W E +S LE+ +IS Y + +R  + T ++  +E+    +VL   ++DIEL G
Sbjct:   38 LQNLINSLPYYQESVSQEVLKNSLVNILENKLPNDRIGAQPSDYGFGYNISYSYNGNYSGYKDAFFNGISLNSISTNILNQIGNIVDDKFWSGYSVALLTDSVRKHISINLDSNALQSALSSYSTEISKILAPSYLGIFTNGYIPTQNSFNSI--QNKNTALNELDNAIANGQFTANVNQALSIPGDSASAATWFLFNLWITLKALGMQDVNSAITKYKNNGLNIPIQVDSNNWWQGNYSSWFAPLDGSYINSSTITNSMPQESYTYVSGSMYPSHSSENIQNGYSQSLVNWGSLSYYKAQSSSCFGQNTNILMADFTMKKICEIKIGDFIYTREGAKKIILVESPLRNNRELYQINDLDIYVTYAHPFKSDE----KVLAINPWVLKDTITTFG-DKGVDYLKIGSILEG--------KDQKIEVNKIE-IIKEEQKDEK------VYDLIIEDAIKNNFGYFVGSNNTFVEVFPESANPLSYPFVSTAIIGSMNIIKDTCNISN---------LKFENNLSSLKLESKELTSNLSV----KLATIPGIDFFIKEDGSWDEYSSNLEHNMISFYSKDLRRKIETGWK--IEKDTSGNVLCIGINDIELIG 611          
BLAST of Ggra345.t1 vs. uniprot
Match: A0A1H4FQJ5 (Uncharacterized protein n=2 Tax=Chitinophaga terrae (ex Kim and Jung 2007) TaxID=408074 RepID=A0A1H4FQJ5_9BACT)

HSP 1 Score: 228 bits (582), Expect = 7.060e-61
Identity = 195/638 (30.56%), Postives = 295/638 (46.24%), Query Frame = 0
Query:   26 LVNSFPPLHGASITSAYQKVLAQSLRKKVPNNKVATKP--PPHGHHTYVTYGSDH--YREAFTYAESISEG----VGMLHSLTPFF---LWDSFSVALLHDEISKN-VTVSLDTAALTSTVNRFWSEIVLHCAAVYTAAFKCEYDPTRSAIRRIPESQRGSVAQQLH-SCIKSGHFTAKVNIGISAGGDAAQQATWFLFNLWVSL-DVLGYPRVDDAIQQYQSQGLKVPYNVQAGNWNSGSYHSWFQRSLGNHMYHRFMTRV-----MRELCYNC------DKYNEHIPDGYSLSTCYWGPLARYTLPSQSCFGESTKVLMADGSAKCIKNVRKNDLVHTTKGKRRVLMVESPALGDRQMWNVNGLELSVTAGHCFRTANAGAAKRVAINEIVTMDSAPTMSIDGGVGKCQQGSQLRSVCVKNGTLTESTLFVTDVRPIMKKTRRSEKQEDAVRVFDILVEKWWDDDASYFVGGPKNFVAVDAETSNALTDPSTSAAILAAMDVALKATRASNNPPLKTLSRLGANIDLQDIKRGAMAMVYSKRVQKTYKRLRIPKATLFESEDGKWSECASFLEYLLISKYGRWIRSVVRTDFESGVEEA---LPDDVLVFAVHDIELSGDHGLPAGSTLRIAMELS 635
            LV + P    + +  A    LA  L   + NNK+  +P  P  G      Y   +  Y++AF     +S+       M++++   F    W +F+V +L D I K+ V + LD + LT  ++   S      AA Y A ++  Y PT +A   +      + A  L    I    F   +N+ I+ GGD     TWFLFN+W++   +L    V+  I Q  ++G++VPY VQ  NW +G Y +WF    G  +       +      +E  Y C             P+GY  S C WG L  Y   S SCFG+ T VLMADGSA  I  +   D V T  G R+V++VE+PA   R ++ VN   L  T  H FR    G+    +I    T    PT+ I GG+GK  +G QL +             + +DV      +  + K+E+ V  +D+++E W  D  +++VGGP  +    +ETS+   D  T+A ILAAM+VA+ A+R     P   L  +  ++ L+ +   A+  V +    K  +RL IP    +   DGKW   AS +E +L+ + G      +R +   G   A        L   +HDI ++G+H LPA     IA+ LS
