Ggra3401.t1 (polypeptide) Gracilaria gracilis GNS1m male
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Overview
Homology
BLAST of Ggra3401.t1 vs. uniprot
Match: A0A2V3IFP8 (Histone deacetylase complex subunit SAP30 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFP8_9FLOR) HSP 1 Score: 122 bits (307), Expect = 6.550e-33 Identity = 72/92 (78.26%), Postives = 79/92 (85.87%), Query Frame = 0
Query: 1 MTVSKRSA-KLPHK--REHKLALATTCVDLSKLRKASLKRYKKHFKLDVKADSKTELVEAVRRHFAQMPVRELDVAREFHSLWRLRAGRRVA 89
MT SKR+A KL K + KL+L T VDLSKLRKASLKRYKKHFKLDVKADSK+EL+EAV RHFAQMPVRE+DVAR+FHS WRLRAGRRVA
Sbjct: 1 MTASKRAAAKLAAKPLSDSKLSLKTY-VDLSKLRKASLKRYKKHFKLDVKADSKSELLEAVGRHFAQMPVREVDVARDFHSFWRLRAGRRVA 91
BLAST of Ggra3401.t1 vs. uniprot
Match: A0A1X6NX01 (SAP30_Sin3_bdg domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NX01_PORUM) HSP 1 Score: 70.5 bits (171), Expect = 4.380e-13 Identity = 37/69 (53.62%), Postives = 48/69 (69.57%), Query Frame = 0
Query: 25 VDLSKLRKASLKRYKKHFKLDVKADSKTELVEAVRRHFAQMPVRELDVAREFHSLWRLRAGRRVAAHAS 93
VDLSKL K SLKRY HF ++ + ++K EL++ V HFAQMPV+EL VAR+FH+ R G+RV S
Sbjct: 25 VDLSKLHKNSLKRYLTHFGIEARGNTKVELLKIVTVHFAQMPVQELAVARDFHNFTRSDRGKRVLEKGS 93
BLAST of Ggra3401.t1 vs. uniprot
Match: A0A5J4YN18 (SAP30_Sin3_bdg domain-containing protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YN18_PORPP) HSP 1 Score: 62.4 bits (150), Expect = 1.300e-9 Identity = 38/78 (48.72%), Postives = 49/78 (62.82%), Query Frame = 0
Query: 20 LATTCVDLSKLRKASLKRYKKHFKLDVKAD--SKTELVEAVRRHFAQMPVRELDVAREFHSLWRLRAGRRVAAHASTL 95
+A TC+DLS+LRK+SLKRYK+HFK+ + SK ELV AV HFA+M V E +V F L R A ++TL
Sbjct: 10 VAPTCIDLSRLRKSSLKRYKRHFKISMSVSNPSKAELVAAVSSHFAEMRVLEHEV---FDELARFFAAEHQKLQSATL 84 The following BLAST results are available for this feature:
BLAST of Ggra3401.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 3
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Ggra3401.t1 ID=Ggra3401.t1|Name=Ggra3401.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=149bpback to top |