Ggra3414.t1 (polypeptide) Gracilaria gracilis GNS1m male
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Overview
Homology
BLAST of Ggra3414.t1 vs. uniprot
Match: A0A2V3IUN0 (Histone RNA hairpin-binding protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUN0_9FLOR) HSP 1 Score: 249 bits (637), Expect = 9.190e-81 Identity = 130/222 (58.56%), Postives = 158/222 (71.17%), Query Frame = 0
Query: 1 MVTAPNSRKSQAPRSGFDQNNQRPLKRHRRWCDTVERFALANGIETDSHRLSQRQKQIDYGKNTLAYDRFIAACPREQRKKGDPMTPLIRQKCSKRSFMGQVTSWKKKVYAYVAELDKDVGQGNPPEIDDEFKLDGGAGARKVSETATCNTPSEGKCYATSTERSTDAVTDDGDVDLSDLDDIELDDQGNVISRNEGATPPESTAQDVDENDVEAPSIFTPY 222
M + R S RS NQRP KR RRWCD VE ALANG+ETD HR+ QRQKQI+YGKNT+AYDRFIA CPRE+RK+GDPMTPL RQKCSKRSF+GQVTSWKKKVY+YVAE+DK+ + ++DD FKLDGG+G R SE A + + S+ ST+ VTD+GD+D SDLDDIELDD GNVIS+ + A P + ++ ++ND IF PY
Sbjct: 1 MASTQECRGSGLRRSAPAHPNQRPSKRLRRWCDFVEWCALANGLETDKHRIEQRQKQINYGKNTIAYDRFIAVCPREKRKRGDPMTPLARQKCSKRSFLGQVTSWKKKVYSYVAEMDKESDEEKVLDVDDGFKLDGGSGKRSGSEKACSEQSTAERDCVPSSGHSTEDVTDEGDIDFSDLDDIELDDHGNVISKEDDAAPA-ADKEETEDNDDSPALIFKPY 221
BLAST of Ggra3414.t1 vs. uniprot
Match: A0A5J4YHX5 (Histone RNA hairpin-binding protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YHX5_PORPP) HSP 1 Score: 104 bits (260), Expect = 1.590e-23 Identity = 72/177 (40.68%), Postives = 94/177 (53.11%), Query Frame = 0
Query: 18 DQNNQRPLKRHRR-WCDTVERFALANGIETDSHRLSQRQKQIDYGKNTLAYDRFIAACPREQRKKGDPMTPLIRQKCSKRSFMGQVTSWKKKVYAYVAELDKDVGQGNPPEIDDEFKLDGGAGARKVSETAT-CNTPSEGKCYATSTERSTDAVTDDGDVDLSDLDDIELDDQGNVI 192
+ + QRP R + W D V + AL NG ETD HRL QRQKQIDYGKNT AYD + A R +R +GDPMTP RQ CSKRS+ QV W+ ++A+ +PP + A ++ +T C+T + A + DG D D+DDI+LDD GN I
Sbjct: 123 ENDAQRPGGRFKMCWADFVTKRALENGEETDPHRLRQRQKQIDYGKNTRAYDEYCARKQRSERVQGDPMTPEKRQVCSKRSWAEQVKLWRVALHAF-----------DPPPAAEHCVQ-----AHELEQTLLRCSTSDQDARAAAGAQL-------DGS-DSDDMDDIQLDDDGNPI 275
BLAST of Ggra3414.t1 vs. uniprot
Match: A0A1Y1HST1 (SLBP_RNA_bind domain-containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HST1_KLENI) HSP 1 Score: 96.3 bits (238), Expect = 3.390e-20 Identity = 50/113 (44.25%), Postives = 69/113 (61.06%), Query Frame = 0
Query: 45 ETDSHRLSQRQKQIDYGKNTLAYDRFIAACPREQRKKGDPMTPLIRQKCSKRSFMGQVTSWKKKVYAYVAELDKDVGQGNPPEIDDEFKLDG---GAGARKVSETATCNTPSE 154
ETD+HRL+QRQKQID+GKNTL Y+R++ P+ +R+KGDP TP I Q CSKRS+ GQ+ W++ ++ Y +D + E +E + G AG K ET P E
Sbjct: 163 ETDAHRLAQRQKQIDFGKNTLGYERYLEVTPKAKRQKGDPTTPRIHQVCSKRSWDGQIKKWRRFLHRYDPPVDDEA------EFAEEEYVPGYRDNAGGVKEDETGAEGAPEE 269
BLAST of Ggra3414.t1 vs. uniprot
Match: A0A7S1TE51 (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TE51_9RHOD) HSP 1 Score: 90.5 bits (223), Expect = 4.580e-19 Identity = 46/107 (42.99%), Postives = 60/107 (56.07%), Query Frame = 0
Query: 31 WCDTVERFALANGIETDSHRLSQRQKQIDYGKNTLAYDRFIAACPREQRKKGDPMTPLIRQKCSKRSFMGQVTSWKKKVYAYVAELDK--------DVGQGNPPEID 129
W + R AL NG E D HRL QR +QID+GKNTL Y R+ P E R + DP TP QKCSKRS+ GQV W+ +++ + D+ D +G EI+
Sbjct: 25 WMMRLNRLALKNGREEDRHRLKQRTRQIDFGKNTLGYQRYRERVPLEARTREDPWTPRKEQKCSKRSWDGQVRKWRNQLHVFDPVEDRGDEEDGVGDTMEGGESEIE 131
BLAST of Ggra3414.t1 vs. uniprot
Match: A8J2B6 (Histone gene transcript 5' hairpin-binding protein (Fragment) n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A8J2B6_CHLRE) HSP 1 Score: 89.0 bits (219), Expect = 1.460e-18 Identity = 38/79 (48.10%), Postives = 56/79 (70.89%), Query Frame = 0
