Ggra3416.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra3416.t1
Unique NameGgra3416.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length342
Homology
BLAST of Ggra3416.t1 vs. uniprot
Match: A0A2V3IRU4 (DUF1664 domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRU4_9FLOR)

HSP 1 Score: 383 bits (984), Expect = 3.120e-130
Identity = 205/317 (64.67%), Postives = 246/317 (77.60%), Query Frame = 0
Query:    1 MAALGVRSIALLFGAGFSGSYVYTHLDKARSIVARILREVEEGSNAGTQSHSKGSVGDASTSVDSSPQLEELSRXXXXXXXEVSRSRSDQWLIMPPSYKGSIATITDIFNLIGWGVAAISIGGIVYYVAYRKKFKLTDLAWVSQSTFTGTVEAMQKGITRVSGAVGAVKREITQRLREVEVHVNRVQVVLGDQIDRDVGAVKEGVAEVGDEVAGVKCALGDVNQRIDQLDNKIDFATNGIVALVKALSSVAPDRIKPGSPFYDLKRFAEISDSNTANSGVLRHRLSAGGLRGLLTGEDGGDKEIAGKRRSMDLKNSI 317
            MAA+GVR++A+LFGAGFSGSYVY H+DKAR + ARILR+VE    A   + +  +    S S +S+ QL+ LSR       EV+RSRSD  LIMP SYKGS+ATITDIFNL+GW VAA+S+GG+VYYVAYRKKFKLTDLAWVSQSTF GTV+AMQKGITRVSGA+GAVKR+IT+R R++EVHV+RVQ  LG QI++DVGAVK+GVAE                           +ATNGIVALVKALSSVAPDRIKPGSPFYDLK+FA++SD+N ANSG+LRHRLS GGLRGLL GE G +K++A KR S+D+KN+I
Sbjct:    1 MAAIGVRTLAVLFGAGFSGSYVYNHMDKARVVAARILRQVEH-EVASDANATSAATAPPSASAESA-QLDTLSRQLASLSQEVNRSRSDHLLIMP-SYKGSLATITDIFNLVGWAVAAVSVGGVVYYVAYRKKFKLTDLAWVSQSTFQGTVDAMQKGITRVSGALGAVKRDITRRFRQMEVHVDRVQTTLGKQIEQDVGAVKDGVAEXXXXXXXXXXXXXXXXXXXXXXXXXXXYATNGIVALVKALSSVAPDRIKPGSPFYDLKKFADLSDTNPANSGMLRHRLSTGGLRGLLVGEGGTEKDVANKRNSLDMKNAI 314          
BLAST of Ggra3416.t1 vs. uniprot
Match: R7Q5A4 (DUF1664 domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q5A4_CHOCR)

HSP 1 Score: 233 bits (594), Expect = 4.570e-71
Identity = 133/290 (45.86%), Postives = 198/290 (68.28%), Query Frame = 0
Query:   11 LLFGAGFSGSYVYTHLDKARSIVARILREVEEGSNAGTQSHSKGSVGDASTSVDS-SPQLEELSRXXXXXXXEVSRSRSDQWLIMPPS--YKGSIATITDIFNLIGWGVAAISIGGIVYYVAYRKKFKLTDLAWVSQSTFTGTVEAMQKGITRVSGAVGAVKREITQRLREVEVHVNRVQVVLGDQIDRDVGAVKEGVAEVGDEVAGVKCALGDVNQRIDQLDNKIDFATNGIVALVKALSSVAPDRIKPGSPFYDLKRFAEISD-SNTANSGVLRHRLSAGGLRGLLTG 296
            +LFGA + G+Y+Y ++D ARS+ AR+L + +   N  T + S+ +  ++++++D+ S Q++ L+R       E+SR+R    +++ PS   KGS+ATI+DI NL+GW V A+S+GG+ YYVA ++   L DLAWVSQ TF GTV AMQKGI+ VSGAV AV+RE+ ++LR +E HV+ +   L  +I+ ++G VK  V  V  EV  VK  + D   R +QLD K+D AT+GI+ALVK +S++AP+R++PG+PF++LKRF   +     A S V+R RLS  GL GLL+G
Sbjct:    1 MLFGASYGGTYLYNNMDHARSVAARLLLQHQTEENKNTSAGSESAASNSTSNIDALSAQMDVLAR-------EMSRTRDHPVVLVGPSGPLKGSLATISDILNLLGWAVVAVSVGGVAYYVAVKRNVSLRDLAWVSQRTFAGTVGAMQKGISTVSGAVRAVRRELDEKLRMMEGHVDEMHDSLSGKIEDEIGGVKVDVNGVHKEVVCVKDRMDDFRIRFEQLDGKMDMATSGIMALVKVVSTLAPERLQPGTPFFELKRFMNSNPHEKIAGSSVVR-RLSNRGL-GLLSG 281          
BLAST of Ggra3416.t1 vs. uniprot
Match: M2Y6S3 (DUF1664 domain-containing protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y6S3_GALSU)

