Ggra3369.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra3369.t1
Unique NameGgra3369.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length656
Homology
BLAST of Ggra3369.t1 vs. uniprot
Match: A0A2V3IQL3 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQL3_9FLOR)

HSP 1 Score: 763 bits (1971), Expect = 3.280e-269
Identity = 391/642 (60.90%), Postives = 475/642 (73.99%), Query Frame = 0
Query:   11 PRSPPXXXXXXXQPRGAFILSFWVPFDVWSRIAAFLTAVSDLNSFLKVCRAAYNAVCTTQAPLYKDVCHHFRQRQFCIPADLVDKVLMAHVVPPDGQSLVMFLDETQSGNGIELVWIRGTHIRRVQLGLDTVSASTVSNIRFSPDGSRIAFLITLAHGNLIAEDLDPLHRLRGWESHTEVRGHPYDITYEPCEDCTVQIVSLVSDSCGYPHDLIVHTFTHVFVPEYGFDMVWRGTSQKPELAFAAMLHSTAGAATYLVRWKTFASPTETNFVFMACIDGASIELLHDKRFAMLNYEATRCTSRIELGKDAQFIFFDTISKFGVLRFDQVEDAASAKVTRADLPNDPIIS-RVCCAS------TATTSETRGQHN-----------CAGQKRSAGNS--DKCNLKVHNGREHCCSHNDEVARTSRMAPNGNLLCSVVCVHCGPHSRNGRRVSQRHIEMRSSVSGRLLYRQLIPRTFKTSRRRINHIHIPYEKSDNVTRCTIGFSEDSLLLFIWDTLFTNTEVVASKTLPHVYEAETGRLVQDFNEIASTVSYDQIQTAPNGLTLYGTRWAKAKVNMDAIDVVSGRVLKTEVLADGLAAPAEFSSDSVYILPNQNLVAMSRGRLDSFWESTRGALGCEWRSERR 632
            P SPP       QPRGAFI S W+PFD+W RIA+++T++SDL SFL VCRAA  AVC TQAP ++ V H+FR   F IP DL+DKV M HVVPP G+SL++F+D+  S NG++L W+RG+ +RR+ LGLD V ASTV+NIRFSPDG+RIAFLITLAHG LIAE LDPLHRLRGWES TE+ G  +DIT  PCEDCTVQI  L +D  G+PHDL++HTFTHVFVPEYGFDMVWRGTS KPELAFAAMLHS+AGAATYLVRWKTFASP E+NFVFMA IDGASI+L+HDKR AML+Y++TRCTSRIE+G+DAQ IFFDT SKFGVLRFDQV+DAAS++VTRADLPN+P I+ R  CA       +     +RG H            C  ++  AGNS  ++ + +     +   S + +VARTSRM+P+G LLCSV+C       ++GRR   R IEMRS+++GRLLYR  IPR  +T R    H   P+EKSD V R TI FS DS L+ IWDT F++  V  SK LP+VYE ETGRLVQDF  I ST++YDQ+QTAP+ LT+YGTR ++ ++ MDAIDV+SG VLKTE L   L  P  F+   V+  PNQ L  MSRG LD+ WE+TRG LGC W+SERR
Sbjct:   13 PPSPPRHNRASSQPRGAFISSHWIPFDIWPRIASYITSISDLTSFLHVCRAAQKAVCLTQAPRHQSVRHNFRLCTFYIPTDLLDKVRMVHVVPPHGESLILFVDDPSSSNGVDLAWLRGSRLRRISLGLDAVPASTVTNIRFSPDGTRIAFLITLAHGALIAEGLDPLHRLRGWESQTEIFGETFDITCHPCEDCTVQIADLEADDLGFPHDLVLHTFTHVFVPEYGFDMVWRGTSDKPELAFAAMLHSSAGAATYLVRWKTFASPNESNFVFMAVIDGASIDLIHDKRHAMLSYKSTRCTSRIEIGEDAQIIFFDTTSKFGVLRFDQVDDAASSRVTRADLPNNPFINPRSSCAMGMEPQYSEQGDSSRGLHRVRTVQRTYREGCLSKQLHAGNSLTNRTSGRARARGDDMGSPDHDVARTSRMSPDGMLLCSVICNPNARIFKSGRRSPHRLIEMRSTLTGRLLYRHHIPRPRRTLRIP-KHDSTPFEKSDYVARRTITFSNDSRLVLIWDTYFSSVVVSTSKRLPYVYEVETGRLVQDFCAIGSTIAYDQVQTAPDALTVYGTRVSRNRIVMDAIDVLSGLVLKTEPLTGDLMVPTCFAGHFVFTFPNQKLAIMSRGWLDTLWETTRGYLGCGWKSERR 653          
BLAST of Ggra3369.t1 vs. uniprot
Match: R7QGL7 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QGL7_CHOCR)

HSP 1 Score: 513 bits (1320), Expect = 8.500e-172
Identity = 276/614 (44.95%), Postives = 387/614 (63.03%), Query Frame = 0