Query: 45 ETDSHRLSQRQKQIDYGKNTLAYDRFIAACPREQRKKGDPMTPLIRQKCSKRSFMGQVTSWKKKVYAYVAELDKDVGQG 123
+ D HRL+QRQKQIDYGKNTL Y R++ P+++R+KGDP TP + SKR+F G + W+++++ Y + D+D G G
Sbjct: 52 DLDDHRLAQRQKQIDYGKNTLGYQRYLQLIPKDKRQKGDPQTPDMHLNNSKRAFEGLIKVWRRQLHKYDQDGDEDAGPG 130
BLAST of Ggra3414.t1 vs. uniprot
Match: A0A388KFE1 (SLBP_RNA_bind domain-containing protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388KFE1_CHABU) HSP 1 Score: 90.5 bits (223), Expect = 1.600e-18 Identity = 44/78 (56.41%), Postives = 55/78 (70.51%), Query Frame = 0
Query: 45 ETDSHRLSQRQKQIDYGKNTLAYDRFIAACPREQRKKGDPMTPLIRQKCSKRSFMGQVTSWKKKVYAYVAELD--KDV 120
ETD HR+SQRQKQID+GKNTL Y R+ PR++RK+GDP TP Q CSKRS+ GQV W++ ++ Y D KDV
Sbjct: 54 ETDKHRISQRQKQIDFGKNTLGYGRYFELVPRKKRKRGDPQTPDPYQVCSKRSWDGQVRKWRRLLHEYDPPSDGEKDV 131
BLAST of Ggra3414.t1 vs. uniprot
Match: A0A2K1JFW8 (SLBP_RNA_bind domain-containing protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1JFW8_PHYPA) HSP 1 Score: 91.7 bits (226), Expect = 1.010e-17 Identity = 45/88 (51.14%), Postives = 57/88 (64.77%), Query Frame = 0
Query: 44 IETDSHRLSQRQKQIDYGKNTLAYDRFIAACPREQRKKGDPMTPLIRQKCSKRSFMGQVTSWKKKVYAYVAELDKDVGQGNPPEIDDE 131
+E D HRL QRQKQIDYGKNTL Y+R+I PR QR K P TP IRQ CSKRS+ GQ+ W++ ++ Y +PP+ +DE
Sbjct: 426 VELDPHRLCQRQKQIDYGKNTLGYERYIELVPRYQRTKAHPRTPDIRQVCSKRSWDGQIRKWRRLLHEY-----------DPPKGEDE 502
BLAST of Ggra3414.t1 vs. uniprot
Match: E1ZHQ3 (SLBP_RNA_bind domain-containing protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZHQ3_CHLVA) HSP 1 Score: 91.3 bits (225), Expect = 1.620e-17 Identity = 51/106 (48.11%), Postives = 67/106 (63.21%), Query Frame = 0
Query: 45 ETDSHRLSQRQKQIDYGKNTLAYDRFIAACPREQR-KKGDPMTPLIRQKCSKRSFMGQVTSWKKKVYAY----------VAELDKDVG--QGNPP----EIDDEFK 133
ETD HRL+QRQKQ+D GKNTL Y R+ A PRE+R KK DPMTP + Q CSKR+F GQV W+++++A+ + + DVG NPP E D+F+
Sbjct: 600 ETDPHRLAQRQKQLDLGKNTLGYQRYRQAVPRERRNKKTDPMTPDVYQMCSKRAFEGQVKKWRRQLHAWDPPEDGGEPALLPVHSDVGGLASNPPPPAGEPSDDFE 705
BLAST of Ggra3414.t1 vs. uniprot
Match: D7FLR7 (Histone hairpin binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLR7_ECTSI) HSP 1 Score: 90.9 bits (224), Expect = 2.360e-17 Identity = 40/81 (49.38%), Postives = 57/81 (70.37%), Query Frame = 0
Query: 36 ERFALANGIETDSHRLSQRQKQIDYGKNTLAYDRFIAACPREQRKKGDPMTPLIRQKCSKRSFMGQVTSWKKKVYAYVAEL 116
E A+ E D HR++QRQKQID+GKNT YDR++AA PR +R +GDP TP +K SKR + GQ+ SW+++++ Y E+
Sbjct: 909 EALKFASDREEDPHRIAQRQKQIDFGKNTSGYDRYLAAVPRNKRSRGDPKTPNKEKKMSKRRWDGQIRSWRRQLHEYDVEV 989
BLAST of Ggra3414.t1 vs. uniprot
Match: A0A2K1JXB1 (SLBP_RNA_bind domain-containing protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1JXB1_PHYPA) HSP 1 Score: 90.5 bits (223), Expect = 2.540e-17 Identity = 45/92 (48.91%), Postives = 58/92 (63.04%), Query Frame = 0
Query: 44 IETDSHRLSQRQKQIDYGKNTLAYDRFIAACPREQRKKGDPMTPLIRQKCSKRSFMGQVTSWKKKVYAYVAELDKDVGQGNPPEIDDEFKLD 135
+E D HRL QRQKQIDYGKNTL Y+R+I PR +R K P TP IRQ CSKRS+ GQ+ W++ ++ Y +PP+ +DE D
Sbjct: 426 VEMDPHRLCQRQKQIDYGKNTLGYERYIEMVPRYKRTKSHPRTPDIRQVCSKRSWDGQIRKWRRLLHEY-----------DPPKGEDEEDSD 506 The following BLAST results are available for this feature:
BLAST of Ggra3414.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Ggra3414.t1 ID=Ggra3414.t1|Name=Ggra3414.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=230bpback to top |