Ggra3350.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra3350.t1
Unique NameGgra3350.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length197
Homology
BLAST of Ggra3350.t1 vs. uniprot
Match: A0A2V3IG66 (N-acetylglucosaminyldiphosphodolichol N-acetylglucosaminyltransferase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IG66_9FLOR)

HSP 1 Score: 208 bits (530), Expect = 2.280e-65
Identity = 113/166 (68.07%), Postives = 129/166 (77.71%), Query Frame = 0
Query:   17 LLVTVGSTQFAALTDFVALPSTLADLHALGISHVTLQHGSHTPTLPAPGERPPVLQPLRYSPQLPDMLRHADVVVSHAGAGTVLEAVDARRPLVVVVNDALMHNHQTELADAMQRCGCCVVVSAHSLPDRLVPAIKQVLAAAHSRHASPPPRATGVFAAIVAEELA 182
            LLVTVGSTQFAAL+DF+   STL+ L  LG + +TLQHGSHTPTLPAP   PP LQPLRY P L  +LR A V+VSHAGAGTVLEAV+A RPLVVVVNDAL+HNHQTELADAM   GCC+VV A+ L   L+PAI+++L    +  A PPPR  GVFA IVAEELA
Sbjct:   32 LLVTVGSTQFAALSDFMVQASTLSALRDLGFAQLTLQHGSHTPTLPAPSALPPRLQPLRYHPDLRALLRQAHVIVSHAGAGTVLEAVEAARPLVVVVNDALLHNHQTELADAMHAAGCCIVVPANQLDRNLIPAIERLLRDDGANRA-PPPRVRGVFARIVAEELA 196          
BLAST of Ggra3350.t1 vs. uniprot
Match: R7QF63 (N-acetylglucosaminyldiphosphodolichol N-acetylglucosaminyltransferase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QF63_CHOCR)

HSP 1 Score: 120 bits (300), Expect = 6.120e-31
Identity = 73/163 (44.79%), Postives = 103/163 (63.19%), Query Frame = 0
Query:   18 LVTVGSTQFAALTDFVALPSTLADLHALGISHVTLQHGSHTPTLPAPGERPPV-LQPLRYSPQLPDMLRHADVVVSHAGAGTVLEAVDARRPLVVVVNDALMHNHQTELADAMQRCGCCVVVSAHSLPDRLVPAIKQVLAAAHSRHASPPPRATGVFAAIVAE 179
            LVTVGST F  LTD++     LA LHALG+  +T+QHG+    L A  E  P+ ++   Y+P L   L  AD+V+SHAGAGT+ E +D ++ ++VVVNDALM NHQTELA AM   GCCV+++A+ L +R   A ++ +         PP +    FAA++A+
Sbjct:    6 LVTVGSTSFPVLTDYMLTSPALAHLHALGVHTLTVQHGAAA--LQAVPESCPLRVEAFPYTPDLAAHLDVADLVLSHAGAGTISEGLDKKKRMLVVVNDALMDNHQTELAAAMAERGCCVMITANQLRERFHDAAEKAINLTEE-DICPPEKNQTAFAALLAQ 165          
BLAST of Ggra3350.t1 vs. uniprot
Match: A9UQA8 (N-acetylglucosaminyldiphosphodolichol N-acetylglucosaminyltransferase n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9UQA8_MONBE)

HSP 1 Score: 95.9 bits (237), Expect = 4.880e-22
Identity = 56/125 (44.80%), Postives = 75/125 (60.00%), Query Frame = 0
Query:   19 VTVGSTQFAALTDFVALPSTLADLHALGISHVTLQHGSHTPTLPAPGERPPVLQPLR-----YSPQLPDMLRHADVVVSHAGAGTVLEAVDARRPLVVVVNDALMHNHQTELADAMQRCG---CC 135
            VTVG+TQF +LTD V     L  LH  GI+ + +QHG      PAP     +   LR     + P L   + +AD+V+ HAGAGT+LE ++A +P+++VVN+ LMHNHQ ELA AM   G   CC
Sbjct:    5 VTVGTTQFQSLTDAVVAEPVLEALHRDGITELHIQHGR----APAPEPATKIPDGLRIETFDFKPSLQQEILNADLVIGHAGAGTILETLEAGKPMIIVVNEELMHNHQIELAQAMADSGHALCC 125          
BLAST of Ggra3350.t1 vs. uniprot
Match: A0A4P9XE17 (UDP-N-acetylglucosamine transferase subunit ALG13 n=1 Tax=Caulochytrium protostelioides TaxID=1555241 RepID=A0A4P9XE17_9FUNG)