Sbjct:   36 LVEALPAYSNSGVMEAMYATLANILGACLHNNKIIQQPSEPSAGCTAAYEYSGPYNGYQDAFFNGVVLSKAGRTAFDMVYAVNNDFNTNWWGNFAVPVLTDAILKSGVGIVLDESKLTDDLSNINSSYFQALAATYLAVYQTAYSPTANAWTNLMNGCNPNDAWNLLLDIITDPGFITNINVSITKGGDNGTATTWFLFNIWITFRSLLAAGDVNGVISQCMNKGMQVPYVVQPYNWWNGRYTTWFGMITGTVLQPSAAEIISAGFPQKETVY-CFMGPITGSIYVSEPNGYCKSLCLWGSLNWYKPSSGSCFGKDTMVLMADGSAGPISGIVIGDQVQTNLGPRKVVLVETPARNGRPLYQVNDQALFATDAHPFR--GTGSPAHYSIAPWSTAHYVPTL-IAGGIGKLTRGVQLSA-------------YQSDVAVASVTSHEAGKKEELV--YDLILENWEKDQLTWYVGGPDTYFCTVSETSDPRYDIRTTAGILAAMNVAVDASRNFVQAPATQLPAIVYSMPLEALHHRALRRVKTSG-GKGLRRLPIPGPEYY-LRDGKWDPHASIMEQVLVQRLGL----ALRRESAGGWRPAGYHPHGKRLALMLHDIIVAGEHPLPAEQP--IALHLS 646          
BLAST of Ggra345.t1 vs. uniprot
Match: A0A7Y4YZI6 (Uncharacterized protein n=1 Tax=Bacteroidales bacterium TaxID=2030927 RepID=A0A7Y4YZI6_9BACT)

HSP 1 Score: 135 bits (341), Expect = 2.810e-31
Identity = 94/310 (30.32%), Postives = 147/310 (47.42%), Query Frame = 0
Query:   20 LDRVKALVNSFPPLHGASITSAYQKVLAQSLRKKVPNNKVATKPPPHGHHTYVTYGSD----HYREAFTYAESISEGVGMLHSLTPFF----------LWDSFSVALLHDEI--SKNVTVSLDTAALTSTVNRFWSEIVLHCAAVYTAAFKCEYDPTRSAIRRI-PESQRGSVAQQLHSCIKSGHFTAKVNIGISAGGDAAQQATWFLFNLWVSLDVLGYPRVDDAIQQYQSQGLKVPYNVQAGNWNSGSYHSWFQRSLGNHMYHRFMTRVMRELCYNC-------DKYNEHIPDGYSLSTCYWGPLARY 305
            ++ + AL++S P        +A++  L       +P+  VA   P  G     TY        YR+ F  + S+   + M  SL  +F           W+ ++VALL D I  +  V V ++ + +T+ ++ + + ++   +A +   F+  Y PT +A+  I   +   +    L+  I  G FTA +N  +S GGD+A  ATWFLFNLW++L  LGY  V+ AI  Y S GL VP  V    W +GSY SW+    G+ +    +T  M      C       D  +  IP+GYS+S C  G L+ Y
Sbjct:   36 INELVALIDSLPYYGNPDWKTAHRAPLVNFFEYYLPDKSVAAPSPDKGFGYVTTYQYQGKYKKYRDVFYGSISL---ISMALSLKQWFGTTNPQFVTENWNKYAVALLTDAIRNTPKVDVDINNSKVTTDLSNYNNLLMPSLSASFLVVFESGYSPTSNALNAIIAANDLAAACTALNKAILEGEFTANINQALSIGGDSATAATWFLFNLWITLTALGYSDVNAAINSYMSAGLNVPLEVSPTKWWTGSYRSWYASLSGSDIKANNITAGMPVESVTCYMMSPWPDSSSYDIPNGYSISFCEDGDLSYY 342          
BLAST of Ggra345.t1 vs. uniprot
Match: A0A4P7D9L9 (Uncharacterized protein n=1 Tax=Paraburkholderia sp. 7MH5 TaxID=2547399 RepID=A0A4P7D9L9_9BURK)

HSP 1 Score: 102 bits (253), Expect = 6.340e-20
Identity = 87/312 (27.88%), Postives = 126/312 (40.38%), Query Frame = 0
Query:   26 LVNSFPPLHGASITSAYQKVLAQSLRKKVPNNKVATKPPPH---GHHTYVTYGS-DHYREAFTYAESISEGVGMLHSLT---------PFFLWDSFSVALLHDEISKNVTVSLDTAALTSTVNRFWSEIVLHCAAVYTAAFKCEYDPTRSAIRRIPES-QRGSVAQQLHSCIKSGHFTAKVNIGISAGGDAAQQATWFLFNLWVSLDVLGYPRVDDAIQQYQSQGLKVPYNV-----QAGNWNSGSYHSWF----------QRSLGNH--MYHRFMTRVMRELCYNCDKYNEHIPDGYSLSTCYWGPLARYT 306
            L++S P          ++  +A  L  ++PN  +  +P      G   Y   GS   Y+ AF    ++S     L S               W +F+VA+L D +      S+D   L + +N + S  +   +A Y +AF+  Y PT SA+  +  S Q  +    L + +  G F   VN  ++AGGD A  A WFLFNLW+    LG   +D  I +    GL VP  V      +  W  G Y  WF          Q S   H  M   F               +    +GY+LS C WGPL  Y+
