Ggra3301.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra3301.t1
Unique NameGgra3301.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length224
Homology
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BLAST of Ggra3301.t1 vs. uniprot
Match: A0A2V3ISF1 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISF1_9FLOR)

HSP 1 Score: 59.7 bits (143), Expect = 2.660e-7
Identity = 37/75 (49.33%), Postives = 47/75 (62.67%), Query Frame = 0 
Query:  150 YNPLVPRPRPIPRSSTLPSGLRARAFANPVPPPGYGAY-PVHPSRIPRAVSMPYGMSSFARRGYPPNRGPRPLFL 223
            Y    P  R +PRS+ + +GLRA  +AN VPP  Y  + P+  S IPRAVS+PYG+S  ARR Y P+ G   LFL
Sbjct:  149 YRGYAPYRRVLPRSNMIHAGLRAPTYANVVPP--YAMHNPMISSPIPRAVSVPYGISRMARRPYGPHGGSGSLFL 221
The following BLAST results are available for this feature:
BLAST of Ggra3301.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3ISF12.660e-749.33Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 48..75
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 148..162
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 38..174
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 64..78
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 109..144

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000851_piloncontigtig00000851_pilon:630435..631106 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra3301.t1Ggra3301.t1Gracilaria gracilis GNS1m malemRNAtig00000851_pilon 630435..631106 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra3301.t1 ID=Ggra3301.t1|Name=Ggra3301.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=224bp
MAYDLTTLPCPKHANRSKRCTCMSRSALISSRHAAEMAAESAQMARRLAK
RERQLHRRERKLRKLEKALSDTTAQRPARREAKSSPPQQSARRRSSNKKP
AERPVSARHNVSPPSSFPDSASALASPNASFQRHASSSRLPVPHSYQPLY
NPLVPRPRPIPRSSTLPSGLRARAFANPVPPPGYGAYPVHPSRIPRAVSM
PYGMSSFARRGYPPNRGPRPLFL*
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