HSP 1 Score: 93.2 bits (230), Expect = 2.690e-20
Identity = 74/182 (40.66%), Postives = 95/182 (52.20%), Query Frame = 0
Query:   17 LLVTVGSTQFAALTDFVALPSTLADLHALGISHVTLQHG-SHTPTLPAPGER----PPVLQPLR-----------YSPQLPDMLRHADVVVSHAGAGTVLEAVDARRPLVVVVNDALMHNHQTELADAMQRCGCCVVVSAHSLPDRLVPAIKQVLAAAHSRHASPPPRATGVFAAIVAEELA 182
            L VTVG+T+F AL D V  P+ LA L   G +H+TLQHG S  PT  A   R    P  +  +            Y+  L   L  AD VVSHAGAG++LEA+ A +PL+V VN AL  NHQ ELA+ +   G   V  A S P  L   +  V+A       +PPP A   F ++VA  L+
Sbjct:   12 LFVTVGTTRFDALADAVGRPAFLAALRRAGFTHLTLQHGRSPRPTALASAARNAADPDAVVDVAEVEGVHVTCYAYAADLAADLHAADAVVSHAGAGSILEALRAGKPLLVAVNTALQDNHQRELAEHLAAQGYLAVADAVS-PAALAAGVAAVVARPRMPWPTPPPGAAA-FRSLVAGLLS 191          
BLAST of Ggra3350.t1 vs. uniprot
Match: A0A3R7KHJ4 (N-acetylglucosaminyldiphosphodolichol N-acetylglucosaminyltransferase n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7KHJ4_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 5.230e-20
Identity = 55/131 (41.98%), Postives = 78/131 (59.54%), Query Frame = 0
Query:   19 VTVGSTQFAALTDFVALPSTLADLHALGISHVTLQ--HGSHTPTLPAPGERPPVLQPLRYSPQLPDMLRHADVVVSHAGAGTVLEAVDARRPLVVVVNDALMHNHQTELADAMQRCGCCVVVSAHSLPDRL 147
            VTVG+T+F AL + +   + L+ L A G + + LQ  HG H P +  PG     L   R+ PQ    +  AD+++SHAGAG++++A+  ++ LVVVVN  LM NHQTELA+AM     C+  S   L D L
Sbjct:    5 VTVGTTKFEALIEALDTDACLSALVARGFNSLRLQIGHGDHIPRMSFPGLE---LSYYRHDPQYKQDVNRADLIISHAGAGSIMDALALKKTLVVVVNTQLMDNHQTELAEAMAEQNYCLQTSVQGLEDVL 132          
BLAST of Ggra3350.t1 vs. uniprot
Match: W5JGI3 (N-acetylglucosaminyldiphosphodolichol N-acetylglucosaminyltransferase n=6 Tax=Nyssorhynchus TaxID=44543 RepID=W5JGI3_ANODA)

HSP 1 Score: 91.3 bits (225), Expect = 9.160e-20
Identity = 54/117 (46.15%), Postives = 74/117 (63.25%), Query Frame = 0
Query:   17 LLVTVGSTQFAALTDFVALPSTLADLHALGISHVTLQHGS-HTPTLPAPGERPPV-LQPLRYSPQLPDMLRHADVVVSHAGAGTVLEAVDARRPLVVVVNDALMHNHQTELADAMQR 131
            + VTVG+TQF  L   V     L  L  LG   +T+Q G   TP LP   +R  + L      P + D ++ AD+V+SHAGAG+ +EA++A RPLVVVVN++LM+NHQTELA+ + R
Sbjct:    9 VFVTVGTTQFEELVGSVLSTEVLQQLETLGCETLTIQRGKGSTPDLPDIQKRTKIRLACYDLKPTIGDDIKQADLVISHAGAGSCIEALEAGRPLVVVVNESLMNNHQTELAERLSR 125          
BLAST of Ggra3350.t1 vs. uniprot
Match: C1E0Y0 (Glycosyltransferase family 1 protein n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1E0Y0_MICCC)

