Ggra3407.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra3407.t1
Unique NameGgra3407.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length129
Homology
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BLAST of Ggra3407.t1 vs. uniprot
Match: A0A2V3IRU1 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRU1_9FLOR)

HSP 1 Score: 208 bits (529), Expect = 2.190e-67
Identity = 103/126 (81.75%), Postives = 114/126 (90.48%), Query Frame = 0 
Query:    1 MGQLVRSVAAARQAKELFKALQKVTVIANPFDYRATTAREFLRRVRTPPVKRSNPKLQTELTISEEYGNPTVELLYGDGFKQKIHTSGLKIMDIMDEVERVARWKGDGAQNPFEKLREERAKFLGL 126
            MGQLVRSVAA+RQAKELFKALQKV V  NPFD+RATTAREFLRRVRTPPVK++NPKL+TEL +SEEYGN  +ELLY DG KQ+IHTSG+KI+DI+DEVER ARWKGDGAQNPF KLRE RAK LGL
Sbjct:    1 MGQLVRSVAASRQAKELFKALQKVNVTVNPFDHRATTAREFLRRVRTPPVKKANPKLKTELILSEEYGNANIELLYADGHKQRIHTSGMKIVDIIDEVERFARWKGDGAQNPFGKLREARAKELGL 126
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BLAST of Ggra3407.t1 vs. uniprot
Match: M1V6K7 (Uncharacterized protein n=2 Tax=cellular organisms TaxID=131567 RepID=M1V6K7_CYAM1)

HSP 1 Score: 65.5 bits (158), Expect = 3.900e-11
Identity = 33/75 (44.00%), Postives = 49/75 (65.33%), Query Frame = 0 
Query:    1 MGQLVRSVAAARQAKELFKALQKVTVIANPFDYRATTAREFLRRVRTPPVKRSNPKLQTELTISEEYGNPTVELL 75
            MGQL  ++   R    LF+A+ K  V  +P+DYR+ +AREFLRRV +P V+R+NP+L  E T+ +  G+   EL+
Sbjct:    1 MGQLGVALRTLRSNVNLFRAIAKCQVAFDPYDYRSVSAREFLRRVNSPRVRRANPRLVVEATVRDGGGSGGAELV 75
The following BLAST results are available for this feature:
BLAST of Ggra3407.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IRU12.190e-6781.75Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
M1V6K73.900e-1144.00Uncharacterized protein n=2 Tax=cellular organisms... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.30.10Glutaredoxincoord: 9..115
e-value: 4.4E-20
score: 73.4
IPR019716Ribosomal protein L53, mitochondrialPFAMPF10780MRP_L53coord: 29..79
e-value: 6.8E-9
score: 35.7
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 21..103

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000905_piloncontigtig00000905_pilon:245074..245627 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra3407.t1Ggra3407.t1Gracilaria gracilis GNS1m malemRNAtig00000905_pilon 245074..245627 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra3407.t1 ID=Ggra3407.t1|Name=Ggra3407.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=129bp
MGQLVRSVAAARQAKELFKALQKVTVIANPFDYRATTAREFLRRVRTPPV
KRSNPKLQTELTISEEYGNPTVELLYGDGFKQKIHTSGLKIMDIMDEVER
VARWKGDGAQNPFEKLREERAKFLGLKK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019716Ribosomal_L53_mit
IPR036249Thioredoxin-like_sf