Sbjct:    5 LIDSIPAYRSPDFLQLHRNAIANLLEIRLPNVPIEPQPGKDFGVGRMGYNYTGSCSGYQNAFFGDVALSPAASDLESAVRNPPGVAGVSAGWWGNFAVAVLTDAVRLAGIGSIDAGKLANDLNNYNSAFLPLLSASYLSAFRTAYTPTLSALASLVNSGQAAAACAMLANALNDGRFVNAVNTSMTAGGDGALSAEWFLFNLWIIFAGLGENDIDGKIAEAVHAGLDVPGEVGPRTDHSPGWWCGGYTGWFAPVTGSDLGPQASQAIHATMPQEFWAGGXXXXXXXXXHADCPTNNGYALSLCNWGPLNFYS 316          
The following BLAST results are available for this feature:
BLAST of Ggra345.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
Hint domain-containing protein n=1 Tax=Aliarcobacter butzleri TaxID=28197 RepID=UPI001ED9D9CC8.280e-7630.44Hint domain-containing protein n=1 Tax=Aliarcobact... [more]
A0A1H4FQJ57.060e-6130.56Uncharacterized protein n=2 Tax=Chitinophaga terra... [more]
A0A7Y4YZI62.810e-3130.32Uncharacterized protein n=1 Tax=Bacteroidales bact... [more]
A0A4P7D9L96.340e-2027.88Uncharacterized protein n=1 Tax=Paraburkholderia s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.170.16.10Hedgehog/Intein (Hint) domaincoord: 302..375
e-value: 1.3E-9
score: 40.3
NoneNo IPR availableCDDcd00081Hintcoord: 312..392
e-value: 1.49584E-5
score: 43.4118
IPR006141Intein N-terminal splicing regionPROSITEPS50817INTEIN_N_TERcoord: 312..378
score: 9.869535
IPR036844Hint domain superfamilySUPERFAMILY51294Hedgehog/intein (Hint) domaincoord: 311..381

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000950_piloncontigtig00000950_pilon:41694..44033 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra345.t1Ggra345.t1Gracilaria gracilis GNS1m malemRNAtig00000950_pilon 41694..44033 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra345.t1 ID=Ggra345.t1|Name=Ggra345.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=780bp
MAPRSNCHRYHEPGEPCSNLDRVKALVNSFPPLHGASITSAYQKVLAQSL
RKKVPNNKVATKPPPHGHHTYVTYGSDHYREAFTYAESISEGVGMLHSLT
PFFLWDSFSVALLHDEISKNVTVSLDTAALTSTVNRFWSEIVLHCAAVYT
AAFKCEYDPTRSAIRRIPESQRGSVAQQLHSCIKSGHFTAKVNIGISAGG
DAAQQATWFLFNLWVSLDVLGYPRVDDAIQQYQSQGLKVPYNVQAGNWNS
GSYHSWFQRSLGNHMYHRFMTRVMRELCYNCDKYNEHIPDGYSLSTCYWG
PLARYTLPSQSCFGESTKVLMADGSAKCIKNVRKNDLVHTTKGKRRVLMV
ESPALGDRQMWNVNGLELSVTAGHCFRTANAGAAKRVAINEIVTMDSAPT
MSIDGGVGKCQQGSQLRSVCVKNGTLTESTLFVTDVRPIMKKTRRSEKQE
DAVRVFDILVEKWWDDDASYFVGGPKNFVAVDAETSNALTDPSTSAAILA
AMDVALKATRASNNPPLKTLSRLGANIDLQDIKRGAMAMVYSKRVQKTYK
RLRIPKATLFESEDGKWSECASFLEYLLISKYGRWIRSVVRTDFESGVEE
ALPDDVLVFAVHDIELSGDHGLPAGSTLRIAMELSNGEEKESRTVCFTND
TSSNQYMLAVHGDCAFESADKFKCSAIYATCSIDISESTLAAFFNCSVIL
KKRPEHFLETFLMCATNGVIGRVSLSYRRMRKGFAKARTADQSTMLLKGV
ALGRQLGHKFAAAIEETSEGFDFGNWLGD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006141Intein_N
IPR036844Hint_dom_sf