HSP 1 Score: 95.9 bits (237), Expect = 1.190e-18
Identity = 71/251 (28.29%), Postives = 124/251 (49.40%), Query Frame = 0
Query:    7 RSIALLFGAGFSGSYVYTHLDKARSIVARILR----EVEEGSNAGTQSHSKGSVGDASTSVDSSPQLEELSRXXXXXXXEVSRSRSDQWLI-MPPSYKGSIATITDIFNLIGWGVAAISIGGIVYYVAYRKK----FKLTDLAWVSQSTFTGTVEAMQKGITRVSGAVGAVKREITQRLREVEVHVNRVQVVLGDQIDRDVGAVKEGVAEVGDEVAGVKCALGDVNQRIDQLDNKIDFATNGIVALVKALS 248
            R + L+ GAG SG+ +Y H+D   S    + R     + + + A T S  +G+  +  +  +   Q+  LSR        V  S S Q L+    +  G + +   +F L        S+ G V  VA   K    F++ DLA+VS   F    E ++  +TRVSGA+  V++E++ ++++VE  V    + L  ++  ++   +  +  VG +VA V+  +G+V Q++++L NK+ FA  GI  L   +S
Sbjct:   10 RLLVLMIGAGISGATLYNHMDGVTSFFKEVSRAAIHSLTKPTKASTSSSGQGNSEELQSLAE---QITRLSREVSKSLAAVQESSSRQPLVTFVGNGPGRLGSSGFVFTL--------SVCGSVVVVAIVAKRFFGFQIWDLAYVSSRRFNQAFETLKGAVTRVSGALSQVQKELSVKIKQVEDKVVESNICLEQKLQDEMEETRRDIYTVGGDVAEVRSIVGNVEQQLEELQNKLRFANRGIYLLCTVVS 249          
BLAST of Ggra3416.t1 vs. uniprot
Match: A0A0D9WDI2 (DUF1664 domain-containing protein n=1 Tax=Leersia perrieri TaxID=77586 RepID=A0A0D9WDI2_9ORYZ)

HSP 1 Score: 68.6 bits (166), Expect = 1.710e-9
Identity = 71/273 (26.01%), Postives = 126/273 (46.15%), Query Frame = 0
Query:    2 AALGVRSIALLFGAGFSGSYVYTHLDKARSIVARILREVEEGSNAGTQSHSKGSVGDASTSVDSSPQLEELSRXXXXXXXEVSRSRSDQWLIMPPSYKGSIATITDIFNLIGWG---VAAISIGGIVYYVAYRKKFKLTDLAWVSQSTFTGTVEAMQKGITRVSGAVGAVKREITQRLREVEVHVNRVQVVLGDQIDRDVGAVKEGVAEVGDEVAGVKCALGDVNQRIDQLDNKIDFATNGIVALVKALSSVA---PDRIKPGSPFYDLKRFA 268
            A +G+  IA+L GAG +GS V   L   R  ++ IL E++E  + G     KG  G+A          + L+R       EV +  S          +GSI  +    N  G     V A ++G + Y   + K     DL +V++      V  M K + +V  ++ A KR +TQR+ +++  +++ Q  L  QI  DV   +  +  +G E+  +K  +  +++++D ++ K +F+  G++ L + +       P+R+    P    KRFA
Sbjct:    6 AGMGLTRIAILIGAGVTGSVV---LRNGR--LSEILGELQEILDKGE----KGKDGEAG----GGDMTDALTRQVRNLAMEVKQLASS---------RGSITVLNAGSNQAGVSGLIVPAATVGVLGYGYMWWKGTSFADLMYVTKRNMANAVSGMTKHLEQVQISLAAAKRHLTQRISKLDDKLDQ-QKALSGQIRDDVSDARLKLENIGSEIKNIKQLVWGLDEKMDSMEAKQNFSCAGVMYLCQYIEENGGKLPERLD--GPKIAGKRFA 253          
BLAST of Ggra3416.t1 vs. uniprot
Match: A0A3L6QP29 (DUF1664 domain-containing protein n=1 Tax=Panicum miliaceum TaxID=4540 RepID=A0A3L6QP29_PANMI)