HSP 1 Score: 90.1 bits (222), Expect = 2.040e-19
Identity = 52/117 (44.44%), Postives = 72/117 (61.54%), Query Frame = 0
Query:   17 LLVTVGSTQFAALTDFVALPSTLADLHALGISHVTLQHGSHTPTLPAPGERPPVLQPLRYSPQLPDMLRHADVVVSHAGAGTVLEAVDARRPLVVVVNDALMHNHQTELADAMQRCG 133
            + VTVG+TQF +L + +  P     L   G   V +Q G  T  LP P E    ++   ++P L D +  AD+VVSHAG+G+V EA+  R+PL+VVVNDALM NHQ ELA+ + + G
Sbjct:    8 VFVTVGTTQFDSLIEALDTPECADALRGNGYGSVVIQRGKGTRELPTPLE----VRVFDFAPSLADEMLAADLVVSHAGSGSVFEALGMRKPLLVVVNDALMDNHQAELAEELGKRG 120          
BLAST of Ggra3350.t1 vs. uniprot
Match: A0A1X6NSW8 (Glyco_tran_28_C domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NSW8_PORUM)

HSP 1 Score: 90.1 bits (222), Expect = 2.550e-19
Identity = 65/167 (38.92%), Postives = 87/167 (52.10%), Query Frame = 0
Query:   18 LVTVGSTQFAALTDFVALPSTLADLHALGISHVTLQHGSHT--PTLPAPGERPPVLQPLRYSPQLPDMLRHADVVVSHAGAGTVLEAVDARRPLVVVVNDALMHNHQTELADAMQRCGCCVVVSAHSLPDRLVPAIKQVLAAAHSRHASPPPRATGVFAAIVAEELA 182
            LVTVGST F AL      P+  A L A G + + +Q+G     PT+ +    P  +   R+ P L   +  A +V+SHAGAG++LEA+    P +VVVN ALM+NHQ ELA AM   G   + S  SL +        V+ A       P P   GVF  ++ EELA
Sbjct:    6 LVTVGSTSFDALVASATTPAVRAALAARGFTRLVIQYGRGAVPPTVESASSPPLEIVTYRFKPSLAGDMAVAGLVISHAGAGSILEALRGGVPTIVVVNTALMNNHQAELAGAMADRGHLALASPVSLAE--------VVGAWDWDARVPLPPPAGVFGQVLGEELA 164          
BLAST of Ggra3350.t1 vs. uniprot
Match: A0A5D6Y5H2 (N-acetylglucosaminyldiphosphodolichol N-acetylglucosaminyltransferase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y5H2_9STRA)

HSP 1 Score: 89.4 bits (220), Expect = 5.820e-19
Identity = 60/134 (44.78%), Postives = 76/134 (56.72%), Query Frame = 0
Query:   17 LLVTVGSTQFAALTDFVALPSTLADLHALGISHVTLQ--HGSHTPTLPAPGERPPV-LQPLRYSPQLPDMLRHADVVVSHAGAGTVLEAVDARRPLVVVVNDALMHNHQTELADAMQRCGCCVVVSAHSLPDRL 147
            + VTVG+T+F AL   V     LA L A G S V LQ  HG +TP        P V +   R+S Q    +  AD+V+SHAGAG++++A+  R+PLVVVVN  LM NHQ ELADAM     CV  +   L   L
Sbjct:    3 VFVTVGTTKFDALVRAVDSDECLAALAARGYSRVLLQIGHGEYTPLARRADAAPGVQVTHYRHSAQYKQDVAGADLVISHAGAGSIMDALALRKPLVVVVNTLLMDNHQAELADAMAEQHYCVSTTCDELAHTL 136          
BLAST of Ggra3350.t1 vs. uniprot
Match: A0A0L0T9Z2 (UDP-N-acetylglucosamine transferase subunit ALG13 n=2 Tax=Allomyces macrogynus (strain ATCC 38327) TaxID=578462 RepID=A0A0L0T9Z2_ALLM3)