Query:   26 GAFILSFWVPFDVWSRIAAFLTAVSDLNSFLKVCRAAYNAVCTTQAPLYKDVCHHFRQRQFCIPADLVDKVLMAHVVPPDGQSLVMFLDETQSGNGIELVWIRGTHIRRVQLGLDTVSASTVSNIRFSPDGSRIAFLITLAHGNLIAEDLDPLHRLRGWESHTEVRGHPYDITYEPCEDCTVQIVSLVSDSCGYPHDLIVHTFTHVFVPEYGFDMVWRGT---SQKPELAFAAMLHSTAGAATYLVRWKTFASPTETNFVFMACIDGASIELLHDKRFAMLNYEATRCTSRIELGKDAQFIFFDTISKFGVLRFDQVEDAASAKVTRADLPNDPIISRVCCASTATTSETRGQHNCAGQKRSAGNSDKCNLKV-------HNGREHCCSHNDEVARTSRMAPNGNLLCSVVCVHCGPHSRNGRRVSQ-RHIEMRSSVSGRLLYRQLIPRTFKTSRRRINHIHIPYEKSDNVTRCTIGFSEDSLLLFIWDTLFTNTEVVASKTLPHVYEAETGRLVQDFNEIASTVSYDQIQTAPNGLTLYGTRWAKAKVNMDAIDVVSGRVLKTEVLADGLAAPAEFSSDSVYILPNQNLVAMSRGRLDSFWESTRGALGCEWR 628
            GA     W+P DVW+R++AF+  V   ++   VC AA   V   +A   + +   FR R + +P  L D+VLM H +   G+ LV+F+DET  G+G+E+ W++   ++ + LGL+ V AS  +NIRF+PDG  +A L+TLAHG ++ E+ DPL RLRGW    +       I Y PCEDCTVQ+V  +    G   DL++HTF+HVFVPEYGFDMVWRG+   S + ELAFAAMLHS  GAATYLVRWKTF +P  +NF+FMACIDGA  E+L DKR AML    T CTSRIEL KDA+ IFFDT+SKFG+LRFDQV++ + AKVTRADL N PI   +   +       RG+H     + S   +    ++        H  R     +N    R +RM+P+G+LLCSV+        R G R ++ +H+EMRSS+ GRLL+R +I R      ++ + + +  EKS ++   T+ FS+DS LL +WD   T+T      TLP V ++ TG  +QDF E++S V Y+ +Q + +G  +YGTR A+ ++ MDA+DV++GRVLKT  +   +  P  FS+ SVY++PN+ +  ++RG+L+  WES+RG+ GC WR
Sbjct:    7 GARACGQWIPADVWARLSAFVRDVPAQHALRLVCPAAAAGVADARAAFLQTLRKTFRLRAYSLPDSLADRVLMVHPMAGGGEGLVLFVDETDIGSGVEIAWLQSGSLKSIALGLEAVPASAATNIRFAPDGRSVAMLVTLAHGTMVEENTDPLKRLRGWPVVEDC------IEYTPCEDCTVQVVDFLYPERGRSRDLVLHTFSHVFVPEYGFDMVWRGSAGKSDRQELAFAAMLHSDDGAATYLVRWKTFRNPRTSNFIFMACIDGACKEMLWDKRNAMLRSPHTICTSRIELAKDARHIFFDTMSKFGILRFDQVDNPSVAKVTRADLDNTPISPVL--RAPPLPKIARGRHEACCHRDSPSGTPVPKMRPSFATYGDHQRRAAKVLNN--ATRIARMSPDGSLLCSVIDTFRSNGERRGLRSTRLKHVEMRSSLCGRLLFRNVIVRQPDLCCQKPDRLEL--EKSGDIAHNTLSFSDDSSLLVVWDAFLTSTVCEVYHTLPLVLDSRTGGTIQDFEELSS-VRYEGMQMSSDGQIIYGTRMAEDRIVMDAVDVLTGRVLKTVNVTGQVHRPPAFSAHSVYLMPNRYIHTVARGQLEVLWESSRGSAGCGWR 607          
The following BLAST results are available for this feature:
BLAST of Ggra3369.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IQL33.280e-26960.90Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QGL78.500e-17244.95Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000189_piloncontigtig00000189_pilon:136485..138452 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra3369.t1Ggra3369.t1Gracilaria gracilis GNS1m malemRNAtig00000189_pilon 136485..138452 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra3369.t1 ID=Ggra3369.t1|Name=Ggra3369.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=656bp
MIRHDPSPPPPRSPPRHAPPPPQPRGAFILSFWVPFDVWSRIAAFLTAVS
DLNSFLKVCRAAYNAVCTTQAPLYKDVCHHFRQRQFCIPADLVDKVLMAH
VVPPDGQSLVMFLDETQSGNGIELVWIRGTHIRRVQLGLDTVSASTVSNI
RFSPDGSRIAFLITLAHGNLIAEDLDPLHRLRGWESHTEVRGHPYDITYE
PCEDCTVQIVSLVSDSCGYPHDLIVHTFTHVFVPEYGFDMVWRGTSQKPE
LAFAAMLHSTAGAATYLVRWKTFASPTETNFVFMACIDGASIELLHDKRF
AMLNYEATRCTSRIELGKDAQFIFFDTISKFGVLRFDQVEDAASAKVTRA
DLPNDPIISRVCCASTATTSETRGQHNCAGQKRSAGNSDKCNLKVHNGRE
HCCSHNDEVARTSRMAPNGNLLCSVVCVHCGPHSRNGRRVSQRHIEMRSS
VSGRLLYRQLIPRTFKTSRRRINHIHIPYEKSDNVTRCTIGFSEDSLLLF
IWDTLFTNTEVVASKTLPHVYEAETGRLVQDFNEIASTVSYDQIQTAPNG
LTLYGTRWAKAKVNMDAIDVVSGRVLKTEVLADGLAAPAEFSSDSVYILP
NQNLVAMSRGRLDSFWESTRGALGCEWRSERRSTPFLSRYDSMVRRKQPS
ISEIS*
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