HSP 1 Score: 61.6 bits (148), Expect = 5.540e-7
Identity = 33/119 (27.73%), Postives = 67/119 (56.30%), Query Frame = 0
Query:  132 KKFKLTDLAWVSQSTFTGTVEAMQKGITRVSGAVGAVKREITQRLREVEVHVNRVQVVLGDQIDRDVGAVKEGVAEVGDEVAGVKCALGDVNQRIDQLDNKIDFATNGIVALVKALSSV 250
            K   L+D+ +V++      V++M K + +VS A+ A KR++TQRL  ++  ++  QV +   I  +V  VK+ ++++G ++  ++  +  +  +I+ L+NK D A  GI  L +    +
Sbjct:  152 KGLSLSDVMFVTKRNMANAVQSMSKQLEQVSSALAATKRQLTQRLENLDGKMDE-QVEVSKTIRNEVNDVKDDLSQIGFDIEAIQQMVAGLEGKIELLENKQDVANTGIWYLCQVAGGI 269          
BLAST of Ggra3416.t1 vs. uniprot
Match: uncharacterized protein LOC108195051 n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=UPI0007F0267B (uncharacterized protein LOC108195051 n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=UPI0007F0267B)

HSP 1 Score: 61.2 bits (147), Expect = 5.650e-7
Identity = 57/251 (22.71%), Postives = 120/251 (47.81%), Query Frame = 0
Query:    2 AALGVRSIALLFGAGFSGSYVYTHLDKAR---SIVARILREVEEGSNAGTQSHSKGSVGDASTSVDSSPQLEELSRXXXXXXXEVSRSRSDQWL-IMPPSYKGSIATITDIFNLIGWGVAAISIGGIVYYVAYRKKFKLTDLAWVSQSTFTGTVEAMQKGITRVSGAVGAVKREITQRLREVEVHVNRVQVVLGDQIDRDVGAVKEGVAEVGDEVAGVKCALGDVNQRIDQLDNKIDFATNGIVALVKALS 248
            A +GV  + LL GAG+ G+ +  +   +     I + + R+ + G N           G++  S   + Q++ L+        EV +  S + + ++  S  G++  +          V A  +G + Y   + K    +DL +V++ + +  V  + K +  VS A+ A K+ +TQR+  ++  ++  Q+ +   I  +V  V+  ++++G ++  ++  +  +N +I  L+ K DFA NGI+ LV  ++
Sbjct:    5 AGIGVSRLILLVGAGYGGTVLLQNRKLSEIIGDIQSFVARQEKNGEN-----------GESDISDAIATQVKRLAM-------EVKQLASARQITVLNGSSGGNVTALI---------VPAALLGTVGYGYMWWKGVSFSDLMYVTKKSMSTAVSNLTKHLEHVSDALAATKKHLTQRIENLDGKLDD-QIEVSKLIKTEVTDVRAELSDIGYDLNTIQSLVHGLNGKIMTLEEKQDFANNGILYLVDCVN 227          
The following BLAST results are available for this feature:
BLAST of Ggra3416.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A2V3IRU43.120e-13064.67DUF1664 domain-containing protein n=1 Tax=Gracilar... [more]
R7Q5A44.570e-7145.86DUF1664 domain-containing protein n=1 Tax=Chondrus... [more]
M2Y6S31.190e-1828.29DUF1664 domain-containing protein n=1 Tax=Galdieri... [more]
A0A0D9WDI21.710e-926.01DUF1664 domain-containing protein n=1 Tax=Leersia ... [more]
A0A3L6QP295.540e-727.73DUF1664 domain-containing protein n=1 Tax=Panicum ... [more]
uncharacterized protein LOC108195051 n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=UPI0007F0267B5.650e-722.71uncharacterized protein LOC108195051 n=1 Tax=Daucu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 69..89
NoneNo IPR availablePANTHERPTHR46667OS05G0182700 PROTEINcoord: 3..249
NoneNo IPR availablePANTHERPTHR46667:SF6OS05G0182700 PROTEINcoord: 3..249
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..13
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 111..129
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 130..341
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..110
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availableTMHMMTMhelixcoord: 108..130
NoneNo IPR availableTMHMMTMhelixcoord: 4..26
IPR012458Domain of unknown function DUF1664PFAMPF07889DUF1664coord: 116..232
e-value: 1.8E-14
score: 53.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000905_piloncontigtig00000905_pilon:267316..268414 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra3416.t1Ggra3416.t1Gracilaria gracilis GNS1m malemRNAtig00000905_pilon 267316..268414 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra3416.t1 ID=Ggra3416.t1|Name=Ggra3416.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=342bp
MAALGVRSIALLFGAGFSGSYVYTHLDKARSIVARILREVEEGSNAGTQS
HSKGSVGDASTSVDSSPQLEELSRQLSSLSREVSRSRSDQWLIMPPSYKG
SIATITDIFNLIGWGVAAISIGGIVYYVAYRKKFKLTDLAWVSQSTFTGT
VEAMQKGITRVSGAVGAVKREITQRLREVEVHVNRVQVVLGDQIDRDVGA
VKEGVAEVGDEVAGVKCALGDVNQRIDQLDNKIDFATNGIVALVKALSSV
APDRIKPGSPFYDLKRFAEISDSNTANSGVLRHRLSAGGLRGLLTGEDGG
DKEIAGKRRSMDLKNSISPLLMFGPEVFFVKVAQCSRSRYY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012458DUF1664