HSP 1 Score: 89.0 bits (219), Expect = 6.130e-19
Identity = 66/167 (39.52%), Postives = 91/167 (54.49%), Query Frame = 0
Query:   19 VTVGSTQFAALTDFVALPSTLADLHALGISHVTLQHGSHTPTLPAPGERPPVLQPLRYSPQLPDMLRHADVVVSHAGAGTVLEAVDA---RRPLVVVVNDALMHNHQTELADAMQRCGCCVVVSAHSLPDRLVPAIKQVLAAAHSRHASP-PPRATGVFAAIVAEEL 181
            VTVG+T F AL D +  P TLA L  LG + +T+Q G++ PT+P     P  ++   Y+P L D +  A +VV+HAGAG +LEA+ A    R ++ VVN ALM NHQ ELA  +   G  V     SL         Q LAA H     P P +A   F +++A+ +
Sbjct:    5 VTVGTTTFPALVDSILSPPTLAQLAKLGYTSLTIQAGAYEPTIPP--NAPLSVRVFAYAPSLTDEVARAHLVVTHAGAGCLLEALRAPGGERKVIAVVNGALMDNHQRELALELHLRGHLVSCEPESLD--------QALAAVHHVALIPFPLQAKDRFPSVLAQVI 161          
The following BLAST results are available for this feature:
BLAST of Ggra3350.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IG662.280e-6568.07N-acetylglucosaminyldiphosphodolichol N-acetylgluc... [more]
R7QF636.120e-3144.79N-acetylglucosaminyldiphosphodolichol N-acetylgluc... [more]
A9UQA84.880e-2244.80N-acetylglucosaminyldiphosphodolichol N-acetylgluc... [more]
A0A4P9XE172.690e-2040.66UDP-N-acetylglucosamine transferase subunit ALG13 ... [more]
A0A3R7KHJ45.230e-2041.98N-acetylglucosaminyldiphosphodolichol N-acetylgluc... [more]
W5JGI39.160e-2046.15N-acetylglucosaminyldiphosphodolichol N-acetylgluc... [more]
C1E0Y02.040e-1944.44Glycosyltransferase family 1 protein n=1 Tax=Micro... [more]
A0A1X6NSW82.550e-1938.92Glyco_tran_28_C domain-containing protein n=1 Tax=... [more]
A0A5D6Y5H25.820e-1944.78N-acetylglucosaminyldiphosphodolichol N-acetylgluc... [more]
A0A0L0T9Z26.130e-1939.52UDP-N-acetylglucosamine transferase subunit ALG13 ... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007235Glycosyl transferase, family 28, C-terminalPFAMPF04101Glyco_tran_28_Ccoord: 16..160
e-value: 1.1E-22
score: 80.8
NoneNo IPR availableGENE3D3.40.50.2000Glycogen Phosphorylase B;coord: 12..180
e-value: 1.5E-33
score: 118.1
NoneNo IPR availablePANTHERPTHR12867:SF6ASPARAGINE LINKED GLYCOSYLATION (ALG) HOMOLOG, NEMATODEcoord: 16..162
NoneNo IPR availableSUPERFAMILY53756UDP-Glycosyltransferase/glycogen phosphorylasecoord: 12..162
IPR039042UDP-N-acetylglucosamine transferase subunit Alg13-likePANTHERPTHR12867GLYCOSYL TRANSFERASE-RELATEDcoord: 16..162

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000189_piloncontigtig00000189_pilon:81480..82070 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra3350.t1Ggra3350.t1Gracilaria gracilis GNS1m malemRNAtig00000189_pilon 81480..82070 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra3350.t1 ID=Ggra3350.t1|Name=Ggra3350.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=197bp
MAARGGDDDDDAAGTTLLVTVGSTQFAALTDFVALPSTLADLHALGISHV
TLQHGSHTPTLPAPGERPPVLQPLRYSPQLPDMLRHADVVVSHAGAGTVL
EAVDARRPLVVVVNDALMHNHQTELADAMQRCGCCVVVSAHSLPDRLVPA
IKQVLAAAHSRHASPPPRATGVFAAIVAEELAQVRVASPPTHHHPQ*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007235Glyco_trans_28_C
IPR039042Alg13-like